S-Ribosylhomocysteine (BioDeep_00000005238)

 

Secondary id: BioDeep_00001870758

Chemicals and Drugs Endogenous natural product


代谢物信息卡片


S-(5-Deoxy-D-ribos-5-yl)-L-homocysteine

化学式: C9H17NO6S (267.0777)
中文名称: S-核糖基同型半胱氨酸
谱图信息: 最多检出来源 Homo sapiens(blood) 20.02%

Reviewed

Last reviewed on 2024-08-14.

Cite this Page

S-Ribosylhomocysteine. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/s-ribosylhomocysteine (retrieved 2024-12-23) (BioDeep RN: BioDeep_00000005238). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C(CSCC1C(C(C(O1)O)O)O)C(C(=O)O)N
InChI: InChI=1S/C9H17NO6S/c10-4(8(13)14)1-2-17-3-5-6(11)7(12)9(15)16-5/h4-7,9,11-12,15H,1-3,10H2,(H,13,14)/t4-,5+,6+,7+,9+/m0/s1

描述信息

S-(5-deoxy-beta-D-ribos-5-yl)-L-homocysteine is an S-(5-deoxy-D-ribos-5-yl)-L-homocysteine in which the anomeric centre has beta-configuration. It has a role as an Escherichia coli metabolite. It is functionally related to a L-homocysteine.

同义名列表

6 个代谢物同义名

S-Ribosylhomocysteine; S-(5-Deoxy-D-ribos-5-yl)-L-homocysteine; S-D-Ribosyl-L-homocysteine; S-Ribosyl-L-homocysteine; Ribose-5-S-homocysteine; SCHEMBL12436335



数据库引用编号

15 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

14 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 AHCY, APRT, GLI3, IGF2BP2, MAP3K7, METTL3, MTAP, PKM, PNP, TUBB2B
Peripheral membrane protein 1 MAP3K7
Endosome membrane 2 MAP3K7, TAB3
Endoplasmic reticulum membrane 1 MAP3K7
Nucleus 9 AHCY, GLI3, IGF2BP2, IGFBP3, MAP3K7, METTL3, MTAP, PKM, TUBB2B
cytosol 11 AHCY, APRT, GLI3, IGF2BP2, LIPE, MAP3K7, METTL3, MTAP, PKM, PNP, TAB3
nuclear body 1 METTL3
nucleoplasm 4 APRT, GLI3, METTL3, MTAP
Cell membrane 2 LIPE, MAP3K7
Cytoplasmic side 1 MAP3K7
Golgi apparatus 1 METTL3
Cytoplasm, cytosol 1 LIPE
plasma membrane 2 MAP3K7, TAB3
Membrane 1 LIPE
caveola 1 LIPE
extracellular exosome 6 AHCY, APRT, MTAP, PKM, PNP, TAB3
endoplasmic reticulum 2 AHCY, TAB3
extracellular space 3 IGF2, IGFBP3, PNP
Schaffer collateral - CA1 synapse 1 TUBB2B
mitochondrion 1 PKM
intracellular membrane-bounded organelle 1 GLI3
Secreted 3 IGF2, IGFBP3, PNP
extracellular region 5 APRT, IGF2, IGFBP3, PKM, PNP
Extracellular vesicle 1 PKM
microtubule cytoskeleton 1 TUBB2B
nucleolus 1 GLI3
Cytoplasm, P-body 1 IGF2BP2
P-body 1 IGF2BP2
vesicle 1 PKM
Cytoplasm, cytoskeleton 1 TUBB2B
microtubule 1 TUBB2B
collagen-containing extracellular matrix 1 PKM
axoneme 1 GLI3
ciliary tip 1 GLI3
nuclear speck 2 GLI3, METTL3
ciliary base 1 GLI3
cilium 2 GLI3, PKM
mitotic spindle 1 TUBB2B
cytoskeleton 1 IGF2BP2
intercellular bridge 1 TUBB2B
Lipid droplet 1 LIPE
Membrane, caveola 1 LIPE
Melanosome 1 AHCY
Cytoplasm, Stress granule 1 IGF2BP2
cytoplasmic stress granule 1 IGF2BP2
Nucleus speckle 1 METTL3
ficolin-1-rich granule lumen 2 PKM, PNP
secretory granule lumen 3 APRT, PKM, PNP
endoplasmic reticulum lumen 1 IGFBP3
transcription repressor complex 1 GLI3
platelet alpha granule lumen 1 IGF2
ATAC complex 1 MAP3K7
Rough endoplasmic reticulum 1 PKM
oxidoreductase complex 1 METTL3
insulin-like growth factor binding protein complex 1 IGFBP3
insulin-like growth factor ternary complex 1 IGFBP3
GLI-SUFU complex 1 GLI3
[Isoform M2]: Cytoplasm 1 PKM
[Isoform M1]: Cytoplasm 1 PKM
RNA N6-methyladenosine methyltransferase complex 1 METTL3


文献列表