Cembrene (BioDeep_00000008941)

 

Secondary id: BioDeep_00001872316

human metabolite PANOMIX_OTCML-2023 Endogenous


代谢物信息卡片


(1E,3Z,6E,10E,14S)-3,7,11-Trimethyl-14-(1-methylethyl)-1,3,6,10-cyclotetradecatetraene

化学式: C20H32 (272.2504)
中文名称: 西松烯
谱图信息: 最多检出来源 Homo sapiens(otcml) 25.19%

分子结构信息

SMILES: C1(CCC(C)=CCCC(C)=CCC=C(C)C=C1)C(C)C
InChI: InChI=1S/C20H32/c1-16(2)20-14-12-18(4)10-6-8-17(3)9-7-11-19(5)13-15-20/h8,10-12,14,16,20H,6-7,9,13,15H2,1-5H3/b14-12+,17-8+,18-10-,19-11+

描述信息

Cembrene is found in fats and oils. Cembrene is a constituent of oil of Pinus koraiensis (Korean pine) Cembrene A, or sometimes neocembrene, is a natural monocyclic diterpene isolated from corals of the genus Nephthea. It is a colorless oil with a faint wax-like odor.

同义名列表

13 个代谢物同义名

(1E,3Z,6E,10E,14S)-3,7,11-Trimethyl-14-(1-methylethyl)-1,3,6,10-cyclotetradecatetraene; (1E,3Z,6E,10E,14S)-3,7,11-trimethyl-14-(propan-2-yl)cyclotetradeca-1,3,6,10-tetraene; (1E,3Z,6E,10E,14S)-14-isopropyl-3,7,11-trimethylcyclotetradeca-1,3,6,10-tetraene; (S)-(+)-Cembrene; (+)-Thunbergene; (+)-Thunbergen; 1(S)-Cembrene; (+)-Cembrene; Thunbergene; Thunbergen; Cembrene; Cembrene; (+)-Cembrene



数据库引用编号

19 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

13 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 3 ANXA5, EGFR, TUBB4B
Peripheral membrane protein 2 ANXA5, GBA1
Endosome membrane 1 EGFR
Endoplasmic reticulum membrane 1 EGFR
Nucleus 2 EGFR, TUBB4B
cytosol 2 ANXA5, TUBB4B
trans-Golgi network 1 GBA1
Cell membrane 1 EGFR
ruffle membrane 1 EGFR
Early endosome membrane 1 EGFR
cell junction 1 EGFR
cell surface 1 EGFR
glutamatergic synapse 1 EGFR
Golgi apparatus 1 GBA1
Golgi membrane 2 EGFR, INS
lysosomal membrane 1 GBA1
sarcolemma 1 ANXA5
Lysosome 1 GBA1
endosome 1 EGFR
plasma membrane 1 EGFR
Membrane 2 ANXA5, EGFR
apical plasma membrane 1 EGFR
basolateral plasma membrane 1 EGFR
extracellular exosome 3 ANXA5, GBA1, TUBB4B
Lysosome membrane 1 GBA1
Lumenal side 1 GBA1
endoplasmic reticulum 1 GBA1
extracellular space 2 EGFR, INS
lysosomal lumen 1 GBA1
perinuclear region of cytoplasm 1 EGFR
protein-containing complex 1 EGFR
Single-pass type I membrane protein 1 EGFR
Secreted 1 INS
extracellular region 3 ANXA5, INS, TUBB4B
nuclear membrane 1 EGFR
external side of plasma membrane 1 ANXA5
Extracellular vesicle 1 TUBB4B
microtubule cytoskeleton 1 TUBB4B
Membrane raft 1 EGFR
Cytoplasm, cytoskeleton 1 TUBB4B
focal adhesion 2 ANXA5, EGFR
microtubule 1 TUBB4B
intracellular vesicle 1 EGFR
collagen-containing extracellular matrix 1 ANXA5
receptor complex 1 EGFR
Zymogen granule membrane 1 ANXA5
mitotic spindle 1 TUBB4B
cytoskeleton 1 TUBB4B
intercellular bridge 1 TUBB4B
Cytoplasm, cytoskeleton, flagellum axoneme 1 TUBB4B
sperm flagellum 1 TUBB4B
endosome lumen 1 INS
axonemal microtubule 1 TUBB4B
basal plasma membrane 1 EGFR
synaptic membrane 1 EGFR
secretory granule lumen 1 INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 1 INS
transport vesicle 1 INS
azurophil granule lumen 1 TUBB4B
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
vesicle membrane 1 ANXA5
clathrin-coated endocytic vesicle membrane 1 EGFR
multivesicular body, internal vesicle lumen 1 EGFR
Shc-EGFR complex 1 EGFR
endothelial microparticle 1 ANXA5


文献列表

  • Shujuan Chen, Jiajia Liu, Hanxiang Gong, Dongliang Yang. [Identification and antibacterial activity of secondary metabolites from Taxus endophytic fungus]. Sheng wu gong cheng xue bao = Chinese journal of biotechnology. 2009 Mar; 25(3):368-74. doi: . [PMID: 19621576]
  • Shi Bai, Mahendra Jain. 1H and 13C assignments of five cembrenes from guggul. Magnetic resonance in chemistry : MRC. 2008 Aug; 46(8):791-3. doi: 10.1002/mrc.2252. [PMID: 18470886]
  • Eric Ducos, Staffan Fraysse, Marc Boutry. NtPDR3, an iron-deficiency inducible ABC transporter in Nicotiana tabacum. FEBS letters. 2005 Dec; 579(30):6791-5. doi: 10.1016/j.febslet.2005.11.014. [PMID: 16337204]
  • Shu Wei, Ira Marton, Mara Dekel, Dror Shalitin, Efraim Lewinsohn, Ben-Ami Bravdo, Oded Shoseyov. Manipulating volatile emission in tobacco leaves by expressing Aspergillus nigerbeta-glucosidase in different subcellular compartments. Plant biotechnology journal. 2004 Jul; 2(4):341-50. doi: 10.1111/j.1467-7652.2004.00077.x. [PMID: 17134395]