trans-2,3-Epoxysuccinate (BioDeep_00000005239)

 

Secondary id: BioDeep_00001869886


代谢物信息卡片


(+/-)-THIOPENTALSODIUMSALT/SODIUMCARBONATE

化学式: C4H4O5 (132.0059)
中文名称: (2R,3R)-(-)- 环氧琥珀酸, (±)-反-环氧琥珀酸
谱图信息: 最多检出来源 Homo sapiens(plant) 12.92%

分子结构信息

SMILES: C1(C(O1)C(=O)O)C(=O)O
InChI: InChI=1S/C4H4O5/c5-3(6)1-2(9-1)4(7)8/h1-2H,(H,5,6)(H,7,8)/t1-,2-/m1/s1



数据库引用编号

12 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 4 CA3, CAPN1, FH, SRR
Peripheral membrane protein 2 CTSB, CTSL
Nucleus 2 CTSL, FH
cytosol 5 CA3, CAPN1, FH, GPT, SRR
Cell membrane 1 CAPN1
Multi-pass membrane protein 1 MT-CYB
Golgi apparatus 1 CTSL
mitochondrial inner membrane 1 MT-CYB
neuronal cell body 1 SRR
Lysosome 3 CAPN1, CTSB, CTSL
plasma membrane 3 CAPN1, CTSL, IGHE
Membrane 2 CAPN1, MT-CYB
apical plasma membrane 2 CTSB, CTSL
extracellular exosome 5 CAPN1, CTSB, CTSL, FH, GPT
extracellular space 3 CTSB, CTSL, IGHE
lysosomal lumen 1 CTSL
perinuclear region of cytoplasm 1 CTSB
mitochondrion 3 CAPN1, FH, MT-CYB
intracellular membrane-bounded organelle 1 CTSL
Single-pass type I membrane protein 1 IGHE
Secreted 1 CTSL
extracellular region 4 CAPN1, CTSB, CTSL, IGHE
mitochondrial matrix 1 FH
Extracellular side 2 CTSB, CTSL
external side of plasma membrane 1 CTSB
multivesicular body 1 CTSL
apical part of cell 1 SRR
Apical cell membrane 2 CTSB, CTSL
Mitochondrion inner membrane 1 MT-CYB
focal adhesion 1 CAPN1
collagen-containing extracellular matrix 2 CTSB, CTSL
IgE immunoglobulin complex 1 IGHE
Chromosome 1 FH
Secreted, extracellular space 2 CTSB, CTSL
[Isoform 2]: Cell membrane 1 IGHE
site of double-strand break 1 FH
Cornified envelope 1 CAPN1
Melanosome 1 CTSB
ficolin-1-rich granule lumen 2 CAPN1, CTSB
respiratory chain complex III 1 MT-CYB
[Isoform 2]: Nucleus 1 CTSL
[Isoform 3]: Cell membrane 1 IGHE
endocytic vesicle lumen 1 CTSL
peptidase inhibitor complex 1 CTSB
[Isoform 1]: Secreted 1 IGHE
IgE B cell receptor complex 1 IGHE
immunoglobulin complex, circulating 1 IGHE
calpain complex 1 CAPN1
Cytoplasmic vesicle, secretory vesicle, chromaffin granule 1 CTSL
chromaffin granule 1 CTSL
endolysosome lumen 2 CTSB, CTSL
[Isoform Mitochondrial]: Mitochondrion 1 FH
[Isoform Cytoplasmic]: Cytoplasm, cytosol 1 FH


文献列表

  • Li-Hua Zhang, Zhi-Liang Zhu, Hua Zhang, Yan-Ling Qiu, Jian-Fu Zhao. [Extraction of Pb from sewage sludge with PESA]. Huan jing ke xue= Huanjing kexue. 2008 Jan; 29(1):158-63. doi: ". [PMID: 18441934]
  • Karen Ellis James, Marion G Götz, Conor R Caffrey, Elizabeth Hansell, Wendy Carter, Alan J Barrett, James H McKerrow, James C Powers. Aza-peptide epoxides: potent and selective inhibitors of Schistosoma mansoni and pig kidney legumains (asparaginyl endopeptidases). Biological chemistry. 2003 Dec; 384(12):1613-8. doi: 10.1515/bc.2003.179. [PMID: 14719804]