LysoPA(16:0/0:0) (BioDeep_00000005382)

 

Secondary id: BioDeep_00000633494, BioDeep_00001869036

human metabolite Endogenous LipidSearch


代谢物信息卡片


1-Palmitoyl-lysophosphatidic acid, sodium salt, (R)-isomer

化学式: C19H39O7P (410.2433)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(plant) 12.36%

分子结构信息

SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)O)O
InChI: InChI=1S/C19H39O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-19(21)25-16-18(20)17-26-27(22,23)24/h18,20H,2-17H2,1H3,(H2,22,23,24)

描述信息

LysoPA(16:0/0:0) is a lysophosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. Lysophosphatidic acids can have different combinations of fatty acids of varying lengths and saturation attached at the C-1 (sn-1) or C-2 (sn-2) position. Fatty acids containing 16 and 18 carbons are the most common. Lysophosphatidic acid is the simplest possible glycerophospholipid. It is the biosynthetic precursor of phosphatidic acid. Although it is present at very low levels only in animal tissues, it is extremely important biologically, influencing many biochemical processes. In particular, lysophosphatidic acid is an intercellular lipid mediator with growth factor-like activities, and is rapidly produced and released from activated platelets to influence target cells. 1-Palmitoyl lysophosphatidic acid is the major component of lysophosphatidic acid (LPA) in plasma, and is in a reduced ratio in individuals with gynecological cancers (PMID 11585410). LPA is a pluripotent lipid mediator controlling growth, motility, and differentiation, that has a strong influence on the chemotaxis and ultrastructure of human neutrophils (PMID 7416233). In serum and plasma, LPA is mainly converted from lysophospholipids, whereas in platelets and some cancer cells it is converted from phosphatidic acid. In each pathway, at least two phospholipase activities are required: phospholipase A1 (PLA1)/PLA2 plus lysophospholipase D (lysoPLD) activities are involved in the first pathway and phospholipase D (PLD) plus PLA1/PLA2 activities are involved in the second pathway. (PMID 15271293).
Lysopa(16:0/0:0), also known as 1-palmitoyl lysophosphatidic acid or 1-hexadecanoyl-sn-glycero-3-phosphate, is a member of the class of compounds known as 1-acylglycerol-3-phosphates. 1-acylglycerol-3-phosphates are lysophosphatidic acids where the glycerol is esterified with a fatty acid at O-1 position. Thus, lysopa(16:0/0:0) is considered to be a glycerophosphate lipid molecule. Lysopa(16:0/0:0) is practically insoluble (in water) and a moderately acidic compound (based on its pKa). Lysopa(16:0/0:0) can be found in a number of food items such as alfalfa, soy bean, banana, and barley, which makes lysopa(16:0/0:0) a potential biomarker for the consumption of these food products. Lysopa(16:0/0:0) can be found primarily throughout all human tissues. Lysopa(16:0/0:0) exists in all living species, ranging from bacteria to humans. In humans, lysopa(16:0/0:0) is involved in several metabolic pathways, some of which include cardiolipin biosynthesis CL(16:0/18:1(11Z)/18:0/18:1(9Z)), cardiolipin biosynthesis CL(16:0/16:1(9Z)/16:1(9Z)/16:0), cardiolipin biosynthesis CL(16:0/20:4(5Z,8Z,11Z,14Z)/18:0/20:4(5Z,8Z,11Z,14Z)), and cardiolipin biosynthesis CL(16:0/18:1(11Z)/18:0/18:1(11Z)). Lysopa(16:0/0:0) is also involved in several metabolic disorders, some of which include de novo triacylglycerol biosynthesis TG(16:0/24:0/20:4(8Z,11Z,14Z,17Z)), de novo triacylglycerol biosynthesis TG(16:0/22:2(13Z,16Z)/22:0), de novo triacylglycerol biosynthesis TG(16:0/15:0/18:3(9Z,12Z,15Z)), and de novo triacylglycerol biosynthesis TG(16:0/15:0/24:0).

同义名列表

21 个代谢物同义名

1-Palmitoyl-lysophosphatidic acid, sodium salt, (R)-isomer; [3-(hexadecanoyloxy)-2-hydroxypropoxy]phosphonic acid; 1-Palmitoyl-lysophosphatidic acid, (R)-isomer; 1-palmitoyl-2-hydroxy-sn-glycero-3-phosphate; 1-Hexadecanoyl-sn-glycero-3-phosphoric acid; 1-hexadecanoyl-sn-glycero-3-phosphate; 1-Palmitoylglycerol 3-phosphoric acid; 1-Palmitoyl-rac-glycerol 3-phosphate; 1-Palmitoyl-sn-glycerol 3-phosphate; 1-Hexadecanoyl-glycero-3-phosphate; 1-Palmitoyl-lysophosphatidic acid; 1-Palmitoyl Lysophosphatidic Acid; 1-Hexadecanoyl-phosphatidic acid; 1-Palmitoyl-glycero-3-phosphate; Lysophosphatidic acid(16:0/0:0); 1-Palmitoylglycerol 3-phosphate; Lysophosphatidic acid(16:0); LysoPA(16:0/0:0); LPA(16:0/0:0); LPA(16:0); PLPA



数据库引用编号

17 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 7 LPAR1, LPAR3, MERTK, PIK3CA, PLA2G12A, PVR, RBFOX3
Nucleus 2 CD274, RBFOX3
cytosol 3 CD163, NCAM1, PIK3CA
nuclear body 1 LPAR4
nucleoplasm 1 CD274
Cell membrane 6 CD163, CD274, LPAR1, LPAR5, MERTK, NCAM1
lamellipodium 1 PIK3CA
Early endosome membrane 1 CD274
Multi-pass membrane protein 2 LPAR1, LPAR5
Synapse 1 LPAR3
cell surface 3 LPAR1, NCAM1, PVR
dendritic shaft 1 LPAR1
glutamatergic synapse 1 LPAR1
Golgi apparatus 1 NPY
Golgi membrane 1 NCAM1
neuronal cell body 1 LPAR1
presynaptic membrane 1 LPAR1
endosome 1 LPAR1
plasma membrane 11 CD163, CD274, ENPP2, LPAR1, LPAR3, LPAR4, LPAR5, MERTK, NCAM1, PIK3CA, PVR
Membrane 6 CD163, ENPP2, LPAR5, MERTK, NCAM1, PVR
axon 1 LPAR3
extracellular exosome 2 BPIFB2, CD274
extracellular space 4 ENPP2, MERTK, NPY, PVR
perinuclear region of cytoplasm 1 PIK3CA
adherens junction 1 PVR
intercalated disc 1 PIK3CA
intracellular membrane-bounded organelle 1 LPAR4
Single-pass type I membrane protein 4 CD163, CD274, MERTK, NCAM1
Secreted 4 BPIFB2, ENPP2, NPY, PLA2G12A
extracellular region 6 BPIFB2, CD163, ENPP2, NCAM1, NPY, PLA2G12A
Single-pass membrane protein 1 PVR
photoreceptor outer segment 1 MERTK
external side of plasma membrane 3 CD163, CD274, NCAM1
actin cytoskeleton 1 CD274
dendritic spine 1 LPAR1
perikaryon 1 RBFOX3
postsynaptic membrane 1 LPAR1
focal adhesion 1 PVR
GABA-ergic synapse 2 LPAR1, NPY
collagen-containing extracellular matrix 1 NCAM1
receptor complex 1 MERTK
Lipid-anchor, GPI-anchor 1 NCAM1
Recycling endosome membrane 1 CD274
endoplasmic reticulum lumen 1 BPIFB2
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
endocytic vesicle membrane 1 CD163
neuronal dense core vesicle 1 NPY
[Isoform 1]: Cell membrane 1 CD274
[Isoform 4]: Secreted 1 CD274
Cytoplasmic vesicle, secretory vesicle, neuronal dense core vesicle 1 NPY
[Isoform 4]: Cell membrane 1 NCAM1
[Isoform 6]: Secreted 1 NCAM1
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA
[Soluble CD163]: Secreted 1 CD163
[Isoform 2]: Endomembrane system 1 CD274


文献列表

  • Shohei Kuwata, Kei Ohkubo, Shun Kumamoto, Naoto Yamaguchi, Naoki Izuka, Kaeko Murota, Toshifumi Tsujiuchi, Masao Iwamori, Nobuyuki Fukushima. Extracellular lipid metabolism influences the survival of ovarian cancer cells. Biochemical and biophysical research communications. 2013 Sep; 439(2):280-4. doi: 10.1016/j.bbrc.2013.08.041. [PMID: 23973712]
  • S Petrou, R W Ordway, J A Hamilton, J V Walsh, J J Singer. Structural requirements for charged lipid molecules to directly increase or suppress K+ channel activity in smooth muscle cells. Effects of fatty acids, lysophosphatidate, acyl coenzyme A and sphingosine. The Journal of general physiology. 1994 Mar; 103(3):471-86. doi: 10.1085/jgp.103.3.471. [PMID: 8195783]
  • R Brasseur, B de Kruijff, J M Ruysschaert. Mode of organization of lipid aggregates: a conformational analysis. Bioscience reports. 1984 Mar; 4(3):259-67. doi: 10.1007/bf01119662. [PMID: 6547066]