Previtamin D3 (BioDeep_00000006579)

 

Secondary id: BioDeep_00001869182

human metabolite Endogenous


代谢物信息卡片


(1S)-3-[(Z)-2-[(1R,7aR)-7a-methyl-1-[(2R)-6-methylheptan-2-yl]-2,3,3a,6,7,7a-hexahydro-1H-inden-4-yl]ethenyl]-4-methylcyclohex-3-en-1-ol

化学式: C27H44O (384.3392)
中文名称: 3Β,6Z-9,10-断胆甾基-5(10),6,8-三烯甘油酯-3
谱图信息: 最多检出来源 Homo sapiens(not specific) 16.04%

分子结构信息

SMILES: CC(C)CCC[C@@H](C)[C@H]1CCC2([H])C(=CCC[C@]12C)\C=C/C1=C(C)CC[C@H](O)C1
InChI: InChI=1S/C27H44O/c1-19(2)8-6-9-21(4)25-15-16-26-22(10-7-17-27(25,26)5)12-13-23-18-24(28)14-11-20(23)3/h10,12-13,19,21,24-26,28H,6-9,11,14-18H2,1-5H3/t21-,24+,25-,26?,27-/m1/s1



数据库引用编号

19 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

1 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(1)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 7 BGLAP, IVL, KRT1, KRT10, KRT14, PSMA1, VDR
Peripheral membrane protein 4 CYP11A1, CYP1B1, CYP27A1, GORASP1
Endoplasmic reticulum membrane 1 CYP1B1
Mitochondrion membrane 2 CYP11A1, CYP27A1
Nucleus 7 FLG, KRT1, KRT10, KRT14, PSMA1, RORA, VDR
cytosol 8 FLG, IVL, KRT1, KRT10, KRT14, PSMA1, TGM1, VDR
dendrite 1 BGLAP
nuclear body 1 IVL
centrosome 2 IVL, PSMA1
nucleoplasm 3 PSMA1, RORA, VDR
RNA polymerase II transcription regulator complex 1 VDR
Cell membrane 2 KRT1, TNF
Lipid-anchor 1 TGM1
Cytoplasmic side 1 GORASP1
Cytoplasmic granule 1 FLG
Golgi apparatus membrane 1 GORASP1
cell surface 2 KRT10, TNF
glutamatergic synapse 1 FLG
Golgi apparatus 1 GORASP1
Golgi membrane 1 GORASP1
mitochondrial inner membrane 3 CYP11A1, CYP24A1, CYP27A1
neuronal cell body 1 TNF
postsynapse 1 FLG
plasma membrane 4 FLG, KRT1, TGM1, TNF
Membrane 6 CYP11A1, CYP1B1, FLG, KRT1, KRT10, TGM1
extracellular exosome 6 IVL, KRT1, KRT10, KRT14, PSMA1, TGM1
extracellular space 8 BGLAP, IL10, IL17A, IL4, KRT1, KRT10, PTH, TNF
mitochondrion 4 CYP11A1, CYP1B1, CYP24A1, CYP27A1
intracellular membrane-bounded organelle 1 CYP1B1
Microsome membrane 1 CYP1B1
Secreted 4 BGLAP, IL10, IL17A, IL4
extracellular region 9 BGLAP, FLG, IL10, IL17A, IL4, KRT1, KRT10, PTH, TNF
basal part of cell 1 KRT14
mitochondrial matrix 2 CYP11A1, CYP27A1
external side of plasma membrane 2 IL17A, TNF
perikaryon 1 BGLAP
cytoplasmic vesicle 1 FLG
nucleolus 1 RORA
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
vesicle 1 BGLAP
Mitochondrion inner membrane 2 CYP11A1, CYP27A1
Membrane raft 1 TNF
cis-Golgi network 1 GORASP1
collagen-containing extracellular matrix 2 FLG, KRT1
intermediate filament 2 KRT10, KRT14
receptor complex 2 FLG, VDR
chromatin 2 RORA, VDR
phagocytic cup 1 TNF
cytoskeleton 3 KRT1, KRT10, KRT14
cytoplasmic ribonucleoprotein granule 1 FLG
Secreted, extracellular space 1 KRT10
blood microparticle 1 KRT1
Cornified envelope 6 FLG, IVL, KRT1, KRT10, KRT14, TGM1
ficolin-1-rich granule lumen 1 KRT1
proteasome complex 1 PSMA1
Golgi lumen 1 BGLAP
endoplasmic reticulum lumen 1 BGLAP
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 GORASP1
Golgi apparatus, cis-Golgi network membrane 1 GORASP1
proteasome core complex 1 PSMA1
proteasome core complex, alpha-subunit complex 1 PSMA1
keratin filament 3 KRT1, KRT10, KRT14
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
keratohyalin granule 1 FLG
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Andrzej T Slominski, Tae-Kang Kim, Radomir M Slominski, Yuwei Song, Zorica Janjetovic, Ewa Podgorska, Sivani B Reddy, Yuhua Song, Chander Raman, Edith K Y Tang, Adrian Fabisiak, Pawel Brzeminski, Rafal R Sicinski, Venkatram Atigadda, Anton M Jetten, Michael F Holick, Robert C Tuckey. Metabolic activation of tachysterol3 to biologically active hydroxyderivatives that act on VDR, AhR, LXRs, and PPARγ receptors. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2022 08; 36(8):e22451. doi: 10.1096/fj.202200578r. [PMID: 35838947]
  • Danielle L Sofferman, Arkaprabha Konar, Joseph N Mastron, Kenneth G Spears, Cecilia Cisneros, Adam C Smith, Enrico Tapavicza, Roseanne J Sension. Probing the Formation and Conformational Relaxation of Previtamin D3 and Analogues in Solution and in Lipid Bilayers. The journal of physical chemistry. B. 2021 09; 125(36):10085-10096. doi: 10.1021/acs.jpcb.1c04376. [PMID: 34473504]
  • Robert C Tuckey, Wei Li, Dejian Ma, Chloe Y S Cheng, Katie M Wang, Tae-Kang Kim, Saowanee Jeayeng, Andrzej T Slominski. CYP27A1 acts on the pre-vitamin D3 photoproduct, lumisterol, producing biologically active hydroxy-metabolites. The Journal of steroid biochemistry and molecular biology. 2018 07; 181(?):1-10. doi: 10.1016/j.jsbmb.2018.02.008. [PMID: 29452159]
  • Julia Wranicz, Dorota Szostak-Węgierek. Health outcomes of vitamin D. Part I. characteristics and classic role. Roczniki Panstwowego Zakladu Higieny. 2014; 65(3):179-84. doi: . [PMID: 25247796]
  • Tetiana Orlova, Johan Moan, Zoya Lagunova, Lage Aksnes, Irina Terenetskaya, Asta Juzeniene. Increase in serum 25-hydroxyvitamin-D3 in humans after sunbed exposures compared to previtamin D3 synthesis in vitro. Journal of photochemistry and photobiology. B, Biology. 2013 May; 122(?):32-6. doi: 10.1016/j.jphotobiol.2013.03.006. [PMID: 23591142]
  • Gordon L Klein, Tai C Chen, Michael F Holick, Craig B Langman, Heather Price, Mario M Celis, David N Herndon. Synthesis of vitamin D in skin after burns. Lancet (London, England). 2004 Jan; 363(9405):291-2. doi: 10.1016/s0140-6736(03)15388-3. [PMID: 14751703]
  • L Y Matsuoka, L Ide, J Wortsman, J A MacLaughlin, M F Holick. Sunscreens suppress cutaneous vitamin D3 synthesis. The Journal of clinical endocrinology and metabolism. 1987 Jun; 64(6):1165-8. doi: 10.1210/jcem-64-6-1165. [PMID: 3033008]
  • M F Holick. The cutaneous photosynthesis of previtamin D3: a unique photoendocrine system. The Journal of investigative dermatology. 1981 Jul; 77(1):51-8. doi: 10.1111/1523-1747.ep12479237. [PMID: 6265564]
  • B M Freeman, A C Manning. The response of the immature fowl to multiple injections of adrenocorticotrophic hormone. British poultry science. 1975 Mar; 16(2):121-9. doi: 10.1080/00071667508416170. [PMID: 166732]
  • S Husted, T Hjort. Sperm antibodies in serum and seminal plasma. International journal of fertility. 1975; 20(2):97-105. doi: NULL. [PMID: 3485]