N1-(alpha-D-ribosyl)-5,6-dimethyl-benzimidazole (BioDeep_00000005947)

 

Secondary id: BioDeep_00001869508

human metabolite Endogenous


代谢物信息卡片


(2S,5R)-2-(5,6-dimethyl-1H-1,3-benzodiazol-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol

化学式: C14H18N2O4 (278.1267)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(natural_products) 2.98%

分子结构信息

SMILES: CC1=CC2=C(C=C1C)N(C=N2)C3C(C(C(O3)CO)O)O
InChI: InChI=1S/C14H18N2O4/c1-7-3-9-10(4-8(7)2)16(6-15-9)14-13(19)12(18)11(5-17)20-14/h3-4,6,11-14,17-19H,5H2,1-2H3/t11-,12-,13-,14+/m1/s1

描述信息

N1-(alpha-D-ribosyl)-5,6-dimethyl-benzimidazole is an intermediate in riboflavin metabolism. It is converted from N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole via dephosphorylation by the enzyme phosphohistidine phosphatase 1 (EC 3.1.3.-). Humans do not have all the enzymes needed to synthesize or metabolize riboflavin. However, gut microflora do have the necessary enzymatic machinery to produce and metabolize this vitamin. Riboflavin (or vitamin B2) is an easily absorbed micronutrient with a key role in maintaining health in humans and animals. It is the central component of the cofactors FAD and FMN, and is therefore required by all flavoproteins. Riboflavin is yellow or yellow-orange in color and in addition to being used as a food coloring it is also used to fortify some foods including baby foods, breakfast cereals, pastas, sauces, processed cheese, fruit drinks, vitamin-enriched milk products, some energy drinks, and vitamin supplements. [HMDB]
N1-(alpha-D-ribosyl)-5,6-dimethyl-benzimidazole is an intermediate in riboflavin metabolism. It is converted from N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole via dephosphorylation by the enzyme phosphohistidine phosphatase 1 (EC 3.1.3.-). Humans do not have all the enzymes needed to synthesize or metabolize riboflavin. However, gut microflora do have the necessary enzymatic machinery to produce and metabolize this vitamin. Riboflavin (or vitamin B2) is an easily absorbed micronutrient with a key role in maintaining health in humans and animals. It is the central component of the cofactors FAD and FMN, and is therefore required by all flavoproteins. Riboflavin is yellow or yellow-orange in color and in addition to being used as a food coloring it is also used to fortify some foods including baby foods, breakfast cereals, pastas, sauces, processed cheese, fruit drinks, vitamin-enriched milk products, some energy drinks, and vitamin supplements.

同义名列表

14 个代谢物同义名

(2S,5R)-2-(5,6-dimethyl-1H-1,3-benzodiazol-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol; (2S,5R)-2-(5,6-dimethyl-1,3-benzodiazol-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol; (2S,5R)-2-(5,6 Dimethylbenzimidazol-1-yl)-5 (hydroxymethyl)oxolane-3,4-diol; 5,6-Dimethyl-1-alpha-delta-ribofuranosyl-1H-benzimidazole; N1-(alpha-delta-Ribosyl)-5,6-dimethylbenzimidazole; 5,6-Dimethyl-1-a-D-ribofuranosyl-1H-benzimidazole; N1-(alpha-D-ribosyl)-5,6-dimethyl-benzimidazole; N1-(alpha-D-Ribosyl)-5,6-dimethylbenzimidazole; N1-(Α-D-ribosyl)-5,6-dimethyl-benzimidazole; N1-(a-D-Ribosyl)-5,6-dimethyl-benzimidazole; .alpha.-Ribazole; alpha-Ribazole; a-Ribazole; alpha-Ribazole



数据库引用编号

15 个数据库交叉引用编号

分类词条

相关代谢途径

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代谢反应

17 个相关的代谢反应过程信息。

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BioCyc(17)

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2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

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文献列表

  • D S Froese, S Healy, M McDonald, G Kochan, U Oppermann, F H Niesen, R A Gravel. Thermolability of mutant MMACHC protein in the vitamin B12-responsive cblC disorder. Molecular genetics and metabolism. 2010 May; 100(1):29-36. doi: 10.1016/j.ymgme.2010.02.005. [PMID: 20219402]
  • C D Scher, G J Todaro. Selective growth of human neoplastic cells in medium lacking serum growth factor. Experimental cell research. 1971 Oct; 68(2):479-81. doi: 10.1016/0014-4827(71)90181-9. [PMID: 5288227]