Uroporphyrin I (BioDeep_00000005941)

 

Secondary id: BioDeep_00001868957

human metabolite Endogenous blood metabolite Volatile Flavor Compounds


代谢物信息卡片


3-[9,14,19-tris(2-carboxyethyl)-5,10,15,20-tetrakis(carboxymethyl)-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl]propanoic acid

化学式: C40H38N4O16 (830.2282708)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(blood) 3.7%

分子结构信息

SMILES: C(CC(=O)O)c1c(CC(=O)O)c2/C=C\3/C(=C(CC(=O)O)C(=N3)/C=c\3/c(CCC(=O)O)c(CC(=O)O)/c(=C/C4=N/C(=C\c1[nH]2)/C(=C4CCC(=O)O)CC(=O)O)/[nH]3)CCC(=O)O
InChI: InChI=1S/C40H38N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-26-19(3-7-35(49)50)23(11-39(57)58)31(43-26)16-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)15-27-18(2-6-34(47)48)22(10-38(55)56)30(42-27)13-25(17)41-29/h13-16,41-42H,1-12H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)

描述信息

Uroporphyrin is the porphyrin produced by oxidation of the methylene bridges in uroporphyrinogen. Uroporphyrins have four acetic acid and four propionic acid side chains attached to their pyrrole rings. The enzyme uroporphyrinogen I synthase catalyzes the formation of hydroxymethylbilane from four molecules of porphobilinogen. Uroporphyrinogen III cosynthase then catalyzes the conversion of hydroxymethylbilane into uroporphyrinogen III. Otherwise, hydroxymethylbilane cyclizes nonenzymatically to form uroporphyrinogen I. Uroporphyrinogen I and III yield their respective uroporphyrins via autooxidation or their respective coproporphyrinogens via decarboxylation. Excessive amounts of uroporphyrin I are excreted in congenital erythropoietic porphyria, and both uroporphyrin I and uroporphyrin III are excreted in porphyria cutanea tarda. Uroporphyrin I and III are the most common isomers. Under certain conditions, uroporphyrin I can act as a phototoxin, a neurotoxin, and a metabotoxin. A phototoxin leads to cell damage upon exposure to light. A neurotoxin causes damage to nerve cells and nerve tissues. A metabotoxin is an endogenously produced metabolite that causes adverse health effects at chronically high levels. Chronically high levels of porphyrins are associated with porphyrias such as porphyria variegate, acute intermittent porphyria, porphyria cutanea tarda, and hereditary coproporphyria (HCP). There are several types of porphyrias (most are inherited). Hepatic porphyrias are characterized by acute neurological attacks (seizures, psychosis, extreme back and abdominal pain, and an acute polyneuropathy), while the erythropoietic forms present with skin problems (usually a light-sensitive blistering rash and increased hair growth). The neurotoxicity of porphyrins may be due to their selective interactions with tubulin, which disrupt microtubule formation and cause neural malformations (PMID: 3441503).
Uroporphyrin is the porphyrin produced by oxidation of the methylene bridges in uroporphyrinogen. They have four acetic acid and four propionic acid side chains attached to the pyrrole rings. Uroporphyrinogen I and III are formed from polypyrryl methane in the presence of uroporphyrinogen III cosynthetase and uroporphyrin I synthetase, respectively. They can yield uroporphyrins by autooxidation or coproporphyrinogens by decarboxylation.Excessive amounts of uroporphyrin I are excreted in congenital erythropoietic porphyria, and both types I and III are excreted in porphyria cutanea tarda.Uroporphyrin I and III are the most common isomers. [HMDB]

同义名列表

15 个代谢物同义名

3-[9,14,19-tris(2-carboxyethyl)-5,10,15,20-tetrakis(carboxymethyl)-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl]propanoic acid; 3-[7,12,17-Tris-(2-carboxy-ethyl)-3,8,13,18-tetrakis-carboxymethyl-22,24-dihydro-porphin-2-yl]-propionic acid; 3-[7,12,17-Tris-(2-carboxy-ethyl)-3,8,13,18-tetrakis-carboxymethyl-22,24-dihydro-porphin-2-yl]-propionate; 3,3,3,3-(3,8,13,18-tetrakis-carboxymethyl-21H,23H-porphine-2,7,12,17-tetrayl)-tetrakis-propionic acid; 3,3,3,3-(3,8,13,18-tetrakis-carboxymethyl-21H,23H-porphine-2,7,12,17-tetrayl)-tetrakis-propionate; 3,3,3,3-(3,8,13,18-tetrakis-carboxymethyl-porphyrin-2,7,12,17-tetrayl)-tetra-propionic acid; 3,3,3,3-(3,8,13,18-tetrakis-carboxymethyl-porphyrin-2,7,12,17-tetrayl)-tetra-propionate; 3,8,13,18-Tetrakis(carboxymethyl)porphyrin-2,7,12,17-tetrapropionic acid; 3,8,13,18-Tetrakis(carboxymethyl)porphyrin-2,7,12,17-tetrapropanoic acid; 3,8,13,18-Tetrakis(carboxymethyl)porphyrin-2,7,12,17-tetrapropionate; 3,8,13,18-Tetrakis(carboxymethyl)porphyrin-2,7,12,17-tetrapropanoate; 2,7,12,17-Porphinetetrapropionic acid; 2,7,12,17-Porphinetetrapropionate; Uroporphyrin I; Uroporphyrin I



数据库引用编号

15 个数据库交叉引用编号

分类词条

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代谢反应

0 个相关的代谢反应过程信息。

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2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

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文献列表

  • Albrecht Pfäfflin. Remarks on the acute intermittent porphyria. Annals of clinical biochemistry. 2009 Jul; 46(Pt 4):347-8; author reply 348. doi: 10.1258/acb.2009.009069. [PMID: 19564164]
  • Ricardo Negroni, Alicia Arechavala, Elena Maiolo. [Clinical cases in medical mycology. Case no. 20]. Revista iberoamericana de micologia. 2006 Jun; 23(2):116-8. doi: 10.1016/s1130-1406(06)70028-6. [PMID: 16854192]
  • C Ged, M Mendez, E Robert, M Lalanne, I Lamrissi-Garcia, P Costet, J Y Daniel, P Dubus, F Mazurier, F Moreau-Gaudry, H de Verneuil. A knock-in mouse model of congenital erythropoietic porphyria. Genomics. 2006 Jan; 87(1):84-92. doi: 10.1016/j.ygeno.2005.08.018. [PMID: 16314073]
  • Peter Bozek, Milan Hutta, Barbora Hrivnáková. Rapid analysis of porphyrins at low ng/l and microg/l levels in human urine by a gradient liquid chromatography method using octadecylsilica monolithic columns. Journal of chromatography. A. 2005 Aug; 1084(1-2):24-32. doi: 10.1016/j.chroma.2005.06.007. [PMID: 16114232]
  • Naomi Shishido, Kenji Nakayama, Masao Nakamura. Porphyrin-induced photooxidation of conjugated bilirubin. Free radical research. 2003 Oct; 37(10):1061-7. doi: 10.1080/10715760310001600381. [PMID: 14703795]
  • Jordi To-Figueras, Dolores Ozalla, Carmen Herrero Mateu. Long-standing changes in the urinary profile of porphyrin isomers after clinical remission of porphyria cutanea tarda. Annals of clinical and laboratory science. 2003; 33(3):251-6. doi: . [PMID: 12956438]
  • Y Ding, B Lin, C W Huie. Binding studies of porphyrins to human serum albumin using affinity capillary electrophoresis. Electrophoresis. 2001 Jul; 22(11):2210-6. doi: 10.1002/1522-2683(20017)22:11<2210::aid-elps2210>3.0.co;2-w. [PMID: 11504054]
  • G Gu, C K Lim. Preparation and separation of hydroxy derivatives of uroporphyrinogen I by high-performance liquid chromatography with electrochemical detection. Journal of chromatography. A. 1996 Jan; 722(1-2):245-8. doi: 10.1016/0021-9673(95)00443-2. [PMID: 9019298]
  • R Guo, W Chai, J M Rideout, A M Lawson, C K Lim. Isolation and characterization of beta-hydroxypropionic acid- and hydroxyacetic acid-uroporphyrin I in the urine of a patient with congenital erythropoietic porphyria by high performance liquid chromatography and liquid secondary ion mass spectrometry. Biomedical chromatography : BMC. 1990 Jul; 4(4):141-3. doi: 10.1002/bmc.1130040404. [PMID: 2207373]
  • D R Bickers, M B Poh-Fitzpatrick. Günther's disease and the changing complexion of human porphyria. Photo-dermatology. 1986 Dec; 3(6):315-6. doi: NULL. [PMID: 3588350]
  • N Bauman, B S Pease. Depletion of complement by light and porphyrin does not depend on sequential activation. Complement (Basel, Switzerland). 1985; 2(2-3):127-32. doi: 10.1159/000467852. [PMID: 4085218]
  • M A El-Far, N R Pimstone. Tumour localization of uroporphyrin isomers I and III and their correlation to albumin and serum protein binding. Cell biochemistry and function. 1983 Oct; 1(3):156-60. doi: 10.1002/cbf.290010307. [PMID: 6678621]
  • F T G PRUNTY. Acute porphyria; investigations on the pathology of the porphyrins and identification of the excretion of uroporphyrin I. Archives of internal medicine (Chicago, Ill. : 1908). 1946 Jun; 77(?):623-42. doi: 10.1001/archinte.1946.00210410029003. [PMID: 20991229]