Pyranopterin (BioDeep_00000006000)

 

Secondary id: BioDeep_00001869546


代谢物信息卡片


[(5aR,8R,9aR)-2-amino-4-oxo-6,7-bis(sulfanyl)-1,5,5a,8,9a, 10-hexahydropyrano[3,2-g]pteridin-8-yl]methyl dihydrogen phosphate

化学式: C10H14N5O6PS2 (395.0123)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(blood) 8.24%

分子结构信息

SMILES: C(C1C(=C(C2C(O1)NC3=C(N2)C(=O)NC(=N3)N)S)S)OP(=O)(O)O
InChI: InChI=1S/C10H14N5O6PS2/c11-10-14-7-4(8(16)15-10)12-3-6(24)5(23)2(21-9(3)13-7)1-20-22(17,18)19/h2-3,9,12,23-24H,1H2,(H2,17,18,19)(H4,11,13,14,15,16)



数据库引用编号

14 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(9)

BioCyc(0)

PlantCyc(0)

代谢反应

2 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(1)

WikiPathways(1)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 5 GPHN, MOCS3, NFS1, XDH, YBX1
Peripheral membrane protein 1 HSD17B6
Endoplasmic reticulum membrane 1 CANX
Mitochondrion membrane 1 CANX
Nucleus 4 MOCS1, NFS1, URM1, YBX1
cytosol 9 ACOX1, GPHN, MOCS1, MOCS2, MOCS3, NFS1, URM1, XDH, YBX1
dendrite 1 GPHN
mitochondrial membrane 1 CANX
centrosome 1 NFS1
nucleoplasm 3 MOCS2, NFS1, YBX1
Cell membrane 1 GPHN
Lipid-anchor 1 GPHN
Cytoplasmic side 1 GPHN
Cytoplasmic granule 1 YBX1
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 MT-CYB
Synapse 1 YBX1
mitochondrial inner membrane 1 MT-CYB
Cytoplasm, cytosol 2 GPHN, MOCS2
Presynapse 1 CANX
plasma membrane 3 GPHN, PRSS27, YBX1
Membrane 3 ACOX1, CANX, MT-CYB
extracellular exosome 2 CANX, YBX1
Lumenal side 1 HSD17B6
endoplasmic reticulum 3 CANX, HSD17B6, YBX1
extracellular space 3 TST, XCL1, XDH
mitochondrion 5 MOCS1, MT-CYB, NFS1, SUOX, TST
intracellular membrane-bounded organelle 2 HSD17B6, YBX1
Microsome membrane 1 HSD17B6
postsynaptic density 1 GPHN
Single-pass type I membrane protein 1 CANX
Secreted 1 YBX1
extracellular region 3 PRSS27, XCL1, YBX1
Single-pass membrane protein 1 CANX
Mitochondrion matrix 1 TST
mitochondrial matrix 3 NFS1, SUOX, TST
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 NFS1
nuclear membrane 1 CANX
dendritic spine 1 GPHN
Melanosome membrane 1 CANX
Cytoplasm, P-body 1 YBX1
P-body 1 YBX1
postsynaptic membrane 1 GPHN
Mitochondrion inner membrane 1 MT-CYB
Cytoplasm, cytoskeleton 1 GPHN
Peroxisome 2 ACOX1, XDH
sarcoplasmic reticulum 1 XDH
peroxisomal matrix 1 ACOX1
peroxisomal membrane 1 ACOX1
Mitochondrion intermembrane space 1 SUOX
mitochondrial intermembrane space 1 SUOX
nuclear speck 1 MOCS2
Postsynaptic cell membrane 1 GPHN
cytoskeleton 1 GPHN
mitochondria-associated endoplasmic reticulum membrane contact site 1 CANX
Cell projection, dendrite 1 GPHN
cytoplasmic stress granule 1 YBX1
synaptic membrane 1 GPHN
endoplasmic reticulum quality control compartment 1 CANX
endoplasmic reticulum lumen 1 CANX
Secreted, extracellular exosome 1 YBX1
postsynaptic specialization 1 GPHN
iron-sulfur cluster assembly complex 1 NFS1
mitochondrial 1 NFS1
respiratory chain complex III 1 MT-CYB
ribonucleoprotein complex 1 YBX1
lumenal side of endoplasmic reticulum membrane 1 CANX
postsynaptic specialization membrane 1 GPHN
U12-type spliceosomal complex 1 YBX1
CRD-mediated mRNA stability complex 1 YBX1
histone pre-mRNA 3'end processing complex 1 YBX1
molybdopterin synthase complex 1 MOCS2
[Isoform Mitochondrial]: Mitochondrion 1 NFS1
[Isoform Cytoplasmic]: Cytoplasm 1 NFS1


文献列表

  • Simon Julius Mayr, Jörn Oliver Sass, Julia Vry, Janbernd Kirschner, Irina Mader, Jan-Bernd Hövener, Jochen Reiss, José Angel Santamaria-Araujo, Günter Schwarz, Sarah Catharina Grünert. A mild case of molybdenum cofactor deficiency defines an alternative route of MOCS1 protein maturation. Journal of inherited metabolic disease. 2018 03; 41(2):187-196. doi: 10.1007/s10545-018-0138-7. [PMID: 29368224]
  • Joanna Jakubiczka-Smorag, Jose Angel Santamaria-Araujo, Imke Metz, Avadh Kumar, Samy Hakroush, Wolfgang Brueck, Guenter Schwarz, Peter Burfeind, Jochen Reiss, Lukasz Smorag. Mouse model for molybdenum cofactor deficiency type B recapitulates the phenotype observed in molybdenum cofactor deficient patients. Human genetics. 2016 07; 135(7):813-26. doi: 10.1007/s00439-016-1676-4. [PMID: 27138983]
  • Philippa B Mills, Emma J Footitt, Serkan Ceyhan, Paula J Waters, Cornelis Jakobs, Peter T Clayton, Eduard A Struys. Urinary AASA excretion is elevated in patients with molybdenum cofactor deficiency and isolated sulphite oxidase deficiency. Journal of inherited metabolic disease. 2012 Nov; 35(6):1031-6. doi: 10.1007/s10545-012-9466-1. [PMID: 22403017]
  • L H Ngu, B Afroze, B C Chen, O Affandi, M Y Zabedah. Molybdenum cofactor deficiency in a Malaysian child. Singapore medical journal. 2009 Oct; 50(10):e365-7. doi: . [PMID: 19907877]
  • M Arenas, L D Fairbanks, K Vijayakumar, L Carr, E Escuredo, A M Marinaki. An unusual genetic variant in the MOCS1 gene leads to complete missplicing of an alternatively spliced exon in a patient with molybdenum cofactor deficiency. Journal of inherited metabolic disease. 2009 Aug; 32(4):560-9. doi: 10.1007/s10545-009-1151-7. [PMID: 19544009]
  • Birthe Smolinsky, Sabrina A Eichler, Sabine Buchmeier, Jochen C Meier, Guenter Schwarz. Splice-specific functions of gephyrin in molybdenum cofactor biosynthesis. The Journal of biological chemistry. 2008 Jun; 283(25):17370-9. doi: 10.1074/jbc.m800985200. [PMID: 18411266]
  • Hava Peretz, Meirav Shtauber Naamati, David Levartovsky, Ayala Lagziel, Esther Shani, Ivona Horn, Hanna Shalev, Daniel Landau. Identification and characterization of the first mutation (Arg776Cys) in the C-terminal domain of the Human Molybdenum Cofactor Sulfurase (HMCS) associated with type II classical xanthinuria. Molecular genetics and metabolism. 2007 May; 91(1):23-9. doi: 10.1016/j.ymgme.2007.02.005. [PMID: 17368066]
  • K Ichida, H Ibrahim Aydin, M Hosoyamada, H Serap Kalkanoglu, A Dursun, I Ohno, T Coskun, A Tokatli, T Shibasaki, T Hosoya. A Turkish case with molybdenum cofactor deficiency. Nucleosides, nucleotides & nucleic acids. 2006; 25(9-11):1087-91. doi: 10.1080/15257770600894022. [PMID: 17065069]
  • A Macaya, L Brunso, N Fernández-Castillo, J A Arranz, H B Ginjaar, E Cuenca-León, R Corominas, M Roig, B Cormand. Molybdenum cofactor deficiency presenting as neonatal hyperekplexia: a clinical, biochemical and genetic study. Neuropediatrics. 2005 Dec; 36(6):389-94. doi: 10.1055/s-2005-872877. [PMID: 16429380]
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