5,10-Methylene-THF (BioDeep_00000004386)

   

human metabolite Endogenous blood metabolite


代谢物信息卡片


2-({4-[(6aR)-1-hydroxy-3-imino-3H,4H,5H,6H,6aH,7H,8H,9H-imidazo[1,5-f]pteridin-8-yl]phenyl}formamido)pentanedioic acid

化学式: C20H23N7O6 (457.171)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(blood) 11.56%

分子结构信息

SMILES: c12[nH]c(nc(=O)c1N1[C@H](CN2)CN(C1)c1ccc(cc1)C(=O)N[C@@H](CCC(=O)O)C(=O)O)N
InChI: InChI=1S/C20H23N7O6/c21-20-24-16-15(18(31)25-20)27-9-26(8-12(27)7-22-16)11-3-1-10(2-4-11)17(30)23-13(19(32)33)5-6-14(28)29/h1-4,12-13H,5-9H2,(H,23,30)(H,28,29)(H,32,33)(H4,21,22,24,25,31)

描述信息

5,10-Methylene-THF is an intermediate in glycine, serine and threonine metabolism and one carbon metabolism. 5,10-CH2-THF can also be used as a coenzyme in the biosynthesis of thymidine. More specifically it is the C1-donor in the reactions catalyzed by thymidylate synthase and thymidylate synthase (FAD). It also acts as a coenzyme in the synthesis of serine from glycine via the enzyme serine hydroxymethyl transferase. 5,10-Methylene-THF is a substrate for Methylenetetrahydrofolate reductase. This enzyme converts 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate. This reaction is required for the multistep process that converts the amino acid homocysteine to methionine. The body uses methionine to make proteins and other important compounds. 5,10-CH2-THF is a substrate for many enzymes including Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase (mitochondrial), Aminomethyltransferase (mitochondrial), Serine hydroxymethyltransferase (mitochondrial), Methylenetetrahydrofolate reductase, C-1-tetrahydrofolate synthase (cytoplasmic), Serine hydroxymethyltransferase (cytosolic) and Thymidylate synthase.
5,10-Methylene-THF is an intermediate in the metabolism of Methane and the metabolism of Nitrogen. It is a substrate for Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase (mitochondrial), Aminomethyltransferase (mitochondrial), Serine hydroxymethyltransferase (mitochondrial), Methylenetetrahydrofolate reductase, C-1-tetrahydrofolate synthase (cytoplasmic), Serine hydroxymethyltransferase (cytosolic) and Thymidylate synthase. [HMDB]
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同义名列表

19 个代谢物同义名

2-({4-[(6aR)-1-hydroxy-3-imino-3H,4H,5H,6H,6aH,7H,8H,9H-imidazo[1,5-f]pteridin-8-yl]phenyl}formamido)pentanedioic acid; 2-({4-[(6aR)-1-hydroxy-3-imino-4H,5H,6H,6aH,7H,9H-imidazo[1,5-f]pteridin-8-yl]phenyl}formamido)pentanedioic acid; 2-[[4-[(6aR)-3-amino-1-oxo-4,5,6,6a,7,9-hexahydroimidazo[1,5-f]pteridin-8-yl]benzoyl]amino]pentanedioic acid; 5,10-Methylenetetrahydrofolate monohydrochloride, (L-glu)-isomer; 5,10-Methylenetetrahydrofolate, (L-glu)-(S)-isomer; 5,10-Methylenetetrahydrofolate, (D-glu)-isomer; (6R)-5,10-Methylenetetrahydrofolic acid; 5,10-Methenyltetrahydropteroylglutamate; 5,10-Methylene-5,6,7,8-tetrahydrofolate; (6R)-5,10-Methylenetetrahydrofolate; 5,10-Methylenetetrahydrofolic acid; N5>,N10-methylenetetrahydrofolate; 5,10-Methylene-6-hydrofolic acid; 5,10-Methylenetetrahydrofolate; 5,10-Methylene-6-hydrofolate; Tetrahydromethylenefolate; 5,10-methylene-THF; CH2H4Folate; 5,10-Methylenetetrahydrofolate



数据库引用编号

20 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(9)

PlantCyc(0)

代谢反应

144 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(16)

WikiPathways(6)

Plant Reactome(0)

INOH(6)

PlantCyc(13)

COVID-19 Disease Map(1)

PathBank(102)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ATF4, DHFR, DMGDH, MTHFD1, MTHFS, SARDH, SHMT2, SPTAN1
Peripheral membrane protein 1 HSD17B6
Endoplasmic reticulum membrane 1 GUCY2D
Nucleus 3 ATF4, GGH, SHMT2
cytosol 7 ATF4, DHFR, MTHFD1, MTHFD1L, MTHFR, MTHFS, SPTAN1
centrosome 1 ATF4
nucleoplasm 4 ALDH1L2, AMT, ATF4, GLDC
RNA polymerase II transcription regulator complex 1 ATF4
Cell membrane 2 ATF4, SLC19A1
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 SLC19A1
cell cortex 1 SPTAN1
cell junction 1 SPTAN1
Golgi membrane 1 INS
mitochondrial inner membrane 1 SHMT2
Lysosome 1 GGH
plasma membrane 5 GCG, GLDC, GUCY2D, SLC19A1, SPTAN1
Membrane 4 MTHFD1, MTHFD1L, SLC19A1, SPTAN1
apical plasma membrane 1 SLC19A1
basolateral plasma membrane 1 SLC19A1
extracellular exosome 5 ALDH1L2, GGH, MTHFD1, SHMT2, SPTAN1
Lumenal side 1 HSD17B6
endoplasmic reticulum 1 HSD17B6
extracellular space 4 GCG, GGH, INS, MTHFD2
mitochondrion 11 ALDH1L2, AMT, DHFR, DMGDH, GLDC, MTHFD1, MTHFD1L, MTHFD2, MTHFS, SARDH, SHMT2
protein-containing complex 1 ATF4
intracellular membrane-bounded organelle 2 HSD17B6, SPTAN1
Microsome membrane 1 HSD17B6
Single-pass type I membrane protein 1 GUCY2D
Secreted 2 GCG, INS
extracellular region 4 GCG, GGH, INS, SPTAN1
Mitochondrion matrix 1 SARDH
mitochondrial matrix 9 ALDH1L2, AMT, DMGDH, GLDC, MTHFD1L, MTHFD2, MTHFS, SARDH, SHMT2
photoreceptor outer segment 1 GUCY2D
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 ATF4
Extracellular vesicle 1 SPTAN1
actin cytoskeleton 1 SPTAN1
microtubule cytoskeleton 2 SHMT2, SPTAN1
Apical cell membrane 1 SLC19A1
Mitochondrion inner membrane 1 SHMT2
Cytoplasm, cytoskeleton 1 SPTAN1
mitochondrial nucleoid 1 SHMT2
nuclear speck 1 ATF4
nuclear outer membrane 1 GUCY2D
neuron projection 1 ATF4
chromatin 1 ATF4
cell projection 1 SPTAN1
Secreted, extracellular space 1 GGH
brush border membrane 1 SLC19A1
Cytoplasm, cell cortex 1 SPTAN1
Basolateral cell membrane 1 SLC19A1
endosome lumen 1 INS
Melanosome 1 GGH
Nucleus speckle 1 ATF4
secretory granule lumen 2 GCG, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 GCG, INS
cortical actin cytoskeleton 1 SPTAN1
specific granule lumen 2 GGH, SPTAN1
tertiary granule lumen 2 GGH, SPTAN1
transport vesicle 1 INS
azurophil granule lumen 1 GGH
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
Vacuole 1 GGH
spectrin 1 SPTAN1
photoreceptor outer segment membrane 1 GUCY2D
dendrite membrane 1 ATF4
nuclear periphery 1 ATF4
photoreceptor disc membrane 1 GUCY2D
[Glucagon-like peptide 1]: Secreted 1 GCG
ATF4-CREB1 transcription factor complex 1 ATF4
ATF1-ATF4 transcription factor complex 1 ATF4
CHOP-ATF4 complex 1 ATF4
Lewy body core 1 ATF4
glycine cleavage complex 2 AMT, GLDC
Mitochondrion matrix, mitochondrion nucleoid 1 SHMT2
BRISC complex 1 SHMT2
organelle 1 SPTAN1


文献列表

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