5-hydroxypentanoyl-CoA (BioDeep_00000630260)

 

Secondary id: BioDeep_00000005149, BioDeep_00000005509, BioDeep_00000006028, BioDeep_00001868877, BioDeep_00001869639


代谢物信息卡片


S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-hydroxyphosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethyl] 5-hydroxypentanethioate

化学式: C26H44N7O18P3S (867.1676)
中文名称: 5-羟基戊酰辅酶A
谱图信息: 最多检出来源 Mus musculus(otcml) 3.86%

Reviewed

Last reviewed on 2024-07-12.

Cite this Page

5-hydroxypentanoyl-CoA. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/5-hydroxypentanoyl-coa (retrieved 2024-12-18) (BioDeep RN: BioDeep_00000630260). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: CC(C(C)O)C(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)N2C=NC3=C(N=CN=C32)N)O)OP(=O)(O)O)O
InChI: InChI=1S/C26H44N7O18P3S/c1-25(2,20(37)23(38)29-6-5-15(34)28-7-8-55-16(35)9-26(3,4)39)11-48-54(45,46)51-53(43,44)47-10-14-19(50-52(40,41)42)18(36)24(49-14)33-13-32-17-21(27)30-12-31-22(17)33/h12-14,18-20,24,36-37,39H,5-11H2,1-4H3,(H,28,34)(H,29,38)(H,43,44)(H,45,46)(H2,27,30,31)(H2,40,41,42)/t14-,18-,19-,20+,24-/m1/s1

描述信息

5-hydroxypentanoyl-CoA is an acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxylic acid group of 5-hydroxypentanoic acid. It is functionally related to a pentanoyl-CoA and a 5-hydroxypentanoic acid. It is a conjugate acid of a 5-hydroxypentanoyl-CoA(4-).

5-Hydroxypentanoyl-coenzyme A is a thioester compound that plays a crucial role in various metabolic pathways, particularly in the biosynthesis of certain natural products and in the metabolism of fatty acids. It is formed by the condensation of 5-hydroxypentanoic acid with coenzyme A (CoA), which is a carrier molecule involved in the transfer of acyl groups.
Chemically, 5-hydroxypentanoyl-CoA consists of a 5-hydroxypentanoyl group, which is a five-carbon acyl chain with a hydroxyl group attached to the fifth carbon, and the CoA moiety. The CoA part of the molecule includes a pantothenic acid (vitamin B5) derivative, a pyrophosphate group, and an adenine nucleotide. The acyl group is attached to the thiol (-SH) group of the CoA via a thioester linkage, which is a high-energy bond.
In biological systems, 5-hydroxypentanoyl-CoA is an intermediate in the biosynthesis of polyketides, a large class of natural products that include many pharmaceuticals and other bioactive compounds. It can also be involved in the metabolism of fatty acids, where it may be converted into other compounds or used as a substrate for energy production.
The presence of the hydroxyl group in the acyl chain of 5-hydroxypentanoyl-CoA confers specific chemical properties and reactivity to the molecule, making it a versatile building block in various biochemical pathways. Its role in these pathways highlights the importance of understanding its synthesis, metabolism, and regulation in biological systems.

同义名列表

10 个代谢物同义名

5-hydroxypentanoyl-coenzyme A;5-hydroxyvaleryl-CoA;5-hydroxyvaleryl-coenzyme A;delta-hydroxypentanoyl-CoA;delta-hydroxypentanoyl-coenzyme A;delta-hydroxyvaleryl-CoA;delta-hydroxyvaleryl-coenzyme A;omega-hydroxypentanoyl-CoA;omega-hydroxypentanoylcoenzyme A;omega-hydroxyvaleryl-CoA;omega-hydroxyvaleryl-coenzyme A; 3-phosphoadenosine 5-{3-[(3R)-3-hydroxy-4-{[3-({2-[(5-hydroxypentanoyl)sulfanyl]ethyl}amino)-3-oxopropyl]amino}-2,2-dimethyl-4-oxobutyl] dihydrogen diphosphate}; 5-hydroxypentanoyl-CoA; CoA 5:0;O; 3-hydroxy-3-methylbutanoyl-CoA;3-hydroxy-3-methylbutanoyl-coenzyme A;3-hydroxy-3-methylbutyryl-CoA;3-hydroxy-3-methylbutyryl-coenzyme A;beta-hydroxyisovaleryl-CoA;beta-hydroxyisovaleryl-coenzyme-A; 3-hydroxy-3-methyl-butanoyl-CoA; 3-hydroxyisovaleryl-CoA; (2S,3S)-3-hydroxy-2-methylbutanoyl-coenzyme A;(S,S)-3-hydroxy-2-methylbutanoyl-coenzyme A;(S,S)-3-hydroxy-2-methylbutyryl-coenzyme A; (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA; 3S-hydroxy-2S-methylbutanoyl-CoA



数据库引用编号

14 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(3)

BioCyc(1)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。



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