delta-Valerolactone (BioDeep_00001868387)

Main id: BioDeep_00000004881

 

PANOMIX_OTCML-2023 natural product BioNovoGene_Lab2019


代谢物信息卡片


delta-Valerolactone

化学式: C5H8O2 (100.0524)
中文名称: δ-戊内酯
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1CCOC(=O)C1
InChI: InChI=1S/C5H8O2/c6-5-3-1-2-4-7-5/h1-4H2

描述信息

Tetrahydro-2H-pyran-2-one is an endogenous metabolite.

同义名列表

5 个代谢物同义名

delta-Valerolactone; δ-valerolactone; Tetrahydro-2H-pyran-2-one; 5-Valerolactone; delta-Valerolactone



数据库引用编号

14 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

13 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 6 ALB, ANXA5, AR, EVL, LDHA, WDHD1
Peripheral membrane protein 2 ANXA5, PLOD2
Endoplasmic reticulum membrane 1 PLOD2
Nucleus 5 ALB, AR, DACH1, LDHA, PARP1
cytosol 9 ALB, ANXA5, AR, DACH1, EPHX2, EVL, LDHA, LIPE, PARP1
nuclear body 1 PARP1
centrosome 1 ALB
nucleoplasm 4 AR, DACH1, PARP1, WDHD1
Cell membrane 3 ITGAM, LIPE, TSPAN17
lamellipodium 1 EVL
Multi-pass membrane protein 1 TSPAN17
Synapse 1 ALDH5A1
cell surface 1 ITGAM
Golgi apparatus 2 ALB, DACH1
lysosomal membrane 1 EGF
sarcolemma 1 ANXA5
Cytoplasm, cytosol 2 LIPE, PARP1
plasma membrane 6 AR, CSF2, EGF, ITGAM, ME2, TSPAN17
Membrane 10 ANXA5, AR, EGF, EVL, ITGAM, LDHA, LIPE, ME2, PARP1, TSPAN17
caveola 1 LIPE
extracellular exosome 7 ALB, ANXA5, EGF, EPHX2, ITGAM, LDHA, PLOD2
Lumenal side 1 PLOD2
endoplasmic reticulum 2 ALB, PLOD2
extracellular space 5 ALB, CSF2, CSF3, EGF, ITGAM
lysosomal lumen 1 CSF3
mitochondrion 5 ABAT, ALDH5A1, LDHA, ME2, PARP1
protein-containing complex 3 ALB, AR, PARP1
intracellular membrane-bounded organelle 2 CSF2, ME2
Single-pass type I membrane protein 1 ITGAM
Secreted 3 ALB, CSF2, CSF3
extracellular region 5 ALB, ANXA5, CSF2, CSF3, EGF
Single-pass membrane protein 1 ME2
Mitochondrion matrix 1 ME2
mitochondrial matrix 3 ABAT, ALDH5A1, ME2
anchoring junction 1 ALB
transcription regulator complex 2 DACH1, PARP1
external side of plasma membrane 2 ANXA5, ITGAM
nucleolus 1 PARP1
Cell projection, lamellipodium 1 EVL
Membrane raft 1 ITGAM
Cytoplasm, cytoskeleton 1 EVL
focal adhesion 2 ANXA5, EVL
Peroxisome 1 EPHX2
peroxisomal matrix 1 EPHX2
collagen-containing extracellular matrix 1 ANXA5
nuclear speck 2 AR, DACH1
Zymogen granule membrane 1 ANXA5
ciliary basal body 1 ALB
chromatin 2 AR, PARP1
cell projection 1 EVL
Chromosome 1 PARP1
cytoskeleton 1 EVL
centriole 1 ALB
Nucleus, nucleolus 1 PARP1
spindle pole 1 ALB
nuclear replication fork 2 PARP1, WDHD1
chromosome, telomeric region 1 PARP1
blood microparticle 1 ALB
site of double-strand break 1 PARP1
nuclear envelope 1 PARP1
Lipid droplet 1 LIPE
Membrane, caveola 1 LIPE
Nucleus, nucleoplasm 1 WDHD1
specific granule membrane 1 ITGAM
tertiary granule membrane 1 ITGAM
stress fiber 1 EVL
plasma membrane raft 1 ITGAM
endoplasmic reticulum lumen 1 ALB
platelet alpha granule lumen 2 ALB, EGF
rough endoplasmic reticulum membrane 1 PLOD2
vesicle membrane 1 ANXA5
clathrin-coated endocytic vesicle membrane 1 EGF
Cytoplasm, cytoskeleton, stress fiber 1 EVL
protein-DNA complex 1 PARP1
Rough endoplasmic reticulum 1 PLOD2
granulocyte macrophage colony-stimulating factor receptor complex 1 CSF2
site of DNA damage 1 PARP1
integrin complex 1 ITGAM
oxidoreductase complex 1 LDHA
endocytic vesicle lumen 1 CSF3
integrin alphaM-beta2 complex 1 ITGAM
endothelial microparticle 1 ANXA5
[Poly [ADP-ribose] polymerase 1, processed N-terminus]: Chromosome 1 PARP1
[Poly [ADP-ribose] polymerase 1, processed C-terminus]: Cytoplasm 1 PARP1
ciliary transition fiber 1 ALB
4-aminobutyrate transaminase complex 1 ABAT


文献列表

  • Zeqing Bao, Sungmin Jung, Jack Bufton, James C Evans, Dean J Aguiar, Christine Allen. Poly(δ-valerolactone-co-allyl-δ-valerolactone) cross-linked microparticles: Formulation, characterization and biocompatibility. Journal of pharmaceutical sciences. 2021 07; 110(7):2771-2777. doi: 10.1016/j.xphs.2021.03.009. [PMID: 33737020]
  • Ashish B Deshpande, Hemangi G Chidley, Pranjali S Oak, Keshav H Pujari, Ashok P Giri, Vidya S Gupta. Isolation and characterization of 9-lipoxygenase and epoxide hydrolase 2 genes: Insight into lactone biosynthesis in mango fruit (Mangifera indica L.). Phytochemistry. 2017 Jun; 138(?):65-75. doi: 10.1016/j.phytochem.2017.03.002. [PMID: 28291596]
  • Justin J J van der Hooft, Ric C H de Vos, Velitchka Mihaleva, Raoul J Bino, Lars Ridder, Niels de Roo, Doris M Jacobs, John P M van Duynhoven, Jacques Vervoort. Structural elucidation and quantification of phenolic conjugates present in human urine after tea intake. Analytical chemistry. 2012 Aug; 84(16):7263-71. doi: 10.1021/ac3017339. [PMID: 22827565]
  • Sung-Hee Cho, Eun-Jung Park, Eun-Ok Kim, Sang-Won Choi. Study on the hypochlolesterolemic and antioxidative effects of tyramine derivatives from the root bark of Lycium chenese Miller. Nutrition research and practice. 2011 Oct; 5(5):412-20. doi: 10.4162/nrp.2011.5.5.412. [PMID: 22125678]
  • Daniele Del Rio, Angelique Stalmach, Luca Calani, Alan Crozier. Bioavailability of coffee chlorogenic acids and green tea flavan-3-ols. Nutrients. 2010 08; 2(8):820-33. doi: 10.3390/nu2080820. [PMID: 22254058]
  • Wen-Jen Lin, Yi-Chen Chen, Chi-Chang Lin, Chau-Fong Chen, Ji-Wang Chen. Characterization of pegylated copolymeric micelles and in vivo pharmacokinetics and biodistribution studies. Journal of biomedical materials research. Part B, Applied biomaterials. 2006 Apr; 77(1):188-94. doi: 10.1002/jbm.b.30418. [PMID: 16245284]
  • Tanja Grimm, Zuzana Chovanová, Jana Muchová, Katarína Sumegová, Anna Liptáková, Zdenka Duracková, Petra Högger. Inhibition of NF-kappaB activation and MMP-9 secretion by plasma of human volunteers after ingestion of maritime pine bark extract (Pycnogenol). Journal of inflammation (London, England). 2006 Jan; 3(?):1. doi: 10.1186/1476-9255-3-1. [PMID: 16441890]
  • Leonid Gaidukov, Dan S Tawfik. High affinity, stability, and lactonase activity of serum paraoxonase PON1 anchored on HDL with ApoA-I. Biochemistry. 2005 Sep; 44(35):11843-54. doi: 10.1021/bi050862i. [PMID: 16128586]
  • Laureen J Marinetti, Daniel S Isenschmid, Bradford R Hepler, Sawait Kanluen. Analysis of GHB and 4-methyl-GHB in postmortem matrices after long-term storage. Journal of analytical toxicology. 2005 Jan; 29(1):41-7. doi: 10.1093/jat/29.1.41. [PMID: 15808012]