Shikimate-3-phosphate (BioDeep_00001869207)

Main id: BioDeep_00000002690

 


代谢物信息卡片


Shikimate-3-phosphate

化学式: C7H11O8P (254.0192)
中文名称: 莽草酸-3-磷酸酯
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1C(C(C(C=C1C(=O)O)OP(=O)(O)O)O)O
InChI: InChI=1S/C7H11O8P/c8-4-1-3(7(10)11)2-5(6(4)9)15-16(12,13)14/h2,4-6,8-9H,1H2,(H,10,11)(H2,12,13,14)/t4-,5-,6+/m1/s1

描述信息

同义名列表

1 个代谢物同义名

Shikimate-3-phosphate



数据库引用编号

11 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(2)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 5 ARHGAP45, GLTP, GLUL, PKM, SKIC3
Endoplasmic reticulum membrane 1 SFTPD
Nucleus 3 GLUL, PKM, SKIC3
cytosol 5 ARHGAP45, GLTP, GLUL, PKM, SKIC3
nucleoplasm 2 ATP2B1, SKIC3
Cell membrane 3 ATP2B1, GLUL, SLC1A2
Lipid-anchor 1 GLUL
ruffle membrane 1 ARHGAP45
Multi-pass membrane protein 2 ATP2B1, SLC1A2
Synapse 1 ATP2B1
cell surface 1 SLC1A2
glutamatergic synapse 2 ATP2B1, SLC1A2
presynaptic membrane 2 ATP2B1, SLC1A2
Cytoplasm, cytosol 1 GLUL
Lysosome 1 SFTPD
plasma membrane 4 ARHGAP45, ATP2B1, GLUL, SLC1A2
synaptic vesicle membrane 1 ATP2B1
Membrane 3 ARHGAP45, ATP2B1, SLC1A2
basolateral plasma membrane 1 ATP2B1
extracellular exosome 3 ATP2B1, GLUL, PKM
endoplasmic reticulum 1 GLUL
extracellular space 1 SFTPD
mitochondrion 2 GLUL, PKM
intracellular membrane-bounded organelle 1 ATP2B1
extracellular region 3 ARHGAP45, PKM, SFTPD
Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane 1 ATP2B1
Extracellular vesicle 1 PKM
multivesicular body 1 SFTPD
vesicle 2 PKM, SLC1A2
Cell projection, ruffle membrane 1 ARHGAP45
Membrane raft 1 SLC1A2
axolemma 1 SLC1A2
cis-Golgi network 1 GOLGA6A
collagen trimer 1 SFTPD
collagen-containing extracellular matrix 1 PKM
lateral plasma membrane 1 ATP2B1
cilium 1 PKM
cell projection 1 ATP2B1
Basolateral cell membrane 1 ATP2B1
Golgi cisterna membrane 1 GOLGA6A
euchromatin 1 SKIC3
Presynaptic cell membrane 1 ATP2B1
cell body 2 GLUL, SLC1A2
Microsome 1 GLUL
ficolin-1-rich granule lumen 1 PKM
secretory granule lumen 2 ARHGAP45, PKM
endocytic vesicle 1 SFTPD
azurophil granule lumen 1 ARHGAP45
immunological synapse 1 ATP2B1
clathrin-coated endocytic vesicle 1 SFTPD
Rough endoplasmic reticulum 1 PKM
astrocyte projection 1 SLC1A2
glial cell projection 1 GLUL
neuron projection terminus 1 SLC1A2
photoreceptor ribbon synapse 1 ATP2B1
[Isoform M2]: Cytoplasm 1 PKM
[Isoform M1]: Cytoplasm 1 PKM
membrane protein complex 1 SLC1A2
Golgi cis cisterna 1 GOLGA6A
Ski complex 1 SKIC3


文献列表

  • Inge Schwedt, Kerstin Schöne, Maike Eckert, Manon Pizzinato, Laura Winkler, Barbora Knotkova, Björn Richts, Jann-Louis Hau, Julia Steuber, Raul Mireles, Lianet Noda-Garcia, Günter Fritz, Carolin Mittelstädt, Robert Hertel, Fabian M Commichau. The low mutational flexibility of the EPSP synthase in Bacillus subtilis is due to a higher demand for shikimate pathway intermediates. Environmental microbiology. 2023 Oct; ?(?):. doi: 10.1111/1462-2920.16518. [PMID: 37822042]
  • S R Padgette, Q K Huynh, S Aykent, R D Sammons, J A Sikorski, G M Kishore. Identification of the reactive cysteines of Escherichia coli 5-enolpyruvylshikimate-3-phosphate synthase and their nonessentiality for enzymatic catalysis. The Journal of biological chemistry. 1988 Feb; 263(4):1798-802. doi: 10.1016/s0021-9258(19)77947-2. [PMID: 3276677]
  • Q K Huynh, G M Kishore, G S Bild. 5-Enolpyruvyl shikimate 3-phosphate synthase from Escherichia coli. Identification of Lys-22 as a potential active site residue. The Journal of biological chemistry. 1988 Jan; 263(2):735-9. doi: . [PMID: 3121621]