Hydroxymethylbilane (BioDeep_00001868989)

Main id: BioDeep_00000004542

 


代谢物信息卡片


Hydroxymethylbilane

化学式: C40H46N4O17 (854.2858)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1=C(C(=C(N1)CC2=C(C(=C(N2)CC3=C(C(=C(N3)CC4=C(C(=C(N4)CO)CC(=O)O)CCC(=O)O)CC(=O)O)CCC(=O)O)CC(=O)O)CCC(=O)O)CC(=O)O)CCC(=O)O
InChI: InChI=1S/C40H46N4O17/c45-17-32-25(12-40(60)61)21(4-8-36(52)53)29(44-32)15-31-24(11-39(58)59)20(3-7-35(50)51)28(43-31)14-30-23(10-38(56)57)19(2-6-34(48)49)27(42-30)13-26-22(9-37(54)55)18(16-41-26)1-5-33(46)47/h16,41-45H,1-15,17H2,(H,46,47)(H,48,49)(H,50,51)(H,52,53)(H,54,55)(H,56,57)(H,58,59)(H,60,61)

描述信息

同义名列表

3 个代谢物同义名

Hydroxymethylbilane; Preuroporphyrinogen; Hydroxymethylbilane



数据库引用编号

11 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 4 AHSP, AIMP2, CPOX, HMBS
Peripheral membrane protein 1 CYP1B1
Endoplasmic reticulum membrane 3 CYP1B1, HMOX1, HMOX2
Nucleus 3 AIMP2, GATA1, HMOX1
cytosol 7 AIMP2, CPOX, HMBS, HMOX1, MB, UROD, UROS
nucleoplasm 4 CD2, GATA1, HMOX1, UROD
Cell membrane 3 CD2, EPOR, TNF
Cytoplasmic side 2 HMOX1, HMOX2
cell surface 3 CD2, EPO, TNF
Golgi apparatus 1 CD2
Golgi membrane 2 C1GALT1, INS
mitochondrial inner membrane 1 FECH
neuronal cell body 1 TNF
Cytoplasm, cytosol 1 AIMP2
plasma membrane 5 CD2, EPOR, GCG, HMOX2, TNF
Membrane 7 AIMP2, C1GALT1, CPOX, CYP1B1, EPOR, HMOX1, HMOX2
extracellular exosome 2 EPO, MB
endoplasmic reticulum 1 HMOX1
extracellular space 5 EPO, GCG, HMOX1, INS, TNF
perinuclear region of cytoplasm 1 HMOX1
mitochondrion 4 CPOX, CYP1B1, FECH, UROS
protein-containing complex 1 CD2
intracellular membrane-bounded organelle 1 CYP1B1
Microsome membrane 2 CYP1B1, HMOX2
Single-pass type I membrane protein 2 CD2, EPOR
Secreted 3 EPO, GCG, INS
extracellular region 6 CD2, EPO, EPOR, GCG, INS, TNF
cytoplasmic side of plasma membrane 1 CD2
Single-pass membrane protein 1 EPOR
mitochondrial outer membrane 1 HMOX1
mitochondrial matrix 1 FECH
transcription regulator complex 1 GATA1
external side of plasma membrane 3 CD2, EPOR, TNF
sarcoplasm 1 MB
cell-cell junction 1 CD2
recycling endosome 1 TNF
Single-pass type II membrane protein 2 C1GALT1, TNF
Mitochondrion inner membrane 1 FECH
Membrane raft 1 TNF
mitochondrial intermembrane space 1 CPOX
nuclear speck 1 EPOR
chromatin 1 GATA1
phagocytic cup 1 TNF
endosome lumen 1 INS
specific granule membrane 1 HMOX2
cell body 1 EPO
secretory granule lumen 3 EPO, GCG, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 GCG, INS
transcription repressor complex 1 GATA1
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
Single-pass type IV membrane protein 2 HMOX1, HMOX2
protein-DNA complex 1 GATA1
aminoacyl-tRNA synthetase multienzyme complex 1 AIMP2
hemoglobin complex 1 AHSP
[Glucagon-like peptide 1]: Secreted 1 GCG
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
Cytoplasm, sarcoplasm 1 MB
[Isoform EPOR-S]: Secreted 1 EPOR
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Marina Gálvez-Peralta, Lei He, Lucia F Jorge-Nebert, Bin Wang, Marian L Miller, Bryan L Eppert, Scott Afton, Daniel W Nebert. ZIP8 zinc transporter: indispensable role for both multiple-organ organogenesis and hematopoiesis in utero. PloS one. 2012; 7(5):e36055. doi: 10.1371/journal.pone.0036055. [PMID: 22563477]
  • Jian Wang, Kostas Pantopoulos. Regulation of cellular iron metabolism. The Biochemical journal. 2011 Mar; 434(3):365-81. doi: 10.1042/bj20101825. [PMID: 21348856]
  • G Urata. [The chemistry of porphyrins and their precursors on the heme biosynthetic chain]. Nihon rinsho. Japanese journal of clinical medicine. 1995 Jun; 53(6):1319-28. doi: . [PMID: 7616643]