Cucumopine (BioDeep_00001869831)

Main id: BioDeep_00000006804

 


代谢物信息卡片


Cucumopine

化学式: C11H13N3O6 (283.0804)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C[C@]1(c2c(C[C@@H](C(=O)O)N1)[nH]cn2)C(=O)O)C(=O)O
InChI: InChI=1S/C11H13N3O6/c15-7(16)1-2-11(10(19)20)8-5(12-4-13-8)3-6(14-11)9(17)18/h4,6,14H,1-3H2,(H,12,13)(H,15,16)(H,17,18)(H,19,20)/t6-,11-/m0/s1

描述信息

同义名列表

2 个代谢物同义名

Cucumopine; Cucumopine



数据库引用编号

11 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。



文献列表

  • Viera Kovacova, Jitka Zluvova, Bohuslav Janousek, Martina Talianova, Boris Vyskot. The evolutionary fate of the horizontally transferred agrobacterial mikimopine synthase gene in the genera Nicotiana and Linaria. PloS one. 2014; 9(11):e113872. doi: 10.1371/journal.pone.0113872. [PMID: 25420106]
  • Simon A Weller, David E Stead, J Peter W Young. Recurrent outbreaks of root mat in cucumber and tomato are associated with a monomorphic, cucumopine, Ri-plasmid harboured by various Alphaproteobacteria. FEMS microbiology letters. 2006 May; 258(1):136-43. doi: 10.1111/j.1574-6968.2006.00214.x. [PMID: 16630268]
  • Reda E A Moghaieb, Hirofumi Saneoka, Kounosuke Fujita. Shoot regeneration from GUS-transformed tomato (Lycopersicon esculentum) hairy root. Cellular & molecular biology letters. 2004; 9(3):439-49. doi: . [PMID: 15332121]
  • K Moriguchi, Y Maeda, M Satou, N S Hardayani, M Kataoka, N Tanaka, K Yoshida. The complete nucleotide sequence of a plant root-inducing (Ri) plasmid indicates its chimeric structure and evolutionary relationship between tumor-inducing (Ti) and symbiotic (Sym) plasmids in Rhizobiaceae. Journal of molecular biology. 2001 Mar; 307(3):771-84. doi: 10.1006/jmbi.2001.4488. [PMID: 11273700]
  • K Suzuki, N Tanaka, H Kamada, I Yamashita. Mikimopine synthase (mis) gene on pRi1724. Gene. 2001 Jan; 263(1-2):49-58. doi: 10.1016/s0378-1119(00)00578-3. [PMID: 11223242]
  • H J Cho, S K Farrand, G R Noel, J M Widholm. High-efficiency induction of soybean hairy roots and propagation of the soybean cyst nematode. Planta. 2000 Jan; 210(2):195-204. doi: 10.1007/pl00008126. [PMID: 10664125]
  • C Fründt, A D Meyer, T Ichikawa, F Meins. A tobacco homologue of the Ri-plasmid orf13 gene causes cell proliferation in carrot root discs. Molecular & general genetics : MGG. 1998 Oct; 259(6):559-68. doi: 10.1007/s004380050849. [PMID: 9819048]
  • G Serino, D Clerot, J Brevet, P Costantino, M Cardarelli. rol genes of Agrobacterium rhizogenes cucumopine strain: sequence, effects and pattern of expression. Plant molecular biology. 1994 Oct; 26(1):415-22. doi: 10.1007/bf00039550. [PMID: 7948887]
  • S Kiyokawa, K Kobayashi, Y Kikuchi, H Kamada, H Harada. Root-inducing region of mikimopine type Ri plasmid pRi1724. Plant physiology. 1994 Feb; 104(2):801-2. doi: 10.1104/pp.104.2.801. [PMID: 8159796]
  • M C Failla, F Maimone, A De Paolis, P Costantino, M Cardarelli. The non-conserved region of cucumopine-type Agrobacterium rhizogenes T-DNA is responsible for hairy root induction. Plant molecular biology. 1990 Nov; 15(5):747-53. doi: 10.1007/bf00016124. [PMID: 2102883]