protoporphyrinogen (BioDeep_00001869234)
Main id: BioDeep_00000004563
PANOMIX_OTCML-2023
代谢物信息卡片
Protoporphyrinogen IX
化学式: C34H40N4O4 (568.3049)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: CC1=C2CC3=C(C(=C(N3)CC4=C(C(=C(N4)CC5=C(C(=C(N5)CC(=C1CCC(=O)O)N2)CCC(=O)O)C)C=C)C)C=C)C
InChI: InChI=1S/C34H40N4O4/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25/h7-8,35-38H,1-2,9-16H2,3-6H3,(H,39,40)(H,41,42)
描述信息
COVID info from COVID-19 Disease Map
Corona-virus
Coronavirus
SARS-CoV-2
COVID-19
SARS-CoV
COVID19
SARS2
SARS
同义名列表
数据库引用编号
10 个数据库交叉引用编号
- ChEBI: CHEBI:15435
- KEGG: C01079
- PubChem: 121893
- CAS: 7412-77-3
- MetaboLights: MTBLC15435
- PubChem: 4317
- KNApSAcK: C00007371
- 3DMET: B00236
- NIKKAJI: J1.944.003F
- KNApSAcK: 15435
分类词条
相关代谢途径
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
1 个相关的物种来源信息
- 9606 - Homo sapiens: 10.1007/S11306-016-1051-4
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Pawel Brzezowski, Brigitte Ksas, Michel Havaux, Bernhard Grimm, Marie Chazaux, Gilles Peltier, Xenie Johnson, Jean Alric. The function of PROTOPORPHYRINOGEN IX OXIDASE in chlorophyll biosynthesis requires oxidised plastoquinone in Chlamydomonas reinhardtii.
Communications biology.
2019; 2(?):159. doi:
10.1038/s42003-019-0395-5. [PMID: 31069268] - Dieter Hackenberg, Ulrich Keetman, Bernhard Grimm. Homologous NF-YC2 subunit from Arabidopsis and tobacco is activated by photooxidative stress and induces flowering.
International journal of molecular sciences.
2012; 13(3):3458-3477. doi:
10.3390/ijms13033458. [PMID: 22489162] - Irene Russo Krauss, Filomena Sica, Carlo Andrea Mattia, Antonello Merlino. Increasing the X-ray diffraction power of protein crystals by dehydration: the case of bovine serum albumin and a survey of literature data.
International journal of molecular sciences.
2012; 13(3):3782-800. doi:
10.3390/ijms13033782. [PMID: 22489183] - Tom A Mendum, Jane Newcombe, Ahmad A Mannan, Andrzej M Kierzek, Johnjoe McFadden. Interrogation of global mutagenesis data with a genome scale model of Neisseria meningitidis to assess gene fitness in vitro and in sera.
Genome biology.
2011 Dec; 12(12):R127. doi:
10.1186/gb-2011-12-12-r127. [PMID: 22208880] - Haibo Yu, Huibin Yang, Dongliang Cui, Liang Lv, Bin Li. Synthesis and herbicidal activity of diphenyl ether derivatives containing unsaturated carboxylates.
Journal of agricultural and food chemistry.
2011 Nov; 59(21):11718-26. doi:
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Eukaryotic cell.
2011 Nov; 10(11):1536-44. doi:
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BMC plant biology.
2011 Jun; 11(?):108. doi:
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Journal of agricultural and food chemistry.
2011 Jun; 59(11):5819-29. doi:
10.1021/jf101286h. [PMID: 20586458] - Li-Li Jiang, Yang Zuo, Zhi-Fang Wang, Yin Tan, Qiong-You Wu, Zhen Xi, Guang-Fu Yang. Design and syntheses of novel N-(benzothiazol-5-yl)-4,5,6,7-tetrahydro-1H-isoindole-1,3(2H)-dione and N-(benzothiazol-5-yl)isoindoline-1,3-dione as potent protoporphyrinogen oxidase inhibitors.
Journal of agricultural and food chemistry.
2011 Jun; 59(11):6172-9. doi:
10.1021/jf200616y. [PMID: 21517076] - Patrick J Tranel, Chance W Riggins, Michael S Bell, Aaron G Hager. Herbicide resistances in Amaranthus tuberculatus: a call for new options.
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2011 Jun; 59(11):5808-12. doi:
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2011 Apr; 155(4):1735-47. doi:
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2011 Mar; 434(3):365-81. doi:
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2011 Mar; 157(Pt 3):747-759. doi:
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PloS one.
2011; 6(10):e26532. doi:
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2011; 12(12):9236-64. doi:
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2010 Dec; 15(12):9024-34. doi:
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Plant physiology.
2010 Dec; 154(4):1871-85. doi:
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Plant & cell physiology.
2010 May; 51(5):670-81. doi:
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Plant & cell physiology.
2010 Apr; 51(4):650-63. doi:
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BMC genomics.
2010 Mar; 11(?):190. doi:
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2010 Mar; 365(1541):749-63. doi:
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Journal of agricultural and food chemistry.
2009 Oct; 57(20):9593-8. doi:
10.1021/jf902010g. [PMID: 19780536] - C Kochs, E Mühlenstädt, N J Neumann, S Hanneken. [Solarium-induced pseudoporphyria and variegate porphyria as rare differential diagnoses of porphyria cutanea tarda].
Der Hautarzt; Zeitschrift fur Dermatologie, Venerologie, und verwandte Gebiete.
2009 Oct; 60(10):790-3. doi:
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The Journal of biological chemistry.
2009 Sep; 284(37):24783-96. doi:
10.1074/jbc.m109.025205. [PMID: 19605356] - A V Corrigall, J A H Campbell, K Siziba, R E Kirsch, P N Meissner. The expression of protoporphyrinogen oxidase in human tissues.
Cellular and molecular biology (Noisy-le-Grand, France).
2009 Jul; 55(2):89-95. doi:
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Clinical chemistry.
2009 Jul; 55(7):1406-14. doi:
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Genome biology.
2009; 10(4):R36. doi:
10.1186/gb-2009-10-4-r36. [PMID: 19368726] - Franck E Dayan, J'Lynn Howell, Jeffrey D Weidenhamer. Dynamic root exudation of sorgoleone and its in planta mechanism of action.
Journal of experimental botany.
2009; 60(7):2107-17. doi:
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Journal of agricultural and food chemistry.
2008 Oct; 56(20):9535-42. doi:
10.1021/jf801774k. [PMID: 18808144] - David P Dixon, Adrian Lapthorn, Panagiotis Madesis, Elisabeth A Mudd, Anil Day, Robert Edwards. Binding and glutathione conjugation of porphyrinogens by plant glutathione transferases.
The Journal of biological chemistry.
2008 Jul; 283(29):20268-76. doi:
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Plant physiology.
2008 Jul; 147(3):1062-71. doi:
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Plant molecular biology.
2008 Jul; 67(5):535-46. doi:
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Current genomics.
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2008; 59(11):3131-41. doi:
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Traffic (Copenhagen, Denmark).
2007 Nov; 8(11):1601-16. doi:
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The Journal of biological chemistry.
2006 Dec; 281(50):38625-33. doi:
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The Plant journal : for cell and molecular biology.
2006 Nov; 48(4):499-510. doi:
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Journal of the European Academy of Dermatology and Venereology : JEADV.
2006 Sep; 20(8):974-9. doi:
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Journal of agricultural and food chemistry.
2006 Mar; 54(5):1687-92. doi:
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Plant & cell physiology.
2006 Mar; 47(3):372-9. doi:
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Ecotoxicology and environmental safety.
2006 Mar; 63(3):456-62. doi:
10.1016/j.ecoenv.2004.12.001. [PMID: 16406601] - Madge Y Graham. The diphenylether herbicide lactofen induces cell death and expression of defense-related genes in soybean.
Plant physiology.
2005 Dec; 139(4):1784-94. doi:
10.1104/pp.105.068676. [PMID: 16299178] - Robert van Lis, Ariane Atteia, Luiza A Nogaj, Samuel I Beale. Subcellular localization and light-regulated expression of protoporphyrinogen IX oxidase and ferrochelatase in Chlamydomonas reinhardtii.
Plant physiology.
2005 Dec; 139(4):1946-58. doi:
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Pathology.
2005 Aug; 37(4):324-6. doi:
10.1080/00313020500169602. [PMID: 16194838] - Olga Soldatova, Alexey Apchelimov, Natalia Radukina, Tatiana Ezhova, Sergey Shestakov, Valeria Ziemann, Boris Hedtke, Bernhard Grimm. An Arabidopsis mutant that is resistant to the protoporphyrinogen oxidase inhibitor acifluorfen shows regulatory changes in tetrapyrrole biosynthesis.
Molecular genetics and genomics : MGG.
2005 Jun; 273(4):311-8. doi:
10.1007/s00438-005-1129-6. [PMID: 15815918] - Sunyo Jung, Kyoungwhan Back. Herbicidal and antioxidant responses of transgenic rice overexpressing Myxococcus xanthus protoporphyrinogen oxidase.
Plant physiology and biochemistry : PPB.
2005 May; 43(5):423-30. doi:
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PLoS biology.
2005 Apr; 3(4):e121. doi:
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Pest management science.
2005 Mar; 61(3):277-85. doi:
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Phytopathology.
2005 Mar; 95(3):220-6. doi:
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Zeitschrift fur Naturforschung. C, Journal of biosciences.
2005 Mar; 60(3-4):166-71. doi:
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Bioorganic & medicinal chemistry.
2004 Dec; 12(23):6183-91. doi:
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The British journal of dermatology.
2004 Aug; 151(2):465-71. doi:
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Plant & cell physiology.
2004 Jun; 45(6):723-33. doi:
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Clinical chemistry.
2004 May; 50(5):915-23. doi:
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International journal of pediatric otorhinolaryngology.
2004 Apr; 68(4):419-23. doi:
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Biochemical and biophysical research communications.
2003 Oct; 309(4):873-8. doi:
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Bioorganic chemistry.
2003 Oct; 31(5):389-97. doi:
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Plant physiology.
2003 Oct; 133(2):736-47. doi:
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Plant cell reports.
2003 Aug; 21(12):1221-7. doi:
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Plant physiology.
2003 Jul; 132(3):1508-17. doi:
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Biochimica et biophysica acta.
2003 May; 1621(2):226-33. doi:
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Chronobiology international.
2003 Mar; 20(2):299-324. doi:
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European journal of human genetics : EJHG.
2002 Oct; 10(10):649-57. doi:
10.1038/sj.ejhg.5200860. [PMID: 12357337] - Naohide Watanabe, Seiji Takayama, Shigeo Yoshida, Akira Isogai, Fang-Sik Che. Resistance to protoporphyrinogen oxidase-inhibiting compound S23142 from overproduction of mitochondrial protoporphyrinogen oxidase by gene amplification in photomixotrophic tobacco cells.
Bioscience, biotechnology, and biochemistry.
2002 Sep; 66(9):1799-805. doi:
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Internal medicine journal.
2002 Sep; 32(9-10):445-50. doi:
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Cellular and molecular biology (Noisy-le-Grand, France).
2002 Feb; 48(1):71-8. doi:
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