Methyl β-D-galactopyranoside (BioDeep_00001868609)

Main id: BioDeep_00000003238

 

PANOMIX_OTCML-2023 BioNovoGene_Lab2019


代谢物信息卡片


Methyl beta-D-galactopyranoside

化学式: C7H14O6 (194.079)
中文名称: 甲基-β-D-吡喃半乳糖苷, 甲基β-D-吡喃半乳糖苷
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: COC1C(C(C(C(O1)CO)O)O)O
InChI: InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4+,5+,6-,7-/m1/s1

描述信息

Methyl β-D-Galactopyranoside is an endogenous metabolite.

同义名列表

4 个代谢物同义名

Methyl beta-D-galactopyranoside; Methyl β-D-galactopyranoside; Methyl beta-D-galactoside; Methyl beta-D-galactopyranoside



数据库引用编号

12 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 ALB, BCL2, CASP3, ITPR3, LGALS1, LGALS3, LGALS7, LGALS8, LGALS9, TLR4
Endosome membrane 1 TLR4
Endoplasmic reticulum membrane 3 BCL2, ITPR3, SFTPD
Nucleus 6 ALB, BCL2, CASP3, LGALS3, LGALS7, LGALS9
cytosol 8 ALB, BCL2, CASP3, LGALS1, LGALS3, LGALS4, LGALS8, LGALS9
centrosome 1 ALB
nucleoplasm 3 CASP3, ITPR3, LGALS3
Cell membrane 3 ITGAM, SLC2A5, TLR4
Multi-pass membrane protein 2 ITPR3, SLC2A5
cell surface 3 ITGAM, LGALS3, TLR4
glutamatergic synapse 1 CASP3
Golgi apparatus 1 ALB
mitochondrial inner membrane 1 LGALS3
neuronal cell body 2 CASP3, ITPR3
sarcolemma 1 SLC2A5
Cytoplasm, cytosol 1 LGALS8
Lysosome 1 SFTPD
plasma membrane 8 ITGAM, ITPR3, LCT, LGALS1, LGALS3, LGALS4, SLC2A5, TLR4
Membrane 6 BCL2, ITGAM, ITPR3, LGALS3, LGALS8, TLR4
apical plasma membrane 1 SLC2A5
brush border 1 ITPR3
extracellular exosome 7 ALB, ITGAM, LGALS1, LGALS3, LGALS7, MGP, SLC2A5
endoplasmic reticulum 3 ALB, BCL2, ITPR3
extracellular space 11 ALB, ITGAM, LGALS1, LGALS3, LGALS4, LGALS7, LGALS8, LGALS9, LPA, SFTPD, TG
perinuclear region of cytoplasm 1 TLR4
mitochondrion 1 BCL2
protein-containing complex 2 ALB, BCL2
postsynaptic density 1 CASP3
Single-pass type I membrane protein 3 ITGAM, LCT, TLR4
Secreted 6 ALB, LGALS1, LGALS3, LGALS7, LGALS9, TG
extracellular region 7 ALB, GALP, LGALS1, LGALS3, LPA, SFTPD, TG
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 1 BCL2
[Isoform 2]: Secreted 1 LGALS9
anchoring junction 1 ALB
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 2 ITGAM, TLR4
Secreted, extracellular space, extracellular matrix 1 LGALS1
multivesicular body 1 SFTPD
cytoplasmic vesicle 1 LGALS8
nucleolus 1 ITPR3
Early endosome 1 TLR4
apical part of cell 1 ITPR3
Apical cell membrane 2 LCT, SLC2A5
Cell membrane, sarcolemma 1 SLC2A5
Membrane raft 1 ITGAM
pore complex 1 BCL2
extracellular matrix 1 MGP
collagen trimer 1 SFTPD
sarcoplasmic reticulum 1 ITPR3
collagen-containing extracellular matrix 5 LGALS1, LGALS3, LGALS4, LGALS9, MGP
nuclear outer membrane 1 ITPR3
Cell projection, ruffle 1 TLR4
ruffle 1 TLR4
receptor complex 2 ITPR3, TLR4
ciliary basal body 1 ALB
phagocytic cup 1 TLR4
centriole 1 ALB
spindle pole 1 ALB
blood microparticle 1 ALB
spliceosomal complex 1 LGALS3
[Isoform 3]: Secreted 1 LGALS9
specific granule membrane 2 ITGAM, SLC2A5
tertiary granule membrane 1 ITGAM
myelin sheath 1 BCL2
lipopolysaccharide receptor complex 1 TLR4
plasma membrane raft 1 ITGAM
secretory granule membrane 2 ITPR3, LGALS3
endoplasmic reticulum lumen 2 ALB, LGALS1
platelet alpha granule lumen 1 ALB
endocytic vesicle 1 SFTPD
immunological synapse 1 LGALS3
clathrin-coated endocytic vesicle 1 SFTPD
platelet dense tubular network membrane 1 ITPR3
ficolin-1-rich granule membrane 1 LGALS3
external side of apical plasma membrane 1 LCT
death-inducing signaling complex 1 CASP3
Cytoplasmic vesicle, secretory vesicle membrane 1 ITPR3
integrin complex 1 ITGAM
transport vesicle membrane 1 ITPR3
integrin alphaM-beta2 complex 1 ITGAM
galectin complex 2 LGALS1, LGALS2
plasma lipoprotein particle 1 LPA
BAD-BCL-2 complex 1 BCL2
cytoplasmic side of endoplasmic reticulum membrane 1 ITPR3
ciliary transition fiber 1 ALB


文献列表

  • Noreen K Nkosana, Daniel J Czyzyk, Zarek S Siegel, Joy M Cote, Erika A Taylor. Synthesis, kinetics and inhibition of Escherichia coli Heptosyltransferase I by monosaccharide analogues of Lipid A. Bioorganic & medicinal chemistry letters. 2018 02; 28(4):594-600. doi: 10.1016/j.bmcl.2018.01.040. [PMID: 29398539]
  • Christina O'Rourke, Timothy Gregson, Lorna Murray, Ian H Sadler, Stephen C Fry. Sugar composition of the pectic polysaccharides of charophytes, the closest algal relatives of land-plants: presence of 3-O-methyl-D-galactose residues. Annals of botany. 2015 Aug; 116(2):225-36. doi: 10.1093/aob/mcv089. [PMID: 26113633]
  • Marta Jiménez, Sabine André, Caterina Barillari, Antonio Romero, Didier Rognan, Hans-Joachim Gabius, Dolores Solís. Domain versatility in plant AB-toxins: evidence for a local, pH-dependent rearrangement in the 2gamma lectin site of the mistletoe lectin by applying ligand derivatives and modelling. FEBS letters. 2008 Jun; 582(15):2309-12. doi: 10.1016/j.febslet.2008.05.035. [PMID: 18519041]
  • Peter Capek. An arabinogalactan containing 3-O-methyl-D-galactose residues isolated from the aerial parts of Salvia officinalis L. Carbohydrate research. 2008 Jun; 343(8):1390-3. doi: 10.1016/j.carres.2008.03.026. [PMID: 18433740]
  • Joel S Griffitts, Stuart M Haslam, Tinglu Yang, Stephan F Garczynski, Barbara Mulloy, Howard Morris, Paul S Cremer, Anne Dell, Michael J Adang, Raffi V Aroian. Glycolipids as receptors for Bacillus thuringiensis crystal toxin. Science (New York, N.Y.). 2005 Feb; 307(5711):922-5. doi: 10.1126/science.1104444. [PMID: 15705852]
  • M Mayer, B Meyer. Group epitope mapping by saturation transfer difference NMR to identify segments of a ligand in direct contact with a protein receptor. Journal of the American Chemical Society. 2001 Jun; 123(25):6108-17. doi: 10.1021/ja0100120. [PMID: 11414845]
  • H A Vaughan, B E Loveland, M S Sandrin. Gal alpha(1,3)Gal is the major xenoepitope expressed on pig endothelial cells recognized by naturally occurring cytotoxic human antibodies. Transplantation. 1994 Oct; 58(8):879-82. doi: 10.1097/00007890-199410270-00003. [PMID: 7524207]
  • K G Nickerson, J Liao, E A Kabat. A monoclonal IgM kappa from a blood group B individual with specificity for alpha-galactosyl epitopes on partially hydrolyzed blood group B substance. Carbohydrate research. 1993 May; 243(2):345-57. doi: 10.1016/0008-6215(93)87038-t. [PMID: 7688662]
  • S Kikuchi, A Ohinata, Y Tsumuraya, Y Hashimoto, Y Kaneko, H Matsushima. Production and characterization of antibodies to the beta-(1-->6)-galactotetraosyl group and their interaction with arabinogalactan-proteins. Planta. 1993; 190(4):525-35. doi: 10.1007/bf00224792. [PMID: 7763824]
  • H Takesada, N Shibuya, N Nagashima. The interaction of elderberry (Sambucus sieboldiana) bark lectin and sialyloligosaccharides as detected by 1H-NMR. Journal of biochemistry. 1992 Jul; 112(1):143-6. doi: 10.1093/oxfordjournals.jbchem.a123854. [PMID: 1429503]