2-Pyrone-4,6-dicarboxylate (BioDeep_00000005273)
Secondary id: BioDeep_00001869583
代谢物信息卡片
化学式: C7H4O6 (184.0008)
中文名称:
谱图信息:
最多检出来源 Homo sapiens(blood) 7.49%
分子结构信息
SMILES: C1=C(C=C(OC1=O)C(=O)O)C(=O)O
InChI: InChI=1S/C7H4O6/c8-5-2-3(6(9)10)1-4(13-5)7(11)12/h1-2H,(H,9,10)(H,11,12)
数据库引用编号
10 个数据库交叉引用编号
- ChEBI: CHEBI:17872
- KEGG: C03671
- PubChem: 372
- Metlin: METLIN66020
- CAS: 72698-24-9
- PMhub: MS000018028
- PubChem: 6447
- PDB-CCD: 0GZ
- 3DMET: B00616
- NIKKAJI: J1.089.989C
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
2 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(2)
- methylgallate degradation:
H+ + oxaloacetate ⟶ CO2 + pyruvate - protocatechuate degradation I (meta-cleavage pathway):
O2 + protocatechuate ⟶ 2-hydroxy-4-carboxymuconate-6-semialdehyde + H+
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
| 亚细胞结构定位 | 关联基因列表 | |
|---|---|---|
| Cytoplasm | 1 | SYK |
| Nucleus | 1 | SYK |
| cytosol | 1 | SYK |
| Cell membrane | 1 | SYK |
| Cytoplasm, cytosol | 1 | SYK |
| plasma membrane | 1 | SYK |
| protein-containing complex | 1 | SYK |
| early phagosome | 1 | SYK |
| T cell receptor complex | 1 | SYK |
| B cell receptor complex | 1 | SYK |
文献列表
- Izabela Fecka, Katarzyna Bednarska, Maciej Włodarczyk. Fragaria × ananassa cv. Senga Sengana Leaf: An Agricultural Waste with Antiglycation Potential and High Content of Ellagitannins, Flavonols, and 2-Pyrone-4,6-dicarboxylic Acid.
Molecules (Basel, Switzerland).
2022 Aug; 27(16):. doi:
10.3390/molecules27165293. [PMID: 36014531] - Chien-Yuan Lin, Khanh M Vuu, Bashar Amer, Patrick M Shih, Edward E K Baidoo, Henrik V Scheller, Aymerick Eudes. In-planta production of the biodegradable polyester precursor 2-pyrone-4,6-dicarboxylic acid (PDC): Stacking reduced biomass recalcitrance with value-added co-product.
Metabolic engineering.
2021 07; 66(?):148-156. doi:
10.1016/j.ymben.2021.04.011. [PMID: 33895365] - Sandra Notonier, Allison Z Werner, Eugene Kuatsjah, Linda Dumalo, Paul E Abraham, E Anne Hatmaker, Caroline B Hoyt, Antonella Amore, Kelsey J Ramirez, Sean P Woodworth, Dawn M Klingeman, Richard J Giannone, Adam M Guss, Robert L Hettich, Lindsay D Eltis, Christopher W Johnson, Gregg T Beckham. Metabolism of syringyl lignin-derived compounds in Pseudomonas putida enables convergent production of 2-pyrone-4,6-dicarboxylic acid.
Metabolic engineering.
2021 05; 65(?):111-122. doi:
10.1016/j.ymben.2021.02.005. [PMID: 33741529] - Yuzo Suzuki, Yuriko Okamura-Abe, Masaya Nakamura, Yuichiro Otsuka, Takuma Araki, Hiroyuki Otsuka, Ronald Ragudo Navarro, Naofumi Kamimura, Eiji Masai, Yoshihiro Katayama. Development of the production of 2-pyrone-4,6-dicarboxylic acid from lignin extracts, which are industrially formed as by-products, as raw materials.
Journal of bioscience and bioengineering.
2020 Jul; 130(1):71-75. doi:
10.1016/j.jbiosc.2020.02.002. [PMID: 32238321] - Kazuhiro Shikinaka, Yuichiro Otsuka, Masaya Nakamura, Eiji Masai, Yoshihiro Katayama. Utilization of Lignocellulosic Biomass via Novel Sustainable Process.
Journal of oleo science.
2018 Sep; 67(9):1059-1070. doi:
10.5650/jos.ess18075. [PMID: 30111682] - Yuichiro Otsuka, Masaya Nakamura, Kiyotaka Shigehara, Kosuke Sugimura, Eiji Masai, Seiji Ohara, Yoshihiro Katayama. Efficient production of 2-pyrone 4,6-dicarboxylic acid as a novel polymer-based material from protocatechuate by microbial function.
Applied microbiology and biotechnology.
2006 Aug; 71(5):608-14. doi:
10.1007/s00253-005-0203-7. [PMID: 16322989]
