5-Phosphoribosylamine (BioDeep_00000005094)

 

Secondary id: BioDeep_00001869387

human metabolite Endogenous


代谢物信息卡片


{[(2R,3S,4R,5R)-5-amino-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid

化学式: C5H12NO7P (229.0351)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(blood) 8.73%

分子结构信息

SMILES: C(C1C(C(C(O1)N)O)O)OP(=O)(O)O
InChI: InChI=1S/C5H12NO7P/c6-5-4(8)3(7)2(13-5)1-12-14(9,10)11/h2-5,7-8H,1,6H2,(H2,9,10,11)

描述信息

5-Phosphoribosylamine is a substrate for Amidophosphoribosyltransferase and Trifunctional purine biosynthetic protein adenosine-3. [HMDB]
5-Phosphoribosylamine is a substrate for Amidophosphoribosyltransferase and Trifunctional purine biosynthetic protein adenosine-3.
COVID info from COVID-19 Disease Map
Corona-virus
Coronavirus
SARS-CoV-2
COVID-19
SARS-CoV
COVID19
SARS2
SARS

同义名列表

15 个代谢物同义名

{[(2R,3S,4R,5R)-5-amino-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid; 5-Phospho-β-D-ribosylamine; 5-Phospho-beta-D-ribosyl-amine; 5-Phospho-beta-D-ribosylamine; beta-Phosphoribosyl-1-amine; 5-Phospho-β-D-ribosylamine; 5-Phospho-b-D-ribosylamine; β-Phosphoribosyl-1-amine; 5-P-beta-D-Ribosyl-amine; 5-Phospho-D-ribosylamine; 5-Phosphoribosyl-1-amine; Phosphoribosyl-1-amine; 5-Phosphoribosylamine; Phosphoribosylamine; PRA



数据库引用编号

18 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(3)

PlantCyc(0)

代谢反应

83 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(5)

WikiPathways(1)

Plant Reactome(0)

INOH(1)

PlantCyc(0)

COVID-19 Disease Map(1)

PathBank(74)

PharmGKB(1)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 4 CD36, EMP2, HPRT1, RIDA
Nucleus 4 EMP2, OMP, RIDA, THRA
cytosol 10 ASNS, CYS1, GART, GLS, GSS, HPRT1, OMP, PPAT, RIDA, THRA
phagocytic vesicle 1 CD36
nucleoplasm 1 THRA
RNA polymerase II transcription regulator complex 1 THRA
Cell membrane 2 CD36, EMP2
Lipid-anchor 1 CYS1
Multi-pass membrane protein 2 CD36, EMP2
Golgi apparatus membrane 1 EMP2
Synapse 2 GLS, OMP
cell surface 2 CD36, EMP2
Golgi apparatus 2 CD36, EMP2
Golgi membrane 1 EMP2
neuronal cell body 1 OMP
Cytoplasm, cytosol 1 GLS
plasma membrane 2 CD36, EMP2
Membrane 2 CD36, EMP2
apical plasma membrane 2 CD36, EMP2
axon 1 OMP
caveola 1 CD36
extracellular exosome 4 GART, GSS, HPRT1, RIDA
extracellular space 1 CD36
perinuclear region of cytoplasm 1 EMP2
mitochondrion 2 GLS, RIDA
Secreted 1 PRB1
extracellular region 1 PRB1
mitochondrial matrix 2 GLS, RIDA
ciliary membrane 1 CYS1
external side of plasma membrane 1 CD36
cytoplasmic vesicle 1 EMP2
apical part of cell 1 EMP2
Apical cell membrane 2 CD36, EMP2
Cytoplasm, perinuclear region 1 EMP2
Membrane raft 2 CD36, EMP2
Peroxisome 1 RIDA
collagen trimer 1 CD36
receptor complex 1 CD36
cilium 1 CYS1
chromatin 1 THRA
cell periphery 1 CD36
cytoskeleton 1 CYS1
[Isoform 1]: Mitochondrion 1 GLS
brush border membrane 1 CD36
Cytoplasm, cytoskeleton, cilium axoneme 1 CYS1
specific granule membrane 1 CD36
endocytic vesicle membrane 1 CD36
[Isoform 3]: Mitochondrion 1 GLS
Cell projection, cilium membrane 1 CYS1
platelet alpha granule membrane 1 CD36
[Glutaminase kidney isoform, mitochondrial 68 kDa chain]: Mitochondrion matrix 1 GLS
[Glutaminase kidney isoform, mitochondrial 65 kDa chain]: Mitochondrion matrix 1 GLS
[Isoform Alpha-2]: Cytoplasm 1 THRA


文献列表

  • Pawel Durek, Dirk Walther. The integrated analysis of metabolic and protein interaction networks reveals novel molecular organizing principles. BMC systems biology. 2008 Nov; 2(?):100. doi: 10.1186/1752-0509-2-100. [PMID: 19032748]
  • A Puigvert, D Ruano. [Etiopathogenesis of so-called congenital hydronephrosis]. Journal d'urologie et de nephrologie. 1979 Jan; 85(1-2):1-12. doi: NULL. [PMID: 439196]
  • M Yamada, J Takahashi. Effect of dietary DL-ethionine on postnatal growth, and activities of liver and kidney enzymes of male chickens, Gallus domesticus. Comparative biochemistry and physiology. C: Comparative pharmacology. 1977; 58(2C):177-81. doi: 10.1016/0306-4492(77)90101-0. [PMID: 23931]
  • M Sano. Subcellular localizations of guanylate cyclase and 3',5'-cyclic nucleotide phosphodiesterase in sea urchin sperm. Biochimica et biophysica acta. 1976 Apr; 428(2):525-31. doi: 10.1016/0304-4165(76)90061-1. [PMID: 6049]