Germacrene B (BioDeep_00000019565)
Secondary id: BioDeep_00000007533, BioDeep_00000638440, BioDeep_00000638443
human metabolite PANOMIX_OTCML-2023 Endogenous
代谢物信息卡片
化学式: C15H24 (204.18779039999998)
中文名称:
谱图信息:
最多检出来源 Homo sapiens(natural_products) 2.94%
分子结构信息
SMILES: CC(=C1CC/C(=C/CC/C(=C/C1)/C)/C)C
InChI: InChI=1S/C15H24/c1-12(2)15-10-8-13(3)6-5-7-14(4)9-11-15/h6,9H,5,7-8,10-11H2,1-4H3/b13-6+,14-9+
描述信息
Constituent of the peel oil of yuzu Citrus junos. Germacrene B is found in many foods, some of which are pepper (spice), lime, citrus, and common oregano.
Germacrene B is found in citrus. Germacrene B is a constituent of the peel oil of yuzu Citrus junos.
同义名列表
12 个代谢物同义名
(1Z,5Z)-1,5-dimethyl-8-(propan-2-ylidene)cyclodeca-1,5-diene; (1E,5E)-8-Isopropylidene-1,5-dimethylcyclodeca-1,5-diene; (1Z,5Z)-8-isopropylidene-1,5-dimethylcyclodeca-1,5-diene; (1E,4E)-Germacra-1(10),4,7(11)-triene; (e,e)-Germacra-1(10),4,7(11)-triene; trans,trans-Germacrene b; (1Z,4Z)-germacrene B; (1E,4E)-Germacrene b; (e,e)-Germacrene b; germacrene B group; Germacratriene; Germacrene B
数据库引用编号
20 个数据库交叉引用编号
- ChEBI: CHEBI:49655
- ChEBI: CHEBI:5337
- KEGG: C09672
- PubChem: 5281519
- PubChem: 6370843
- PubChem: 177602
- HMDB: HMDB0036575
- ChEMBL: CHEMBL448125
- Wikipedia: Germacrene
- MetaCyc: CPD-8744
- KNApSAcK: C00003134
- foodb: FDB015483
- chemspider: 4899018
- CAS: 15423-57-1
- PMhub: MS000020923
- PubChem: 11862
- LipidMAPS: LMPR0103090007
- 3DMET: B03184
- NIKKAJI: J16.137C
- RefMet: Germacrene B
分类词条
相关代谢途径
Reactome(0)
代谢反应
15 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(15)
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (-)-germacrene D + diphosphate
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
87 个相关的物种来源信息
- 49984 - Ajuga chamaepitys: 10.1080/10412905.1999.9701111
- 143780 - Aristolochia elegans: 10.1016/S0031-9422(97)00400-7
- 325095 - Aristolochia littoralis: 10.1016/S0031-9422(97)00400-7
- 4458 - Arum maculatum: 10.1016/0305-1978(95)00026-Q
- 76081 - Asarum caulescens: 10.1248/YAKUSHI1947.94.12_1574
- 41067 - Aspergillus candidus: 10.1016/S0045-6535(99)00015-6
- 76974 - Atalantia buxifolia: 10.1080/10412905.1994.9698400
- 41492 - Bellis perennis: 10.1016/0031-9422(95)00183-8
- 105891 - Callicarpa japonica: 10.1016/S0031-9422(02)00207-8
- 124947 - Cedrela odorata: 10.1590/S0103-50532000000600012
- 103745 - Chromolaena odorata:
- 558547 - Citrus deliciosa: 10.3390/MOLECULES21060814
- 76966 - Citrus japonica: 10.3390/MOLECULES21060814
- 37334 - Citrus maxima: 10.3390/MOLECULES21060814
- 85571 - Citrus reticulata: 10.3390/MOLECULES21060814
- 237574 - Citrus sunki: 10.3390/MOLECULES21060814
- 37690 - Citrus trifoliata: 10.3390/MOLECULES21060814
- 318976 - Commiphora kataf: 10.1016/S0367-326X(01)00367-7
- 318982 - Commiphora myrrha: 10.1016/S0367-326X(01)00367-7
- 318987 - Commiphora sphaerocarpa: 10.1016/S0367-326X(01)00367-7
- 204126 - Condea floribunda: 10.1080/10412905.1997.9700769
- 912350 - Croton argyrophyllus: 10.1021/NP50017A019
- 323040 - Croton conduplicatus: 10.1021/NP50017A019
- 323052 - Croton glandulosus: 10.1021/NP50017A019
- 2815075 - Croton grewioides: 10.1021/NP50017A019
- 765399 - Croton jacobinensis: 10.1021/NP50017A019
- 323069 - Croton micans:
- 2815084 - Croton nepetifolius: 10.1021/NP50017A019
- 323073 - Croton ovalifolius: 10.1002/1099-1026(200005/06)15:3<144::AID-FFJ882>3.0.CO;2-C
- 2743244 - Croton sonderianus: 10.1021/NP50017A019
- 425931 - Croton tricolor: 10.1021/NP50017A019
- 980657 - Cunila microcephala: 10.1016/S0031-9422(96)00726-1
- 136205 - Curcuma aeruginosa: 10.1002/PCA.759
- 136209 - Curcuma aromatica: 10.1002/PCA.759
- 79837 - Cymbopogon martinii: 10.1021/JF00073A015
- 512623 - Cyperus rotundus: 10.3390/MOLECULES14082909
- 179994 - Entandrophragma cylindricum: 10.1080/10412905.1999.9701102
- 119951 - Eugenia uniflora:
- 402568 - Guatteria blepharophylla: 10.1016/J.PHYTOCHEM.2008.03.005
- 462437 - Gynoxys buxifolia: 10.1016/0031-9422(95)00543-G
- 88917 - Hedyosmum bonplandianum: 10.1002/1099-1026(200005/06)15:3<201::AID-FFJ893>3.0.CO;2-I
- 487126 - Hedyosmum mexicanum: 10.1002/1099-1026(200005/06)15:3<201::AID-FFJ893>3.0.CO;2-I
- 2816892 - Heteroplexis microcephala: 10.1021/NP900213W
- 9606 - Homo sapiens: -
- 3486 - Humulus lupulus: 10.1016/S0031-9422(00)85970-1
- 3486 - Humulus lupulus: 10.1021/JF00118A056
- 58039 - Juniperus communis: 10.1021/NP50121A011
- 408997 - Lefebvrea grantii: 10.1080/10412905.1995.9698468
- 56927 - Lepidozia reptans: 10.1016/S0031-9422(96)00482-7
- 1237720 - Lepidozia vitrea: 10.1016/S0031-9422(01)00322-3
- 396495 - Mallotus rhamnifolius: 10.1021/NP50017A019
- 2729092 - Marchantia quadrata: 10.1016/0031-9422(96)00354-8
- 98504 - Matricaria chamomilla: 10.1080/10412905.1998.9700992
- 39338 - Melissa officinalis: 10.1002/FFJ.2730030406
- 294739 - Mentha pulegium: 10.1016/J.PHYTOL.2014.03.007
- 204129 - Mesosphaerum suaveolens: 10.1080/10412905.1994.9699348
- 1127086 - Mikania cordifolia: 10.1016/S0031-9422(00)80558-0
- 39352 - Origanum vulgare: 10.1055/S-2006-957640
- 158596 - Pelargonium endlicherianum: 10.1055/S-2006-960872
- 3435 - Persea americana: 10.1021/JF00035A029
- 408992 - Peucedanum zenkeri: 10.1080/10412905.1995.9698468
- 542674 - Phyla dulcis: 10.1016/S0031-9422(96)00691-7
- 425151 - Piper fimbriulatum: 10.1016/S0031-9422(97)00762-0
- 13216 - Piper nigrum: 10.3390/MOLECULES24234244
- 28511 - Pogostemon cablin: 10.1002/FFJ.2730070608
- 1477715 - Porophyllum angustissimum: 10.1016/0031-9422(83)85053-5
- 1925582 - Prangos heyniae: 10.1002/(SICI)1099-1026(200001/02)15:1<47::AID-FFJ869>3.0.CO;2-9
- 1925587 - Prangos uechtritzii: 10.1055/S-2000-8627
- 246847 - Protium heptaphyllum: 10.1080/10412905.1995.9698581
- 1933698 - Salvia absconditiflora: 10.1080/10412905.1995.9698479
- 1685711 - Salvia atropatana: 10.1080/10412905.2000.9712162
- 260612 - Salvia coccinea: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 49215 - Salvia nemorosa:
- 396869 - Salvia pomifera: 10.1080/10412905.2000.9712167
- 1685717 - Salvia syriaca: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 1298553 - Salvia virgata: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 41644 - Santolina chamaecyparissus: 10.1021/NP50048A037
- 155267 - Sideritis tragoriganum:
- 59297 - Solidago canadensis: 10.1055/S-2006-959673
- 2896588 - Spiranthera odoratissima: 10.1016/S0305-1978(03)00039-5
- 169607 - Tagetes minuta: 10.1007/BF02269705
- 1854046 - Teucrium sandrasicum: 10.1080/10412905.1997.9700774
- 1194133 - Thymus longicaulis: 10.1080/10412905.1994.9698359
- 49992 - Thymus vulgaris: 10.1002/FFJ.3227
- 19953 - Valeriana officinalis: 10.1016/S0031-9422(01)00018-8
- 54477 - Vitex agnus-castus:
- 34245 - Zinnia elegans: 10.1080/10412905.2000.9699552
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
文献列表
- . .
.
. doi:
. [PMID: 9442047]