D-Erythro-imidazole-glycerol-phosphate (BioDeep_00000005609)

 

Secondary id: BioDeep_00001869455

human metabolite Endogenous


代谢物信息卡片


[(2R,3S)-2,3-dihydroxy-3-(1H-imidazol-4-yl)propoxy]phosphonic acid

化学式: C6H11N2O6P (238.0355)
中文名称: D-赤-咪唑基甘油磷酸酯
谱图信息: 最多检出来源 Homo sapiens(natural_products) 4.51%

分子结构信息

SMILES: C1=C(NC=N1)C(C(COP(=O)(O)O)O)O
InChI: InChI=1S/C6H11N2O6P/c9-5(2-14-15(11,12)13)6(10)4-1-7-3-8-4/h1,3,5-6,9-10H,2H2,(H,7,8)(H2,11,12,13)/t5-,6+/m1/s1

描述信息

D-Erythro-imidazole-glycerol-phosphate belongs to the class of organic compounds known as monoalkyl phosphates. These are organic compounds containing a phosphate group that is linked to exactly one alkyl chain. D-Erythro-imidazole-glycerol-phosphate is a very strong basic compound (based on its pKa). Outside of the human body, D-erythro-imidazole-glycerol-phosphate has been detected, but not quantified in, several different foods, such as mammee apples, scarlet beans, grass pea, olives, and bog bilberries. This could make D-erythro-imidazole-glycerol-phosphate a potential biomarker for the consumption of these foods. D-Erythro-imidazole-glycerol-phosphate is an intermediate in histidine metabolism. It is a substrate for imidazoleglycerol-phosphate dehydratase (hisB) and can be generated from phosphoribulosylformimino-AICAR-P.
D-Erythro-imidazole-glycerol-phosphate is an intermediate in Histidine metabolism. It is a substrate for imidazoleglycerol-phosphate dehydratase (hisB) and can be generated from Phosphoribulosyl-formimino-AICAR-phosphate then it is converted to Imidazole-acetol phosphate. [HMDB]. D-Erythro-imidazole-glycerol-phosphate is found in many foods, some of which are buffalo currant, fruits, hyacinth bean, and small-leaf linden.

同义名列表

18 个代谢物同义名

[(2R,3S)-2,3-dihydroxy-3-(1H-imidazol-4-yl)propoxy]phosphonic acid; (2R,3S)-2,3-dihydroxy-3-(1H-imidazol-4-yl)propoxyphosphonic acid; D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate; D-Erythro-imidazole-glycerol 3-phosphoric acid; D-Erythro-imidazole-glycerol-phosphoric acid; D-Erythro-imidazole-glycerol phosphoric acid; D-Erythro-imidazole-glycerol 3-phosphate; D-Erythro-imidazole-glycerol-phosphate; D-erythro-Imidazolylglycerol phosphate; D-Erythro-imidazole-glycerol phosphate; D-erythro-Imidazoleglycerol-phosphate; erythro-Imidazole-glycerol-phosphate; D-erythro-Imidazole-glycerol-P; Imidazole glycerol phosphate; erythro-Imidazole-glycerol-P; imidazoleglycerol phosphate; IGP; D-erythro-Imidazolylglycerol phosphate



数据库引用编号

17 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

321 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(2)

WikiPathways(1)

Plant Reactome(312)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(6)

PharmGKB(0)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 AASS, ADRA2A, AXIN2, BTRC, DARS1, FBXW11, HARS1, KYNU, PRKX
Peripheral membrane protein 1 FKBP2
Endoplasmic reticulum membrane 1 FKBP2
Nucleus 5 AASS, AXIN2, BTRC, FBXW11, PRKX
cytosol 11 AASS, ASNS, AXIN2, BTRC, DARS1, FBXW11, GLS, HARS1, KYNU, MB, PPAT
centrosome 2 AXIN2, FBXW11
nucleoplasm 3 BTRC, KYNU, PRKX
Cell membrane 1 ADRA2A
Multi-pass membrane protein 1 ADRA2A
Synapse 2 DARS1, GLS
glutamatergic synapse 1 ADRA2A
neuronal cell body 2 ADRA2A, FBXW11
Cytoplasm, cytosol 3 DARS1, GLS, KYNU
plasma membrane 2 ADRA2A, AXIN2
Membrane 2 DARS1, FKBP2
basolateral plasma membrane 1 ADRA2A
extracellular exosome 2 DARS1, MB
endoplasmic reticulum 1 FKBP2
mitochondrion 4 AASS, GLS, HARS1, KYNU
intracellular membrane-bounded organelle 1 AASS
mitochondrial matrix 2 AASS, GLS
beta-catenin destruction complex 1 AXIN2
axon cytoplasm 1 FBXW11
sarcoplasm 1 MB
presynaptic active zone membrane 1 ADRA2A
GABA-ergic synapse 1 ADRA2A
receptor complex 1 ADRA2A
neuron projection 1 FBXW11
microtubule associated complex 1 FBXW11
[Isoform 1]: Mitochondrion 1 GLS
nuclear envelope 1 FBXW11
ubiquitin ligase complex 1 FBXW11
axon terminus 1 ADRA2A
kinetochore 1 FBXW11
postsynaptic density membrane 1 ADRA2A
cytoplasmic microtubule 1 FBXW11
dopaminergic synapse 1 ADRA2A
aminoacyl-tRNA synthetase multienzyme complex 1 DARS1
[Isoform 3]: Mitochondrion 1 GLS
[Glutaminase kidney isoform, mitochondrial 68 kDa chain]: Mitochondrion matrix 1 GLS
[Glutaminase kidney isoform, mitochondrial 65 kDa chain]: Mitochondrion matrix 1 GLS
Cytoplasm, sarcoplasm 1 MB
SCF ubiquitin ligase complex 2 BTRC, FBXW11


文献列表