Germacrene B (BioDeep_00000019565)
Secondary id: BioDeep_00000007533, BioDeep_00000638440, BioDeep_00000638443
human metabolite PANOMIX_OTCML-2023 Endogenous Volatile Flavor Compounds natural product
代谢物信息卡片
化学式: C15H24 (204.18779039999998)
中文名称: 大根香叶烯
谱图信息:
最多检出来源 Viridiplantae(plant) 1.75%
分子结构信息
SMILES: CC(=C1CC/C(=C/CC/C(=C/C1)/C)/C)C
InChI: InChI=1S/C15H24/c1-12(2)15-10-8-13(3)6-5-7-14(4)9-11-15/h6,9H,5,7-8,10-11H2,1-4H3/b13-6+,14-9+
描述信息
Constituent of the peel oil of yuzu Citrus junos. Germacrene B is found in many foods, some of which are pepper (spice), lime, citrus, and common oregano.
Germacrene B is found in citrus. Germacrene B is a constituent of the peel oil of yuzu Citrus junos.
同义名列表
14 个代谢物同义名
(1Z,5Z)-1,5-dimethyl-8-(propan-2-ylidene)cyclodeca-1,5-diene; (1E,5E)-8-Isopropylidene-1,5-dimethylcyclodeca-1,5-diene; (1Z,5Z)-8-isopropylidene-1,5-dimethylcyclodeca-1,5-diene; (1E,4E)-Germacra-1(10),4,7(11)-triene; (e,e)-Germacra-1(10),4,7(11)-triene; trans,trans-Germacrene b; (1Z,4Z)-germacrene B; (1E,4E)-Germacrene b; (e,e)-Germacrene b; germacrene B group; Germacratriene; Germacrene B; Germacrene B; Germacrene B
数据库引用编号
23 个数据库交叉引用编号
- ChEBI: CHEBI:49655
- ChEBI: CHEBI:5337
- KEGG: C09672
- PubChem: 5281519
- PubChem: 6370843
- PubChem: 177602
- HMDB: HMDB0036575
- ChEMBL: CHEMBL448125
- Wikipedia: Germacrene
- MetaCyc: CPD-8744
- KNApSAcK: C00003134
- foodb: FDB015483
- chemspider: 4899018
- CAS: 15423-57-1
- PMhub: MS000020923
- PubChem: 11862
- LipidMAPS: LMPR0103090007
- 3DMET: B03184
- NIKKAJI: J16.137C
- RefMet: Germacrene B
- KNApSAcK: 5337
- LOTUS: LTS0265072
- LOTUS: LTS0205195
分类词条
相关代谢途径
Reactome(0)
代谢反应
15 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(15)
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (E,E)-germacrene B + diphosphate
- germacrene biosynthesis:
(2E,6E)-farnesyl diphosphate ⟶ (-)-germacrene D + diphosphate
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
286 个相关的物种来源信息
- 38595 - Ajuga: LTS0265072
- 49984 - Ajuga chamaepitys: 10.1080/10412905.1999.9701111
- 49984 - Ajuga chamaepitys: LTS0265072
- 128591 - Aniba: LTS0265072
- 4037 - Apiaceae: LTS0265072
- 4454 - Araceae: LTS0265072
- 12947 - Aristolochia: LTS0265072
- 143780 - Aristolochia elegans: 10.1016/S0031-9422(97)00400-7
- 143780 - Aristolochia elegans: LTS0265072
- 325095 - Aristolochia littoralis: 10.1016/S0031-9422(97)00400-7
- 16727 - Aristolochiaceae: LTS0265072
- 6656 - Arthropoda: LTS0265072
- 4457 - Arum: LTS0265072
- 4458 - Arum maculatum: 10.1016/0305-1978(95)00026-Q
- 4458 - Arum maculatum: LTS0265072
- 76081 - Asarum caulescens: 10.1248/YAKUSHI1947.94.12_1574
- 4890 - Ascomycota: LTS0205195
- 4890 - Ascomycota: LTS0265072
- 1131492 - Aspergillaceae: LTS0205195
- 1131492 - Aspergillaceae: LTS0265072
- 5052 - Aspergillus: LTS0205195
- 5052 - Aspergillus: LTS0265072
- 41067 - Aspergillus candidus: 10.1016/S0045-6535(99)00015-6
- 41067 - Aspergillus candidus: LTS0205195
- 41067 - Aspergillus candidus: LTS0265072
- 4210 - Asteraceae: LTS0265072
- 76950 - Atalantia: LTS0265072
- 76974 - Atalantia buxifolia: 10.1080/10412905.1994.9698400
- 76974 - Atalantia buxifolia: LTS0265072
- 41491 - Bellis: LTS0265072
- 41492 - Bellis perennis: 10.1016/0031-9422(95)00183-8
- 41492 - Bellis perennis: LTS0265072
- 3208 - Bryophyta: LTS0265072
- 4014 - Burseraceae: LTS0265072
- 21922 - Callicarpa: LTS0265072
- 105891 - Callicarpa japonica: 10.1016/S0031-9422(02)00207-8
- 105891 - Callicarpa japonica: LTS0265072
- 3481 - Cannabaceae: LTS0265072
- 4200 - Caprifoliaceae: LTS0265072
- 124947 - Cedrela odorata: 10.1590/S0103-50532000000600012
- 16737 - Chloranthaceae: LTS0265072
- 13420 - Chromolaena: LTS0265072
- 103745 - Chromolaena odorata:
- 103745 - Chromolaena odorata: 10.1055/S-2006-959674
- 103745 - Chromolaena odorata: 10.1080/10412905.1992.9698069
- 103745 - Chromolaena odorata: LTS0265072
- 69450 - Cistaceae: LTS0265072
- 69451 - Cistus: LTS0265072
- 191224 - Cistus creticus: 10.1016/J.PHYTOCHEM.2009.06.013
- 191224 - Cistus creticus: LTS0265072
- 393199 - Cistus incanus: 10.1016/J.PHYTOCHEM.2009.06.013
- 393199 - Cistus incanus: LTS0265072
- 2706 - Citrus: LTS0265072
- 159033 - Citrus aurantiifolia: 10.1021/JF00076A019
- 558547 - Citrus deliciosa: 10.3390/MOLECULES21060814
- 76966 - Citrus japonica: 10.3390/MOLECULES21060814
- 37334 - Citrus maxima: 10.3390/MOLECULES21060814
- 85571 - Citrus reticulata: 10.3390/MOLECULES21060814
- 237574 - Citrus sunki: 10.3390/MOLECULES21060814
- 37690 - Citrus trifoliata: 10.3390/MOLECULES21060814
- 43868 - Commiphora: LTS0265072
- 318976 - Commiphora kataf: 10.1016/S0367-326X(01)00367-7
- 318976 - Commiphora kataf: LTS0265072
- 318982 - Commiphora myrrha: 10.1016/S0367-326X(01)00367-7
- 318982 - Commiphora myrrha: LTS0265072
- 318987 - Commiphora sphaerocarpa: 10.1016/S0367-326X(01)00367-7
- 318987 - Commiphora sphaerocarpa: LTS0265072
- 204126 - Condea floribunda: 10.1080/10412905.1997.9700769
- 100370 - Croton: LTS0265072
- 1619393 - Croton acronychioides: 10.1021/NP50017A019
- 1619393 - Croton acronychioides: LTS0265072
- 912350 - Croton argyrophyllus: 10.1021/NP50017A019
- 912350 - Croton argyrophyllus: LTS0265072
- 323040 - Croton conduplicatus: 10.1021/NP50017A019
- 323040 - Croton conduplicatus: LTS0265072
- 323052 - Croton glandulosus: 10.1021/NP50017A019
- 323052 - Croton glandulosus: LTS0265072
- 2815075 - Croton grewioides: 10.1021/NP50017A019
- 765399 - Croton jacobinensis: 10.1021/NP50017A019
- 765399 - Croton jacobinensis: LTS0265072
- 323069 - Croton micans:
- 323069 - Croton micans: 10.1021/NP50017A019
- 323069 - Croton micans: 10.1590/S0103-50532000000600012
- 323069 - Croton micans: LTS0265072
- 2815084 - Croton nepetifolius: 10.1021/NP50017A019
- 2815084 - Croton nepetifolius: LTS0265072
- 323073 - Croton ovalifolius: 10.1002/1099-1026(200005/06)15:3<144::AID-FFJ882>3.0.CO;2-C
- 323073 - Croton ovalifolius: LTS0265072
- 2743244 - Croton sonderianus: 10.1021/NP50017A019
- 2743244 - Croton sonderianus: LTS0265072
- 425931 - Croton tricolor: 10.1021/NP50017A019
- 425931 - Croton tricolor: LTS0265072
- 392618 - Cunila: LTS0265072
- 980657 - Cunila microcephala: 10.1016/S0031-9422(96)00726-1
- 980657 - Cunila microcephala: LTS0265072
- 3367 - Cupressaceae: LTS0265072
- 136205 - Curcuma aeruginosa: 10.1002/PCA.759
- 136209 - Curcuma aromatica: 10.1002/PCA.759
- 66013 - Cymbopogon: LTS0265072
- 79837 - Cymbopogon martinii: 10.1021/JF00073A015
- 79837 - Cymbopogon martinii: LTS0265072
- 4609 - Cyperaceae: LTS0265072
- 4610 - Cyperus: LTS0265072
- 512623 - Cyperus rotundus: 10.3390/MOLECULES14082909
- 512623 - Cyperus rotundus: LTS0265072
- 72926 - Doellingeria: LTS0265072
- 72927 - Doellingeria umbellata: LTS0265072
- 155635 - Entandrophragma: LTS0265072
- 179994 - Entandrophragma cylindricum: 10.1080/10412905.1999.9701102
- 179994 - Entandrophragma cylindricum: LTS0265072
- 119950 - Eugenia: LTS0265072
- 119951 - Eugenia uniflora:
- 119951 - Eugenia uniflora: 10.1055/S-0028-1097540
- 119951 - Eugenia uniflora: 10.1590/S0103-50532010000500012
- 119951 - Eugenia uniflora: LTS0265072
- 2759 - Eukaryota: LTS0205195
- 2759 - Eukaryota: LTS0265072
- 3977 - Euphorbiaceae: LTS0265072
- 147545 - Eurotiomycetes: LTS0205195
- 147545 - Eurotiomycetes: LTS0265072
- 4751 - Fungi: LTS0205195
- 4751 - Fungi: LTS0265072
- 4027 - Geraniaceae: LTS0265072
- 402568 - Guatteria blepharophylla: 10.1016/J.PHYTOCHEM.2008.03.005
- 189216 - Gynoxys: LTS0265072
- 462437 - Gynoxys buxifolia: 10.1016/0031-9422(95)00543-G
- 462437 - Gynoxys buxifolia: LTS0265072
- 13558 - Hedyosmum: LTS0265072
- 88917 - Hedyosmum bonplandianum: 10.1002/1099-1026(200005/06)15:3<201::AID-FFJ893>3.0.CO;2-I
- 88917 - Hedyosmum bonplandianum: LTS0265072
- 487126 - Hedyosmum mexicanum: 10.1002/1099-1026(200005/06)15:3<201::AID-FFJ893>3.0.CO;2-I
- 487126 - Hedyosmum mexicanum: LTS0265072
- 2727855 - Heteroplexis: LTS0265072
- 2816892 - Heteroplexis microcephala: 10.1021/NP900213W
- 2816892 - Heteroplexis microcephala: LTS0265072
- 9606 - Homo sapiens: -
- 3484 - Humulus: LTS0265072
- 3486 - Humulus lupulus: 10.1016/S0031-9422(00)85970-1
- 3486 - Humulus lupulus: 10.1021/JF00118A056
- 3486 - Humulus lupulus: LTS0265072
- 204122 - Hyptis: LTS0265072
- 50557 - Insecta: LTS0265072
- 186771 - Jungermanniopsida: LTS0265072
- 13100 - Juniperus: LTS0265072
- 58039 - Juniperus communis: 10.1021/NP50121A011
- 58039 - Juniperus communis: LTS0265072
- 4136 - Lamiaceae: LTS0265072
- 3433 - Lauraceae: LTS0265072
- 408997 - Lefebvrea grantii: 10.1080/10412905.1995.9698468
- 56926 - Lepidozia: LTS0265072
- 56927 - Lepidozia reptans: 10.1016/S0031-9422(96)00482-7
- 56927 - Lepidozia reptans: LTS0265072
- 1237720 - Lepidozia vitrea: 10.1016/S0031-9422(01)00322-3
- 1237720 - Lepidozia vitrea: LTS0265072
- 13806 - Lepidoziaceae: LTS0265072
- 4447 - Liliopsida: LTS0265072
- 320344 - Lippia: LTS0265072
- 3398 - Magnoliopsida: LTS0265072
- 396495 - Mallotus rhamnifolius: 10.1021/NP50017A019
- 3196 - Marchantia: LTS0265072
- 2729092 - Marchantia quadrata: 10.1016/0031-9422(96)00354-8
- 2729092 - Marchantia quadrata: LTS0265072
- 29585 - Marchantiaceae: LTS0265072
- 3195 - Marchantiophyta: LTS0265072
- 186770 - Marchantiopsida: LTS0265072
- 56016 - Matricaria: LTS0265072
- 98504 - Matricaria chamomilla: 10.1080/10412905.1998.9700992
- 98504 - Matricaria chamomilla: LTS0265072
- 43707 - Meliaceae: LTS0265072
- 39170 - Melissa: LTS0265072
- 39338 - Melissa officinalis: 10.1002/FFJ.2730030406
- 39338 - Melissa officinalis: LTS0265072
- 21819 - Mentha: LTS0265072
- 294739 - Mentha pulegium: 10.1016/J.PHYTOL.2014.03.007
- 294739 - Mentha pulegium: LTS0265072
- 2045129 - Mesosphaerum: LTS0265072
- 204129 - Mesosphaerum suaveolens: 10.1080/10412905.1994.9699348
- 204129 - Mesosphaerum suaveolens: LTS0265072
- 33208 - Metazoa: LTS0265072
- 102786 - Mikania: LTS0265072
- 1127086 - Mikania cordifolia: 10.1016/S0031-9422(00)80558-0
- 1127086 - Mikania cordifolia: LTS0265072
- 3931 - Myrtaceae: LTS0265072
- 39174 - Origanum: LTS0265072
- 39352 - Origanum vulgare: 10.1055/S-2006-957640
- 39352 - Origanum vulgare: LTS0265072
- 497765 - Origanum vulgare subsp. virens: 10.1016/S0031-9422(97)00926-6
- 497765 - Origanum vulgare subsp. virens: LTS0265072
- 4030 - Pelargonium: LTS0265072
- 158596 - Pelargonium endlicherianum: 10.1055/S-2006-960872
- 158596 - Pelargonium endlicherianum: LTS0265072
- 3434 - Persea: LTS0265072
- 3435 - Persea americana: 10.1021/JF00035A029
- 3435 - Persea americana: LTS0265072
- 49562 - Peucedanum: LTS0265072
- 408992 - Peucedanum zenkeri: 10.1080/10412905.1995.9698468
- 408992 - Peucedanum zenkeri: LTS0265072
- 86858 - Phyla: LTS0265072
- 542674 - Phyla dulcis: 10.1016/S0031-9422(96)00691-7
- 542674 - Phyla dulcis: LTS0265072
- 58019 - Pinopsida: LTS0265072
- 13215 - Piper: LTS0265072
- 425151 - Piper fimbriulatum: 10.1016/S0031-9422(97)00762-0
- 425151 - Piper fimbriulatum: LTS0265072
- 13216 - Piper nigrum: 10.3390/MOLECULES24234244
- 16739 - Piperaceae: LTS0265072
- 4479 - Poaceae: LTS0265072
- 21861 - Pogostemon: LTS0265072
- 28511 - Pogostemon cablin: 10.1002/FFJ.2730070608
- 28511 - Pogostemon cablin: LTS0265072
- 169597 - Porophyllum: LTS0265072
- 1477715 - Porophyllum angustissimum: 10.1016/0031-9422(83)85053-5
- 1477715 - Porophyllum angustissimum: LTS0265072
- 52496 - Prangos: LTS0265072
- 1925582 - Prangos heyniae: 10.1002/(SICI)1099-1026(200001/02)15:1<47::AID-FFJ869>3.0.CO;2-9
- 1925582 - Prangos heyniae: LTS0265072
- 1925587 - Prangos uechtritzii: 10.1055/S-2000-8627
- 1925587 - Prangos uechtritzii: LTS0265072
- 53028 - Preissia: LTS0265072
- 173697 - Protium: LTS0265072
- 246847 - Protium heptaphyllum: 10.1080/10412905.1995.9698581
- 246847 - Protium heptaphyllum: LTS0265072
- 23513 - Rutaceae: LTS0265072
- 21880 - Salvia: LTS0265072
- 1933698 - Salvia absconditiflora: 10.1080/10412905.1995.9698479
- 1933698 - Salvia absconditiflora: LTS0265072
- 1685711 - Salvia atropatana: 10.1080/10412905.2000.9712162
- 1685711 - Salvia atropatana: LTS0265072
- 260612 - Salvia coccinea: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 49215 - Salvia nemorosa:
- 49215 - Salvia nemorosa: 10.1002/(SICI)1099-1026(199907/08)14:4<230::AID-FFJ816>3.0.CO;2-L
- 49215 - Salvia nemorosa: LTS0265072
- 396869 - Salvia pomifera: 10.1080/10412905.2000.9712167
- 396869 - Salvia pomifera: LTS0265072
- 1685717 - Salvia syriaca: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 1685717 - Salvia syriaca: LTS0265072
- 1298553 - Salvia virgata: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 1298553 - Salvia virgata: LTS0265072
- 588963 - Salvia × superba: 10.1002/(SICI)1099-1026(199901/02)14:1<45::AID-FFJ774>3.0.CO;2-S
- 268931 - Salvia × sylvestris: 10.1002/(SICI)1099-1026(199907/08)14:4<230::AID-FFJ816>3.0.CO;2-L
- 41642 - Santolina: LTS0265072
- 41644 - Santolina chamaecyparissus: 10.1021/NP50048A037
- 41644 - Santolina chamaecyparissus: LTS0265072
- 76973 - Severinia: LTS0265072
- 155231 - Sideritis: LTS0265072
- 155267 - Sideritis tragoriganum:
- 155267 - Sideritis tragoriganum: 10.1016/B978-0-444-88558-6.50020-9
- 155267 - Sideritis tragoriganum: 10.1055/S-2000-9780
- 155267 - Sideritis tragoriganum: LTS0265072
- 59293 - Solidago: LTS0265072
- 59297 - Solidago canadensis: 10.1055/S-2006-959673
- 59297 - Solidago canadensis: LTS0265072
- 2054574 - Spiranthera: LTS0265072
- 2896588 - Spiranthera odoratissima: 10.1016/S0305-1978(03)00039-5
- 2896588 - Spiranthera odoratissima: LTS0265072
- 35493 - Streptophyta: LTS0265072
- 27474 - Tachinidae: LTS0265072
- 13707 - Tagetes: LTS0265072
- 169607 - Tagetes minuta: 10.1007/BF02269705
- 169607 - Tagetes minuta: LTS0265072
- 21896 - Teucrium: LTS0265072
- 1854046 - Teucrium sandrasicum: 10.1080/10412905.1997.9700774
- 1854046 - Teucrium sandrasicum: LTS0265072
- 49990 - Thymus: LTS0265072
- 1194133 - Thymus longicaulis: 10.1080/10412905.1994.9698359
- 1194133 - Thymus longicaulis: LTS0265072
- 49992 - Thymus vulgaris: 10.1002/FFJ.3227
- 49992 - Thymus vulgaris: LTS0265072
- 58023 - Tracheophyta: LTS0265072
- 28568 - Trichocomaceae: LTS0205195
- 28568 - Trichocomaceae: LTS0265072
- 19952 - Valeriana: LTS0265072
- 19953 - Valeriana officinalis: 10.1016/S0031-9422(01)00018-8
- 19953 - Valeriana officinalis: LTS0265072
- 19944 - Valerianaceae: LTS0265072
- 21910 - Verbenaceae: LTS0265072
- 33090 - Viridiplantae: LTS0265072
- 54476 - Vitex: LTS0265072
- 54477 - Vitex agnus-castus:
- 54477 - Vitex agnus-castus: 10.1002/(SICI)1097-0231(199608)10:11<1345::AID-RCM631>3.0.CO;2-4
- 54477 - Vitex agnus-castus: 10.1002/RCM.1290091307
- 54477 - Vitex agnus-castus: 10.1055/S-2006-957814
- 54477 - Vitex agnus-castus: LTS0265072
- 19013 - Zinnia: LTS0265072
- 34245 - Zinnia elegans: 10.1080/10412905.2000.9699552
- 34245 - Zinnia elegans: LTS0265072
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
文献列表
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. doi:
. [PMID: 9442047]