(R)-3-Hydroxybutyric acid (BioDeep_00001868148)

Main id: BioDeep_00000001234

 

PANOMIX_OTCML-2023 Chemicals and Drugs Antibiotics


代谢物信息卡片


(R)-3-Hydroxybutanoic acid

化学式: C4H8O3 (104.0473)
中文名称: (R)-3-羟基丁酸
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CC(CC(=O)O)O
InChI: InChI=1S/C4H8O3/c1-3(5)2-4(6)7/h3,5H,2H2,1H3,(H,6,7)/t3-/m1/s1

描述信息

The R-enantiomer of 3-hydroxybutyric acid. Involved in the synthesis and degradation of ketone bodies, it can be used as an energy source by the brain during hypoglycaemia, and for the synthesis of biodegradable plastics. It is a sex pheremone in the European spider Linyphia triangularis.
(R)-3-Hydroxybutanoic acid is a metabolite, and converted from acetoacetic acid catalyzed by 3-hydroxybutyrate dehydrogenase. (R)-3-Hydroxybutanoic acid has applications as a nutrition source and as a precursor for vitamins, antibiotics and pheromones[1][2].

同义名列表

5 个代谢物同义名

(R)-3-Hydroxybutanoic acid; (R)-3-Hydroxybutyric acid; (R)-(-)-3-Hydroxybutanoic acid; (R)-3-Hydroxybutanoate; (R)-3-Hydroxybutyric acid



数据库引用编号

14 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(2)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

5 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ALB, BCL2, BDNF, CASP3, CASP9, CAT, DCTN4, FOXO1
Peripheral membrane protein 1 LPL
Endoplasmic reticulum membrane 1 BCL2
Nucleus 6 ALB, BCL2, CASP3, CASP9, DCTN4, FOXO1
cytosol 9 AACS, ALB, BCL2, CASP3, CASP9, CAT, DCTN4, FOXO1, LIPE
dendrite 1 BDNF
centrosome 3 ALB, DCTN4, SLC16A1
nucleoplasm 2 CASP3, FOXO1
Cell membrane 4 HCAR2, LIPE, LPL, SLC16A1
Multi-pass membrane protein 2 HCAR2, SLC16A1
Synapse 1 SLC16A1
cell cortex 1 DCTN4
cell junction 2 HCAR2, SLC16A1
cell surface 1 LPL
glutamatergic synapse 2 CASP3, GHRL
Golgi apparatus 1 ALB
Golgi membrane 1 INS
mitochondrial inner membrane 1 BDH1
neuronal cell body 1 CASP3
postsynapse 1 GHRL
synaptic vesicle 1 BDNF
Cytoplasm, cytosol 2 AACS, LIPE
plasma membrane 4 GCG, HCAR2, LPL, SLC16A1
Membrane 7 BCL2, BDH1, BDNF, CAT, HCAR2, LIPE, SLC16A1
apical plasma membrane 1 SLC16A1
axon 2 BDNF, GHRL
basolateral plasma membrane 1 SLC16A1
caveola 1 LIPE
extracellular exosome 4 ALB, CAT, SLC16A1, SOD2
endoplasmic reticulum 2 ALB, BCL2
extracellular space 8 ALB, BDNF, GCG, GHRL, IL6, INS, LPL, PYY
perinuclear region of cytoplasm 1 BDNF
Schaffer collateral - CA1 synapse 1 GHRL
mitochondrion 6 BCL2, BDH1, CASP9, CAT, FOXO1, SOD2
protein-containing complex 4 ALB, BCL2, CASP9, CAT
intracellular membrane-bounded organelle 3 BDH1, CAT, SLC16A1
postsynaptic density 1 CASP3
Secreted 7 ALB, BDNF, GCG, GHRL, IL6, INS, LPL
extracellular region 9 ALB, BDNF, CAT, GCG, GHRL, IL6, INS, LPL, PYY
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 1 BCL2
Mitochondrion matrix 2 BDH1, SOD2
mitochondrial matrix 3 BDH1, CAT, SOD2
Extracellular side 1 LPL
anchoring junction 1 ALB
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 DCTN4
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
Secreted, extracellular space, extracellular matrix 1 LPL
chylomicron 1 LPL
very-low-density lipoprotein particle 1 LPL
neuronal dense core vesicle lumen 1 GHRL
Apical cell membrane 1 SLC16A1
Mitochondrion inner membrane 1 BDH1
pore complex 1 BCL2
Cytoplasm, cytoskeleton 1 DCTN4
focal adhesion 2 CAT, DCTN4
mitochondrial nucleoid 1 SOD2
Peroxisome 1 CAT
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
lateral plasma membrane 1 SLC16A1
Cytoplasm, myofibril, sarcomere 1 DCTN4
sarcomere 1 DCTN4
ciliary basal body 1 ALB
chromatin 1 FOXO1
centriole 1 ALB
spindle pole 2 ALB, DCTN4
Cytoplasm, cell cortex 1 DCTN4
blood microparticle 1 ALB
Basolateral cell membrane 1 SLC16A1
endosome lumen 1 INS
Lipid droplet 1 LIPE
Membrane, caveola 1 LIPE
myelin sheath 1 BCL2
stress fiber 1 DCTN4
basal plasma membrane 1 SLC16A1
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 4 CAT, GCG, GHRL, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 6 ALB, BDNF, GCG, GHRL, IL6, INS
platelet alpha granule lumen 1 ALB
dynactin complex 1 DCTN4
kinetochore 1 DCTN4
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
cytoplasmic dynein complex 1 DCTN4
apoptosome 1 CASP9
Cytoplasm, cytoskeleton, stress fiber 1 DCTN4
death-inducing signaling complex 1 CASP3
[Glucagon-like peptide 1]: Secreted 1 GCG
catalase complex 1 CAT
catalytic complex 1 LPL
interleukin-6 receptor complex 1 IL6
BAD-BCL-2 complex 1 BCL2
[Neurotrophic factor BDNF precursor form]: Secreted 1 BDNF
ciliary transition fiber 1 ALB
caspase complex 1 CASP9
matrix side of mitochondrial inner membrane 1 BDH1


文献列表

  • David C Young, Anne Kasmar, Garrett Moraski, Tan-Yun Cheng, Andrew J Walz, Jingdan Hu, Yanping Xu, Gregory W Endres, Adam Uzieblo, Dirk Zajonc, Catherine E Costello, Marvin J Miller, D Branch Moody. Synthesis of dideoxymycobactin antigens presented by CD1a reveals T cell fine specificity for natural lipopeptide structures. The Journal of biological chemistry. 2009 Sep; 284(37):25087-96. doi: 10.1074/jbc.m109.000802. [PMID: 19605355]
  • Gregory Kaler, David M Truong, Akash Khandelwal, Megha Nagle, Satish A Eraly, Peter W Swaan, Sanjay K Nigam. Structural variation governs substrate specificity for organic anion transporter (OAT) homologs. Potential remote sensing by OAT family members. The Journal of biological chemistry. 2007 Aug; 282(33):23841-53. doi: 10.1074/jbc.m703467200. [PMID: 17553798]
  • Andrew K P Taggart, Jukka Kero, Xiaodong Gan, Tian-Quan Cai, Kang Cheng, Marc Ippolito, Ning Ren, Rebecca Kaplan, Kenneth Wu, Tsuei-Ju Wu, Lan Jin, Chen Liaw, Ruoping Chen, Jeremy Richman, Daniel Connolly, Stefan Offermanns, Samuel D Wright, M Gerard Waters. (D)-beta-Hydroxybutyrate inhibits adipocyte lipolysis via the nicotinic acid receptor PUMA-G. The Journal of biological chemistry. 2005 Jul; 280(29):26649-52. doi: 10.1074/jbc.c500213200. [PMID: 15929991]
  • J E Manning Fox, D Meredith, A P Halestrap. Characterisation of human monocarboxylate transporter 4 substantiates its role in lactic acid efflux from skeletal muscle. The Journal of physiology. 2000 Dec; 529 Pt 2(?):285-93. doi: 10.1111/j.1469-7793.2000.00285.x. [PMID: 11101640]