1-hydroxylycopene (BioDeep_00000014923)

human metabolite natural product

代谢物信息卡片

(6E,8E,10E,12E,14E,16E,18E,20E,22E,24E,26E)-2,6,10,14,19,23,27,31-Octamethyldotriaconta-6,8,10,12,14,16,18,20,22,24,26,30-dodecaen-2-ol

化学式: C40H58O (554.4487)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(lipidomics) 9.65%

分子结构信息

SMILES: C(=C(\CCCC(O)(C)C)/C)/C=C/C(=C/C=C/C(=C/C=C/C=C(/C=C/C=C(/C=C/C=C(/CCC=C(C)C)\C)\C)\C)/C)/C
InChI: InChI=1S/C40H58O/c1-33(2)19-13-22-36(5)25-16-28-37(6)26-14-23-34(3)20-11-12-21-35(4)24-15-27-38(7)29-17-30-39(8)31-18-32-40(9,10)41/h11-12,14-17,19-21,23-30,41H,13,18,22,31-32H2,1-10H3/b12-11+,23-14+,24-15+,28-16+,29-17+,34-20+,35-21+,36-25+,37-26+,38-27+,39-30+

描述信息

1-hydroxylycopene, also known as 1-hydroxy-1,2-dihydrolycopene or 1,2-dihydro-1-hydroxy-psi,psi-carotene, is a member of the class of compounds known as xanthophylls. Xanthophylls are carotenoids containing an oxygenated carotene backbone. Carotenes are characterized by the presence of two end-groups (mostly cyclohexene rings, but also cyclopentene rings or acyclic groups) linked by a long branched alkyl chain. Carotenes belonging form a subgroup of the carotenoids family. Xanthophylls arise by oxygenation of the carotene backbone. Thus, 1-hydroxylycopene is considered to be an isoprenoid lipid molecule. 1-hydroxylycopene is practically insoluble (in water) and an extremely weak acidic compound (based on its pKa). 1-hydroxylycopene can be found in a number of food items such as summer grape, red bell pepper, loganberry, and lima bean, which makes 1-hydroxylycopene a potential biomarker for the consumption of these food products.
D020011 - Protective Agents > D000975 - Antioxidants > D002338 - Carotenoids

同义名列表

8 个代谢物同义名

(6E,8E,10E,12E,14E,16E,18E,20E,22E,24E,26E)-2,6,10,14,19,23,27,31-Octamethyldotriaconta-6,8,10,12,14,16,18,20,22,24,26,30-dodecaen-2-ol; all-trans-2,6,10,14,19,23,27,31-Octamethyldotriaconta-6,8,10,12,14,16,18,20,22,24,26,30-dodecaen-2-ol; 1,2-Dihydro-1-hydroxy-psi,psi-carotene; 1,2-Dihydro-psi,psi-caroten-1-ol; 1-Hydroxy-1,2-dihydrolycopene; 1,2-Dihydro-1-hydroxylycopene; 1-Hydroxylycopene; Rhodopin

数据库引用编号

14 个数据库交叉引用编号

ChEBI: CHEBI:35331
KEGG: C19795
PubChem: 5365880
HMDB: HMDB0304015
Wikipedia: Rhodopin
MetaCyc: CPD-11447
KNApSAcK: C00022854
foodb: FDB030248
chemspider: 4517822
CAS: 105-92-0
PubChem: 135626262
LipidMAPS: LMPR01070114
PDB-CCD: IRM
LOTUS: LTS0053322

分类词条

代谢反应

3 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(3)

flexixanthin biosynthesis: A + rhodopin ⟶ 3,4-didehydrorhodopin + A(H2)
spirilloxanthin and 2,2'-diketo-spirilloxanthin biosynthesis: 2-oxospirilloxanthin + H⁺ + O₂ + a reduced ferredoxin [iron-sulfur] cluster ⟶ 2,2'-dioxospirilloxanthin + H₂O + an oxidized ferredoxin [iron-sulfur] cluster
myxol-2' fucoside biosynthesis: rhodopin ⟶ 1'-hydroxy-γ-carotene

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

27 个相关的物种来源信息

643217 - Afifella: LTS0053322
1080 - Afifella marina: 10.1562/0031-8655(2001)0740444TDCITC2.0.CO2
1080 - Afifella marina: LTS0053322
28211 - Alphaproteobacteria: LTS0053322
2 - Bacteria: LTS0053322
1046 - Chromatiaceae: LTS0053322
1236 - Gammaproteobacteria: LTS0053322
9606 - Homo sapiens: -
45401 - Hyphomicrobiaceae: LTS0053322
53452 - Lamprocystis: LTS0053322
85265 - Phaeospirillum: 10.1007/S00284-011-9941-1
85265 - Phaeospirillum: LTS0053322
1060 - Rhodobacter: LTS0053322
1061 - Rhodobacter capsulatus: 10.1248/CPB.45.1225
1061 - Rhodobacter capsulatus: LTS0053322
119043 - Rhodobiaceae: LTS0053322
34016 - Rhodobium: LTS0053322
1068 - Rhodomicrobium: LTS0053322
1069 - Rhodomicrobium vannielii:
1069 - Rhodomicrobium vannielii: 10.1016/0031-9422(75)80358-X
1069 - Rhodomicrobium vannielii: 10.1128/JB.59.2.169-170.1950
1069 - Rhodomicrobium vannielii: LTS0053322
41295 - Rhodospirillaceae: LTS0053322
86671 - Roseospira: 10.1007/S00284-011-9941-1
86671 - Roseospira: LTS0053322
53392 - Thiodictyon: 10.3891/ACTA.CHEM.SCAND.24-2705
53392 - Thiodictyon: LTS0053322

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位		关联基因列表

文献列表

M J Prathyash Ushus, B Divyasree, K V N S Lakshmi, Bharti P Dave, Ch Sasikala, Ch V Ramana. Description of a phototrophic bacterium, Thiorhodococcus alkaliphilus sp. nov. International journal of systematic and evolutionary microbiology. 2017 Jul; 67(7):2323-2327. doi: 10.1099/ijsem.0.001947. [PMID: 28693683]
K V N S Lakshmi, B Divyasree, K Sucharita, Ch Sasikala, Ch V Ramana. Thiorhodococcus fuscus sp. nov., isolated from a lagoon. International journal of systematic and evolutionary microbiology. 2015 Nov; 65(11):3938-3943. doi: 10.1099/ijsem.0.000517. [PMID: 26268573]
K V N S Lakshmi, Ch Sasikala, E V V Ramaprasad, Ch V Ramana. Rhodospirillum oryzae sp. nov., a phototrophic bacterium isolated from rhizosphere soil of paddy. International journal of systematic and evolutionary microbiology. 2013 Aug; 63(Pt 8):3050-3055. doi: 10.1099/ijs.0.049023-0. [PMID: 23416569]
K V N S Lakshmi, Ch Sasikala, G V Ashok Kumar, R Chandrasekaran, Ch V Ramana. Phaeovibrio sulfidiphilus gen. nov., sp. nov., phototrophic alphaproteobacteria isolated from brackish water. International journal of systematic and evolutionary microbiology. 2011 Apr; 61(Pt 4):828-833. doi: 10.1099/ijs.0.018911-0. [PMID: 20495036]