Gene Association: SERINC1

UniProt Search: SERINC1 (PROTEIN_CODING)
Function Description: serine incorporator 1

found 11 associated metabolites with current gene based on the text mining result from the pubmed database.

D-Alanyl-D-alanine

(2R)-2-[(2R)-2-aminopropanamido]propanoic acid

C6H12N2O3 (160.0848)


The ATP-dependent carboxylate-amine/thiol ligase superfamily is known to contain enzymes catalyzing the formation of various types of peptide, one of which is d-alanyl-d-alanine.(PMID: 16030213). The glycopeptide antibiotic vancomycin acts by binding to the D-alanyl-D-alanine terminus of the cell wall precursor lipid II in the cytoplasmic membrane.(PMID: 17418637). D-alanine-D-alanine ligase from Thermotoga maritima ATCC 43589 (TmDdl) was a useful biocatalyst for synthesizing D-amino acid dipeptides.D-Alanine-D-alanine ligase (Ddl) catalyzes the biosynthesis of an essential bacterial peptidoglycan precursor D-alanyl-D-alanine and it represents an important target for development of new antibacterial drugs. (PMID: 17267218). D-Alanyl-D-alanine is a microbial metabolite. Alanyl-alanine, also known as ala-ala or A-a dipeptide, is a member of the class of compounds known as dipeptides. Dipeptides are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond. Alanyl-alanine is soluble (in water) and a weakly acidic compound (based on its pKa). Alanyl-alanine can be found in chives, which makes alanyl-alanine a potential biomarker for the consumption of this food product. Alanyl-alanine can be found primarily in feces. Alanyl-alanine exists in all living organisms, ranging from bacteria to humans. Acquisition and generation of the data is financially supported in part by CREST/JST. D-Ala-D-Ala constitutes the terminus of the peptide part of the peptidoglycan monomer unit and is involved in the transpeptidation reaction as the substrate. D-Ala-D-Ala is catalyzed by D-Alanine-D-Alanine ligase. D-Ala-D-Ala is a bacterial endogenous metabolite[1][2].

   

2-(1-Naphthyl)acetamide

alpha-Naphthaleneacetic acid amide

C12H11NO (185.0841)


Plant growth regulator. Plant growth regulator

   

1-Naphthaleneacetic acid

1-Naphthaleneacetic acid, plant cell culture tested, BioReagent, >=95\\%, crystalline

C12H10O2 (186.0681)


Plant growth regulator. 1-Naphthaleneacetic acid is used for control of preharvest fruit drop, flower induction and fruit thinning in various crops such as apples, potatoes, olives and citrus fruits.1-Naphthaleneacetic acid (NAA) is a plant hormone in the auxin family. It is a rooting agent and used for the vegetative propagation of plants from stem and leaf cutting. It is also used for plant tissue culture. NAA does not occur naturally. Under the Federal Insecticide, Fungicide, and Rodenticide Act (FIFRA), products containing NAA require registration with the Environmental Protection Agency (EPA) as pesticides. (Wikipedia 1-naphthaleneacetic acid is a naphthylacetic acid substituted by a carboxymethyl group at position 1. It has a role as a synthetic auxin. It is a conjugate acid of a 1-naphthaleneacetate. 1-Naphthylacetic acid is a natural product found in Cocos nucifera, Humulus lupulus, and other organisms with data available. 1-Naphthaleneacetic acid (1-Naphthylacetic acid), a auxin, can promote plant growth. 1-Naphthaleneacetic acid is also an inhibitor of PLA2, with an IC50 of 13.16 μM[1][2]. 1-Naphthaleneacetic acid (1-Naphthylacetic acid), a auxin, can promote plant growth. 1-Naphthaleneacetic acid is also an inhibitor of PLA2, with an IC50 of 13.16 μM[1][2].

   

Octopine

N2-(D-1-Carboxyethyl)-L-arginine

C9H18N4O4 (246.1328)


The (1R)-1-carboxyethyl derivative of L-arginine. It is a metabolite released by plant tumours. KEIO_ID O009; [MS2] KO009138 KEIO_ID O009

   

Nopaline

N-[(1S)-4-carbamimidamido-1-carboxybutyl]-D-glutamic acid

C11H20N4O6 (304.1383)


   

Mannopine

AGN-PC-0OKTBE

C11H22N2O8 (310.1376)


A hexitol derivative that is D-mannitol in which the hydroxy group at position 1 is replaced by the alpha-amino group of L-glutamine. It is produced in crown gall tumours induced in a wide range of dicotyledenous plants by Agrobacterium tumefaciens.

   

Octopine

5-carbamimidamido-2-[(1-carboxyethyl)amino]pentanoic acid

C9H18N4O4 (246.1328)


   

1-Naphthylacetic acid

1-Naphthaleneacetic acid

C12H10O2 (186.0681)


1-Naphthaleneacetic acid (1-Naphthylacetic acid), a auxin, can promote plant growth. 1-Naphthaleneacetic acid is also an inhibitor of PLA2, with an IC50 of 13.16 μM[1][2]. 1-Naphthaleneacetic acid (1-Naphthylacetic acid), a auxin, can promote plant growth. 1-Naphthaleneacetic acid is also an inhibitor of PLA2, with an IC50 of 13.16 μM[1][2].

   

1-NAPHTHALENEACETAMIDE

2-(1-Naphthyl)acetamide

C12H11NO (185.0841)


   

N2-(D-1-Carboxyethyl)-L-arginine

N2-(D-1-Carboxyethyl)-L-arginine

C9H18N4O4 (246.1328)


   

DL-Alanyl-DL-alanine

DL-Alanyl-DL-alanine

C6H12N2O3 (160.0848)