Valienone (BioDeep_00000011831)

   

natural product


代谢物信息卡片


(4R,5S,6R)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-one

  化学式: C7H10O5 (174.0528)
中文名称: 井岗酮
  谱图信息: 最多检出来源 Homo sapiens(plant) 4.13%

Reviewed

Last reviewed on 2025-04-07.

Cite this Page

Valienone. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/valienone (retrieved 2026-01-07) (BioDeep RN: BioDeep_00000011831). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C1=C(C(C(C(C1=O)O)O)O)CO
InChI: InChI=1S/C7H10O5/c8-2-3-1-4(9)6(11)7(12)5(3)10/h1,5-8,10-12H,2H2/t5-,6+,7+/m1/s1

描述信息

A member of the class of cyclohexenones that is cyclohex-2-en-1-one substituted by hydroxy groups at positions 4, 5 and 6, and by a hydroxymethyl group at position 3 (the 4R,5S,6R-diastereomer).

Valienone is a member of the class of cyclohexenones that is cyclohex-2-en-1-one substituted by hydroxy groups at positions 4, 5 and 6, and by a hydroxymethyl group at position 3 (the 4R,5S,6R-diastereomer). It has a role as a bacterial xenobiotic metabolite. It is a member of cyclohexenones, an enone and a tetrol. It is functionally related to a valiolone.

Valienone is a biologically significant compound with the following key biological functions:

### 1. **Biosynthetic Precursor in Drug Synthesis**
Valienone serves as a **critical intermediate** in the biosynthesis of β-valienamine and valienamine. These derivatives are potent **β-glycosidase inhibitors**, which are essential for:
• **Treating lysosomal storage diseases**: β-valienamine derivatives (e.g., N-octyl-β-valienamine) specifically target β-glycosidase dysfunction, a hallmark of lysosomal storage disorders.
• **Diabetes management**: Valienamine is the active component of acarbose, a drug used to control blood glucose levels by inhibiting carbohydrate-digesting enzymes.

### 2. **Enzymatic Substrate in Stereoselective Reactions**
Valienone is a substrate for **aminotransferases** (e.g., BtrR from *Bacillus circulans*), which catalyze its conversion to β-valienamine with high stereoselectivity. This reaction involves:
• **Pyridoxal phosphate (PLP)-dependent transamination**: Ensures optical purity of the product (enantiomeric excess value).
• **Regulation of enzyme stability and activity**: Molecular dynamics simulations show that β-valienamine enhances the stability of BtrR and optimizes its catalytic tunnel for efficient product release.

### 3. **Role in Microbial Metabolism**
Valienone is naturally produced by microbial strains (e.g., *Streptomyces* spp.) as part of the **biosynthetic pathway for aminoglycoside antibiotics** like validamycin A. Its microbial production avoids the challenges of chemical synthesis, such as poor stereospecificity and complex reaction steps.

### 4. **Structural Basis for Drug Design**
The **hexacyclic polyol-ketone structure** of valienone provides a scaffold for developing:
• **Chiral therapeutics**: Its four stereocenters enable precise interactions with biological targets.
• **Enzyme inhibitors**: Modifications to its core structure enhance binding to glycosidases or other enzymes involved in metabolic diseases.

### References
: Exploration of Catalytic Selectivity for Aminotransferase (BtrR) Based on Molecular Dynamics (PMC, 2025)
: Efficient Synthesis of Valienamine via Directed Evolution of Aminotransferases (*ACS Catal.*, 2022)

同义名列表

2 个代谢物同义名

Valienone; SCHEMBL14409034



数据库引用编号

6 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome()

BioCyc(1)

PlantCyc()

代谢反应

4 个相关的代谢反应过程信息。

Reactome()

BioCyc(1)

WikiPathways()

Plant Reactome()

INOH()

PlantCyc()

COVID-19 Disease Map()

PathBank()

PharmGKB()

7 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。



文献列表



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