Heme (BioDeep_00000004369)

 

Secondary id: BioDeep_00001028588

human metabolite Endogenous PANOMIX_OTCML-2023


代谢物信息卡片


4,20-bis(2-carboxyethyl)-10,15-diethenyl-5,9,14,19-tetramethyl-2lambda5,22,23lambda5,25-tetraaza-1-ferraoctacyclo[11.9.1.1^{1,8}.1^{3,21}.0^{2,6}.0^{16,23}.0^{18,22}.0^{11,25}]pentacosa-2,4,6,8,10,12,14,16(23),17,19,21(24)-undecaene-2,23-bis(ylium)-1,1-diuide

化学式: C34H32FeN4O4 (616.1773)
中文名称: 血红素, 血红素铁
谱图信息: 最多检出来源 Homo sapiens(feces) 49.32%

Reviewed

Last reviewed on 2024-06-29.

Cite this Page

Heme. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/heme (retrieved 2024-12-22) (BioDeep RN: BioDeep_00000004369). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C=Cc1c(C)c2/C=C\3/C(=C(CCC(=O)O)C(=N3)/C=c\3/c(CCC(=O)O)c(C)/c(=C/C4=N/C(=C\c1[n-]2)/C(=C4C=C)C)/[n-]3)C.[Fe+2]
InChI: /q

描述信息

Heme is the color-furnishing portion of hemoglobin. It is found free in tissues and as the prosthetic group in many hemeproteins. A heme or haem is a prosthetic group that consists of an iron atom contained in the center of a large heterocyclic organic ring called a porphyrin. Not all porphyrins contain iron, but a substantial fraction of porphyrin-containing metalloproteins have heme as their prosthetic subunit; these are known as hemoproteins.
Protoheme ix, also known as ferroprotoheme or [fe(ppix)], is a member of the class of compounds known as metalloporphyrins. Metalloporphyrins are polycyclic compounds containing a porphyrin moiety and a metal atom. Protoheme ix can be found in a number of food items such as orange mint, cucumber, deerberry, and pear, which makes protoheme ix a potential biomarker for the consumption of these food products.
Ferroheme, a complex of ferrous iron and a porphyrin, is an isosteric inhibitor of fatty acid binding to rat liver fatty acid binding protein[1][2].
Ferroheme, a complex of ferrous iron and a porphyrin, is an isosteric inhibitor of fatty acid binding to rat liver fatty acid binding protein[1][2].

同义名列表

18 个代谢物同义名

4,20-bis(2-carboxyethyl)-10,15-diethenyl-5,9,14,19-tetramethyl-2lambda5,22,23lambda5,25-tetraaza-1-ferraoctacyclo[11.9.1.1^{1,8}.1^{3,21}.0^{2,6}.0^{16,23}.0^{18,22}.0^{11,25}]pentacosa-2,4,6,8,10,12,14,16(23),17,19,21(24)-undecaene-2,23-bis(ylium)-1,1-diuide; [3,7,12,17-Tetramethyl-8,13-divinylporphyrin-2,18-dipropanoato(2-)]iron(II); Iron(II) protoporphyrin IX; Ferroprotoporphyrin IX; Ferrous protoheme IX; Ferrous protoheme; Ferroprotoheme; Protoferroheme; Protoheme IX; [Fe(ppix)]; Protoheme; Fe(ppix); Hematin; Heme b; Haem; Heme; Ferroheme; Heme



数据库引用编号

13 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

1 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(1)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 CBS, CPOX, CYP1A1, CYP2E1, GUCY1A1, NFE2, NFKB1, NOS3, TP53, VEGFA
Peripheral membrane protein 3 CYP1A1, CYP1B1, CYP2E1
Endoplasmic reticulum membrane 3 CYP1A1, CYP1B1, CYP2E1
Nucleus 6 CBS, NFE2, NFKB1, NOS3, TP53, VEGFA
cytosol 12 CBS, CPOX, GCLC, GCLM, GUCY1A1, HBB, NFKB1, NGB, NOS3, TDO2, TP53, UROS
centrosome 1 TP53
nucleoplasm 4 NFE2, NFKB1, NOS3, TP53
RNA polymerase II transcription regulator complex 1 NFE2
Multi-pass membrane protein 1 MT-CYB
cell surface 2 EPO, VEGFA
glutamatergic synapse 1 GUCY1A1
Golgi apparatus 2 NOS3, VEGFA
Golgi membrane 1 NOS3
mitochondrial inner membrane 3 CYP1A1, CYP2E1, MT-CYB
Cytoplasm, cytosol 1 NGB
plasma membrane 1 NOS3
Membrane 6 CPOX, CYP1B1, HBB, MT-CYB, TP53, VEGFA
caveola 1 NOS3
extracellular exosome 3 EPO, HBB, HPX
endoplasmic reticulum 2 TP53, VEGFA
extracellular space 4 EPO, HBB, HPX, VEGFA
perinuclear region of cytoplasm 1 NOS3
adherens junction 1 VEGFA
mitochondrion 8 CPOX, CYP1A1, CYP1B1, GCLC, MT-CYB, NFKB1, TP53, UROS
protein-containing complex 1 TP53
intracellular membrane-bounded organelle 3 CYP1A1, CYP1B1, CYP2E1
Microsome membrane 3 CYP1A1, CYP1B1, CYP2E1
Secreted 2 EPO, VEGFA
extracellular region 5 EPO, HBB, HPX, NFKB1, VEGFA
Mitochondrion matrix 2 NGB, TP53
mitochondrial matrix 2 NGB, TP53
transcription regulator complex 2 NFKB1, TP53
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 TP53
Secreted, extracellular space, extracellular matrix 1 VEGFA
nucleolus 1 TP53
Cytoplasm, P-body 1 NOS3
P-body 1 NOS3
Mitochondrion inner membrane 3 CYP1A1, CYP2E1, MT-CYB
Cytoplasm, cytoskeleton 1 TP53
GABA-ergic synapse 1 GUCY1A1
extracellular matrix 1 VEGFA
Nucleus, PML body 1 TP53
PML body 2 NFE2, TP53
mitochondrial intermembrane space 1 CPOX
collagen-containing extracellular matrix 1 HPX
secretory granule 1 VEGFA
chromatin 3 NFE2, NFKB1, TP53
cytoskeleton 1 NOS3
blood microparticle 2 HBB, HPX
site of double-strand break 1 TP53
Cytoplasm, Stress granule 1 NOS3
cytoplasmic stress granule 1 NOS3
cell body 1 EPO
germ cell nucleus 1 TP53
replication fork 1 TP53
ficolin-1-rich granule lumen 1 HBB
secretory granule lumen 2 EPO, NFKB1
nuclear matrix 1 TP53
transcription repressor complex 1 TP53
platelet alpha granule lumen 1 VEGFA
specific granule lumen 1 NFKB1
tertiary granule lumen 1 HBB
endocytic vesicle membrane 1 NOS3
respiratory chain complex III 1 MT-CYB
[Isoform 1]: Nucleus 1 TP53
protein-DNA complex 1 NFE2
guanylate cyclase complex, soluble 1 GUCY1A1
hemoglobin complex 1 HBB
endocytic vesicle lumen 2 HBB, HPX
haptoglobin-hemoglobin complex 1 HBB
[N-VEGF]: Cytoplasm 1 VEGFA
[VEGFA]: Secreted 1 VEGFA
[Isoform L-VEGF189]: Endoplasmic reticulum 1 VEGFA
[Isoform VEGF121]: Secreted 1 VEGFA
[Isoform VEGF165]: Secreted 1 VEGFA
VEGF-A complex 1 VEGFA
[Nuclear factor NF-kappa-B p105 subunit]: Cytoplasm 1 NFKB1
[Nuclear factor NF-kappa-B p50 subunit]: Nucleus 1 NFKB1
I-kappaB/NF-kappaB complex 1 NFKB1
NF-kappaB p50/p65 complex 1 NFKB1
glutamate-cysteine ligase complex 2 GCLC, GCLM


文献列表

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  • Pauline Puylaert, Lynn Roth, Melissa Van Praet, Isabel Pintelon, Catalina Dumitrascu, Alexander van Nuijs, Greta Klejborowska, Pieter-Jan Guns, Tom Vanden Berghe, Koen Augustyns, Guido R Y De Meyer, Wim Martinet. Effect of erythrophagocytosis-induced ferroptosis during angiogenesis in atherosclerotic plaques. Angiogenesis. 2023 11; 26(4):505-522. doi: 10.1007/s10456-023-09877-6. [PMID: 37120604]
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  • Shengjie Liao, Mi Huang, Yanli Liao, Chao Yuan. HMOX1 Promotes Ferroptosis Induced by Erastin in Lens Epithelial Cell through Modulates Fe2+ Production. Current eye research. 2023 01; 48(1):25-33. doi: 10.1080/02713683.2022.2138450. [PMID: 36300537]
  • Jinjing Xu, Kuiyang Zhu, Yali Wang, Jing Chen. The dual role and mutual dependence of heme/HO-1/Bach1 axis in the carcinogenic and anti-carcinogenic intersection. Journal of cancer research and clinical oncology. 2023 Jan; 149(1):483-501. doi: 10.1007/s00432-022-04447-7. [PMID: 36310300]
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