Virginiamycin m1 (BioDeep_00000184966)

   

human metabolite blood metabolite Chemicals and Drugs


代谢物信息卡片


21-hydroxy-11,19-dimethyl-10-propan-2-yl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.03,7]octacosa-1(27),6,12,17,19,25(28)-hexaene-2,8,14,23-tetrone

化学式: C28H35N3O7 (525.2475)
中文名称: 维吉尼霉素M1
谱图信息: 最多检出来源 Mus musculus(blood) 100%

Reviewed

Last reviewed on 2025-02-12.

Cite this Page

Virginiamycin m1. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/virginiamycin_m1 (retrieved 2025-04-15) (BioDeep RN: BioDeep_00000184966). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: CC(C)C1OC(=O)C2=CCCN2C(=O)C2=COC(CC(=O)CC(O)C=C(C)C=CCNC(=O)C=CC1C)=N2
InChI: InChI=1S/C28H35N3O7/c1-17(2)26-19(4)9-10-24(34)29-11-5-7-18(3)13-20(32)14-21(33)15-25-30-22(16-37-25)27(35)31-12-6-8-23(31)28(36)38-26/h5,7-10,13,16-17,19-20,26,32H,6,11-12,14-15H2,1-4H3,(H,29,34)

描述信息

Virginiamycin M1 is an antibiotic belonging to the macrolide class, specifically classified under the streptogramin A group. It is produced by the bacterium Streptomyces virginiae. Virginiamycin M1 is also known as Pristinamycin IIA.
Chemical and Structural Characteristics:
Virginiamycin M1 has a complex chemical structure characterized by a macrocyclic lactone ring, which is a hallmark of macrolide antibiotics.
Its molecular formula is C28H35N3O7, and it has a molecular weight of approximately 525.59 g/mol.
Mechanism of Action:
Like other macrolides, Virginiamycin M1 inhibits bacterial protein synthesis by binding to the 50S ribosomal subunit of susceptible bacteria. This action prevents the translocation step in protein elongation, thereby inhibiting bacterial growth.
Antibacterial Spectrum:
Virginiamycin M1 is effective against a range of Gram-positive bacteria, including strains like Staphylococcus aureus and Streptococcus pneumoniae.
It is particularly noted for its activity against certain multidrug-resistant bacteria, making it a valuable option in veterinary medicine and sometimes in human medicine for specific indications.
Uses:
Primarily, Virginiamycin M1 is used in veterinary medicine as a growth promoter and for the prevention and treatment of bacterial infections in livestock.
In some cases, it is used in human medicine, although its use is more restricted due to the potential for developing resistance.
Resistance and Pharmacokinetics:
The use of Virginiamycin M1 can lead to the development of bacterial resistance, particularly if used improperly or excessively.
Its pharmacokinetics involve good absorption and distribution in tissues, although specific details can vary depending on the species and route of administration.
Safety and Side Effects:
In veterinary use, Virginiamycin M1 is generally considered safe when used according to guidelines.
Potential side effects in animals can include gastrointestinal disturbances, but these are relatively rare.
Regulatory Status:
The use of Virginiamycin M1 is regulated differently in various countries. In some regions, it is approved for use in animal feed to promote growth and prevent diseases, while in others, its use may be more restricted due to concerns about antibiotic resistance.
Research and Development:
Ongoing research is focused on understanding the mechanisms of action and resistance, as well as exploring potential new applications or formulations to improve its efficacy and safety.

同义名列表

3 个代谢物同义名

21-hydroxy-11,19-dimethyl-10-(propan-2-yl)-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.0³,⁷]octacosa-1(27),6,12,17,19,25(28)-hexaene-2,8,14,23-tetrone; 21-hydroxy-10-isopropyl-11,19-dimethyl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.0³,⁷]octacosa-1(27),6,12,17,19,25(28)-hexaene-2,8,14,23-tetrone; Virginiamycin M1



数据库引用编号

5 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 2 MEFV, TXN
Peripheral membrane protein 1 ATP6V1D
Endosome membrane 1 ATP6V1D
Cytoplasmic vesicle, autophagosome 1 MEFV
Nucleus 2 MEFV, TXN
autophagosome 1 MEFV
cytosol 3 ATP6V1D, MEFV, TXN
dendrite 1 ACVRL1
mitochondrial membrane 1 MAVS
centrosome 1 ATP6V1D
nucleoplasm 4 ATP2B1, ATP6V1D, MEFV, TXN
Cell membrane 3 ABCB5, ACVRL1, ATP2B1
Cytoplasmic side 1 ATP6V1D
lamellipodium 1 MEFV
Multi-pass membrane protein 2 ABCB5, ATP2B1
Synapse 1 ATP2B1
cell surface 1 ACVRL1
glutamatergic synapse 1 ATP2B1
Golgi membrane 1 ATP6V1D
lysosomal membrane 1 ATP6V1D
neuronal cell body 1 ACVRL1
presynaptic membrane 1 ATP2B1
plasma membrane 4 ABCB5, ACVRL1, ATP2B1, ATP6V1D
synaptic vesicle membrane 1 ATP2B1
Membrane 5 ABCB5, ACVRL1, ATP2B1, ATP6V1D, TMPRSS15
axon 1 CCK
basolateral plasma membrane 1 ATP2B1
brush border 1 TMPRSS15
extracellular exosome 3 ATP2B1, ATP6V1D, TXN
extracellular space 2 CCK, GAST
mitochondrion 1 MAVS
intracellular membrane-bounded organelle 1 ATP2B1
Single-pass type I membrane protein 1 ACVRL1
Secreted 3 CCK, GAST, TXN
extracellular region 3 CCK, GAST, TXN
Mitochondrion outer membrane 1 MAVS
Single-pass membrane protein 1 MAVS
mitochondrial outer membrane 1 MAVS
Cell projection, cilium 1 ATP6V1D
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 ATP6V1D
Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane 1 ATP2B1
cytoplasmic vesicle 1 MEFV
Cytoplasmic vesicle, clathrin-coated vesicle membrane 1 ATP6V1D
clathrin-coated vesicle membrane 1 ATP6V1D
Single-pass type II membrane protein 1 TMPRSS15
Cell projection, lamellipodium 1 MEFV
microtubule 1 MEFV
Peroxisome 1 MAVS
peroxisomal membrane 1 MAVS
lateral plasma membrane 1 ATP2B1
Cell projection, ruffle 1 MEFV
ruffle 1 MEFV
cilium 1 ATP6V1D
microtubule associated complex 1 MEFV
cell projection 1 ATP2B1
Basolateral cell membrane 1 ATP2B1
specific granule membrane 1 ATP6V1D
Presynaptic cell membrane 1 ATP2B1
ubiquitin ligase complex 1 MAVS
extrinsic component of synaptic vesicle membrane 1 ATP6V1D
immunological synapse 1 ATP2B1
[Isoform 2]: Nucleus 1 MEFV
[Isoform 1]: Cytoplasm, cytoskeleton 1 MEFV
canonical inflammasome complex 1 MEFV
vacuolar proton-transporting V-type ATPase, V1 domain 1 ATP6V1D
proton-transporting V-type ATPase complex 1 ATP6V1D
photoreceptor ribbon synapse 1 ATP2B1
BMP receptor complex 1 ACVRL1


文献列表

  • Xiaoyang Wang, Mi Wang, Keyu Zhang, Ting Hou, Lifang Zhang, Chenzong Fei, Feiqun Xue, Taijun Hang. Determination of virginiamycin M1 residue in tissues of swine and chicken by ultra-performance liquid chromatography tandem mass spectrometry. Food chemistry. 2018 Jun; 250(?):127-133. doi: 10.1016/j.foodchem.2018.01.024. [PMID: 29412901]
  • Lei Li, Yawei Zhao, Lijun Ruan, Sheng Yang, Mei Ge, Weihong Jiang, Yinhua Lu. A stepwise increase in pristinamycin II biosynthesis by Streptomyces pristinaespiralis through combinatorial metabolic engineering. Metabolic engineering. 2015 May; 29(?):12-25. doi: 10.1016/j.ymben.2015.02.001. [PMID: 25708513]
  • Junling Dun, Yawei Zhao, Guosong Zheng, Hong Zhu, Lijun Ruan, Wenfang Wang, Mei Ge, Weihong Jiang, Yinhua Lu. PapR6, a putative atypical response regulator, functions as a pathway-specific activator of pristinamycin II biosynthesis in Streptomyces pristinaespiralis. Journal of bacteriology. 2015 Feb; 197(3):441-50. doi: 10.1128/jb.02312-14. [PMID: 25404695]
  • Amani D Politano, Robert G Sawyer. NXL-103, a combination of flopristin and linopristin, for the potential treatment of bacterial infections including community-acquired pneumonia and MRSA. Current opinion in investigational drugs (London, England : 2000). 2010 Feb; 11(2):225-36. doi: . [PMID: 20112172]