Zytosin (BioDeep_00000868361)
Main id: BioDeep_00000400022
PANOMIX_OTCML-2023 BioNovoGene_Lab2019 Volatile Flavor Compounds
代谢物信息卡片
化学式: C4H5N3O (111.04326000000002)
中文名称: 胞嘧啶
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C1=C(NC(=O)N=C1)N
InChI: InChI=1S/C4H5N3O/c5-3-1-2-6-4(8)7-3/h1-2H,(H3,5,6,7,8)
描述信息
COVID info from COVID-19 Disease Map
Corona-virus
Coronavirus
SARS-CoV-2
COVID-19
SARS-CoV
COVID19
SARS2
SARS
Cytosine is one of the four main bases found in DNA and RNA. Cytosine modifications exhibit circadian oscillations that are involved in epigenetic diversity and aging[1][2].
Cytosine is one of the four main bases found in DNA and RNA. Cytosine modifications exhibit circadian oscillations that are involved in epigenetic diversity and aging[1][2].
Cytosine is one of the four main bases found in DNA and RNA. Cytosine modifications exhibit circadian oscillations that are involved in epigenetic diversity and aging[1][2].
同义名列表
36 个代谢物同义名
InChI=1\C4H5N3O\c5-3-1-2-6-4(8)7-3\h1-2H,(H3,5,6,7,8; 4-amino-2-oxo-1,2-dihydropyrimidine; 2(1H)-Pyrimidinone, 4-amino- (9CI); 2(1H)-pyrimidinone, 6-amino-; 2(1H)-Pyrimidinone, 4-amino-; 4-Amino-2-hydroxypyrimidine; 4-aminopyrimidin-2(1H)-one; 4-Amino-2(1H)-pyrimidinone; 4-amino-3h-pyrimidin-2-one; 4-amino-2-pyrimidinol; EINECS 200-749-5; Cytosine (8CI); ZINC00895210; Cytosinimine; NCI60_012445; C3506_SIGMA; AIDS-023056; 118511-36-7; 30430_FLUKA; CHEBI:16040; AIDS023056; 14987-28-1; 26661-23-4; 66322-75-6; NSC 27787; AI3-52281; 504-05-2; NSC27787; Cytosine; Zytosin; Cytosin; 71-30-7; C00380; Cyt; Cytosine; Cytosine
数据库引用编号
18 个数据库交叉引用编号
- ChEBI: CHEBI:16040
- KEGG: C00380
- PubChem: 597
- ChEMBL: CHEMBL15913
- MeSH: Cytosine
- CAS: 107646-83-3
- CAS: 134434-39-2
- CAS: 134434-40-5
- CAS: 107646-84-4
- CAS: 71-30-7
- PubChem: 3670
- KNApSAcK: C00001498
- PDB-CCD: CYT
- 3DMET: B00097
- NIKKAJI: J9.343B
- medchemexpress: HY-I0626
- BioNovoGene_Lab2019: BioNovoGene_Lab2019-22
- KNApSAcK: 16040
分类词条
相关代谢途径
Reactome(0)
BioCyc(3)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
12 个相关的物种来源信息
- 654 - Aeromonas veronii: 10.3389/FCIMB.2020.00044
- 7461 - Apis cerana: 10.1371/JOURNAL.PONE.0175573
- 3039 - Euglena gracilis: 10.3389/FBIOE.2021.662655
- 9606 - Homo sapiens:
- 37501 - Maackia amurensis: 10.2307/4117899
- 28901 - Salmonella enterica:
- 1890 - Streptomyces antibioticus: 10.7164/ANTIBIOTICS.45.1914
- 32046 - Synechococcus elongatus: 10.1111/1462-2920.12899
- 5691 - Trypanosoma brucei: 10.1371/JOURNAL.PNTD.0001618
- 29760 - Vitis vinifera: 10.1016/J.DIB.2020.106469
- 33090 - 土贝母: -
- 569774 - 金线莲: -
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
文献列表
- Anabella Varela, Carlos F Marfil, Sebastián Gomez Talquenca, Ariel Fontana, Sebastian Asurmendi, Fernando Buscema, Federico J Berli. Three-year study of DNA cytosine methylation dynamics in transplanted Malbec grapevines.
Plant science : an international journal of experimental plant biology.
2024 May; 342(?):112037. doi:
10.1016/j.plantsci.2024.112037
. [PMID: 38367820] - Dingbo Zhang, Vanessa Pries, Jens Boch. Targeted C•G-to-T•A base editing with TALE-cytosine deaminases in plants.
BMC biology.
2024 Apr; 22(1):99. doi:
10.1186/s12915-024-01895-0
. [PMID: 38679734] - Ying Yu, Zhijia Gu, Maokang Li, Yongfu Pu, Ariadni Geballa Koukoula, Jeroen Peters, Ying Yang, Xiaodi Hong. Cytosine-rich mismatched DNA aptamer combined with superparamagnetic photonic crystal sensing material for the specific visual detection of silver ions.
Talanta.
2024 Apr; 270(?):125551. doi:
10.1016/j.talanta.2023.125551
. [PMID: 38103284] - Rajesh Yarra, Patrick J Krysan. An SpG-Cas9-based cytosine base editor expands the scope of genome editing in carrot plants.
Plant cell reports.
2024 Mar; 43(3):82. doi:
10.1007/s00299-024-03173-3
. [PMID: 38441656] - Zongyi Yi, Xiaoxue Zhang, Wei Tang, Ying Yu, Xiaoxu Wei, Xue Zhang, Wensheng Wei. Strand-selective base editing of human mitochondrial DNA using mitoBEs.
Nature biotechnology.
2024 Mar; 42(3):498-509. doi:
10.1038/s41587-023-01791-y
. [PMID: 37217751] - Pin Cui, Xiaozhou Zhou, Shu Xu, Weihuang He, Guozeng Huang, Yong Xiong, Chuxin Zhang, Tingmin Chang, Mingji Feng, Hanming Lai, Yi Pan. Prediction of methylation status using WGS data of plasma cfDNA for multi-cancer early detection (MCED).
Clinical epigenetics.
2024 02; 16(1):34. doi:
10.1186/s13148-024-01646-6
. [PMID: 38414068] - Xiaoling Ma, Ningxin Jiang, Jingxian Fu, Yuping Li, Lijun Zhou, Ling Yuan, Ying Wang, Yongqing Li. A cytosine analogue 5-azacitidine improves the accumulation of licochalcone A in licorice Glycyrrhiza inflata.
Journal of plant physiology.
2023 Nov; 292(?):154145. doi:
10.1016/j.jplph.2023.154145
. [PMID: 38091890] - Patrick M Staunton, Andrew J Peters, Cathal Seoighe. Somatic mutations inferred from RNA-seq data highlight the contribution of replication timing to mutation rate variation in a model plant.
Genetics.
2023 10; 225(2):. doi:
10.1093/genetics/iyad128
. [PMID: 37450609] - Muhammad Arslan Mahmood. Efficient A·T-to-C·G Base Editing via Adenine Transversion Editors.
Cellular reprogramming.
2023 10; 25(5):187-189. doi:
10.1089/cell.2023.0094
. [PMID: 37725011] - Pei Liu, Xiao-Ying Tan, Huang-Qin Zhang, Ke-Lei Su, Er-Xin Shang, Qing-Ling Xiao, Sheng Guo, Jin-Ao Duan. Optimal compatibility proportional screening of Trichosanthis Pericarpium - Trichosanthis Radix and its anti - Inflammatory components effect on experimental zebrafish and coughing mice.
Journal of ethnopharmacology.
2023 Aug; ?(?):117096. doi:
10.1016/j.jep.2023.117096
. [PMID: 37634750] - Zahra Tardast, Alireza Iranbakhsh, Mostafa Ebadi, Zahra Oraghi Ardebili. Carboxylic acid-functionalized multiwalled carbon nanotubes (COOH-MWCNTs) improved production of atropine in callus of Datura inoxia by influencing metabolism, gene regulation, and DNA cytosine methylation; an in vitro biological assessment.
Plant physiology and biochemistry : PPB.
2023 Aug; 202(?):107975. doi:
10.1016/j.plaphy.2023.107975
. [PMID: 37634333] - Jiaying Huang, Qiupeng Lin, Hongyuan Fei, Zixin He, Hu Xu, Yunjia Li, Kunli Qu, Peng Han, Qiang Gao, Boshu Li, Guanwen Liu, Lixiao Zhang, Jiacheng Hu, Rui Zhang, Erwei Zuo, Yonglun Luo, Yidong Ran, Jin-Long Qiu, Kevin Tianmeng Zhao, Caixia Gao. Discovery of deaminase functions by structure-based protein clustering.
Cell.
2023 07; 186(15):3182-3195.e14. doi:
10.1016/j.cell.2023.05.041
. [PMID: 37379837] - Chen Zhang, Xue Zhong, Shaoya Li, Lei Yan, Jingying Li, Yubing He, Yong Lin, Yangjun Zhang, Lanqin Xia. Artificial evolution of OsEPSPS through an improved dual cytosine and adenine base editor generated a novel allele conferring rice glyphosate tolerance.
Journal of integrative plant biology.
2023 Jul; ?(?):. doi:
10.1111/jipb.13543
. [PMID: 37402157] - Lei Shi, Xiaona Li, Lulu Xue, Jin Zhang, Bingyan Huang, Ziqi Sun, Zhongxin Zhang, Xiaodong Dai, Suoyi Han, Wenzhao Dong, Xinyou Zhang. Creation of herbicide-resistance in allotetraploid peanut using CRISPR/Cas9-meditated cytosine base-editing.
Plant biotechnology journal.
2023 Jul; ?(?):. doi:
10.1111/pbi.14114
. [PMID: 37399127] - Zhixin Lei, Haowei Meng, Xichen Rao, Huanan Zhao, Chengqi Yi. Detect-seq, a chemical labeling and biotin pull-down approach for the unbiased and genome-wide off-target evaluation of programmable cytosine base editors.
Nature protocols.
2023 07; 18(7):2221-2255. doi:
10.1038/s41596-023-00837-4
. [PMID: 37277562] - Navneet Kaur, Swapna Nayakoti, Natasha Brock, Nigel G Halford. Uncovering plant epigenetics: new insights into cytosine methylation in rye genomes.
Journal of experimental botany.
2023 06; 74(12):3395-3398. doi:
10.1093/jxb/erad144
. [PMID: 37369102] - Baogang Wang, Binwang Cao, Zhu-Chun Bei, Likun Xu, Dongna Zhang, Liangliang Zhao, Yabin Song, Hongquan Wang. Disulfide-incorporated lipid prodrugs of cidofovir: Synthesis, antiviral activity, and release mechanism.
European journal of medicinal chemistry.
2023 Jun; 258(?):115601. doi:
10.1016/j.ejmech.2023.115601
. [PMID: 37390509] - Juan Luo, Muhammad Abid, Jing Tu, Xinxia Cai, Yi Zhang, Puxin Gao, Hongwen Huang. Cytosine base editors (CBEs) for inducing targeted DNA base editing in Nicotiana benthamiana.
BMC plant biology.
2023 Jun; 23(1):305. doi:
10.1186/s12870-023-04322-8
. [PMID: 37286962] - Mauricio Orantes-Bonilla, Hao Wang, Huey Tyng Lee, Agnieszka A Golicz, Dandan Hu, Wenwen Li, Jun Zou, Rod J Snowdon. Transgressive and parental dominant gene expression and cytosine methylation during seed development in Brassica napus hybrids.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik.
2023 Apr; 136(5):113. doi:
10.1007/s00122-023-04345-7
. [PMID: 37071201] - Rahul Mahadev Shelake, Dibyajyoti Pramanik, Jae-Yean Kim. Improved Dual Base Editor Systems (iACBEs) for Simultaneous Conversion of Adenine and Cytosine in the Bacterium Escherichia coli.
mBio.
2023 02; 14(1):e0229622. doi:
10.1128/mbio.02296-22
. [PMID: 36625577] - Li Mi, Ming Shi, Yu-Xuan Li, Gang Xie, Xichen Rao, Damu Wu, Aimin Cheng, Mengxiao Niu, Fengli Xu, Ying Yu, Ning Gao, Wensheng Wei, Xianhua Wang, Yangming Wang. DddA homolog search and engineering expand sequence compatibility of mitochondrial base editing.
Nature communications.
2023 02; 14(1):874. doi:
10.1038/s41467-023-36600-2
. [PMID: 36797253] - Mieun Lee, Yu Been Heo, Han Min Woo. Cytosine base editing in cyanobacteria by repressing archaic Type IV uracil-DNA glycosylase.
The Plant journal : for cell and molecular biology.
2023 02; 113(3):610-625. doi:
10.1111/tpj.16074
. [PMID: 36565011] - Shuqian Zhang, Liting Song, Bo Yuan, Cheng Zhang, Jixin Cao, Jinlong Chen, Jiayi Qiu, Yilin Tai, Jingqi Chen, Zilong Qiu, Xing-Ming Zhao, Tian-Lin Cheng. TadA reprogramming to generate potent miniature base editors with high precision.
Nature communications.
2023 01; 14(1):413. doi:
10.1038/s41467-023-36004-2
. [PMID: 36702845] - Chenhao Li, Longfei Wang, Leland J Cseke, Fernanda Vasconcelos, Jose Carlos Huguet-Tapia, Walter Gassmann, Laurens Pauwels, Frank F White, Hansong Dong, Bing Yang. Efficient CRISPR-Cas9 based cytosine base editors for phytopathogenic bacteria.
Communications biology.
2023 01; 6(1):56. doi:
10.1038/s42003-023-04451-8
. [PMID: 36646768] - Yi-Fang Chen, Yan Wang, Yue Wang, Ying-Li Luo, Zi-Dong Lu, Xiao-Jiao Du, Cong-Fei Xu, Jun Wang. Optimized Cationic Lipid-assisted Nanoparticle for Delivering CpG Oligodeoxynucleotides to Treat Hepatitis B Virus Infection.
Pharmaceutical research.
2023 Jan; 40(1):145-156. doi:
10.1007/s11095-022-03307-w
. [PMID: 36002611] - S Wang, K Ouyang. Rapid creation of CENH3-mediated haploid induction lines using a cytosine base editor (CBE).
Plant biology (Stuttgart, Germany).
2023 Jan; 25(1):226-230. doi:
10.1111/plb.13482
. [PMID: 36285668] - A Niloya Troyee, Cristian Peña-Ponton, Mónica Medrano, Koen J F Verhoeven, Conchita Alonso. Herbivory induced methylation changes in the Lombardy poplar: A comparison of results obtained by epiGBS and WGBS.
PloS one.
2023; 18(9):e0291202. doi:
10.1371/journal.pone.0291202
. [PMID: 37682835] - Ya-Ting Sabrina Chang, Ming-Ren Yen, Pao-Yang Chen. Methylome Imputation by Methylation Patterns.
Methods in molecular biology (Clifton, N.J.).
2023; 2624(?):115-126. doi:
10.1007/978-1-0716-2962-8_8
. [PMID: 36723812] - Renata Orłowska. Triticale doubled haploid plant regeneration factors linked by structural equation modeling.
Journal of applied genetics.
2022 Dec; 63(4):677-690. doi:
10.1007/s13353-022-00719-7
. [PMID: 36018540] - Waldir M Berbel-Filho, George Pacheco, Mateus G Lira, Carlos Garcia de Leaniz, Sergio M Q Lima, Carlos M Rodríguez-López, Jia Zhou, Sofia Consuegra. Additive and non-additive epigenetic signatures of natural hybridization between fish species with different mating systems.
Epigenetics.
2022 12; 17(13):2356-2365. doi:
10.1080/15592294.2022.2123014
. [PMID: 36082413] - Marandel L, Heraud C, Véron V, Laithier J, Marchand M, Quillet E, Callet T, Dupont-Nivet M, Médale F. A plant-based diet differentially affects the global hepatic methylome in rainbow trout depending on genetic background.
Epigenetics.
2022 12; 17(12):1726-1737. doi:
10.1080/15592294.2022.2058226
. [PMID: 35345978] - Lai Wong, Alina Sami, Linda Chelico. Competition for DNA binding between the genome protector replication protein A and the genome modifying APOBEC3 single-stranded DNA deaminases.
Nucleic acids research.
2022 11; 50(21):12039-12057. doi:
10.1093/nar/gkac1121
. [PMID: 36444883] - Xiao-Cong Zhao, Hai-Long Dong, Xiao-Lu Li, Hong-Yu Yang, Xue-Feng Chen, Liang Dai, Wen-Qiang Wu, Zhi-Jie Tan, Xing-Hua Zhang. 5-Methyl-cytosine stabilizes DNA but hinders DNA hybridization revealed by magnetic tweezers and simulations.
Nucleic acids research.
2022 11; 50(21):12344-12354. doi:
10.1093/nar/gkac1122
. [PMID: 36477372] - Hongzhi Wang, Yuxin He, Yingying Wang, Zuren Li, Jiannan Hao, Yijiao Song, Mugui Wang, Jian-Kang Zhu. Base editing-mediated targeted evolution of ACCase for herbicide-resistant rice mutants.
Journal of integrative plant biology.
2022 Nov; 64(11):2029-2032. doi:
10.1111/jipb.13352
. [PMID: 36036619] - Guilian Xiao, Junzhi Zhou, Zhiheng Huo, Tong Wu, Yingchun Li, Yajing Li, Yanxia Wang, Mengcheng Wang. The Shift in Synonymous Codon Usage Reveals Similar Genomic Variation during Domestication of Asian and African Rice.
International journal of molecular sciences.
2022 Oct; 23(21):. doi:
10.3390/ijms232112860
. [PMID: 36361651] - Mauricio Peñuela, Jenny Johana Gallo-Franco, Jorge Finke, Camilo Rocha, Anestis Gkanogiannis, Thaura Ghneim-Herrera, Mathias Lorieux. Methylation in the CHH Context Allows to Predict Recombination in Rice.
International journal of molecular sciences.
2022 Oct; 23(20):. doi:
10.3390/ijms232012505
. [PMID: 36293364] - Kumari Alka, Ghulam Mohammad, Renu A Kowluru. Regulation of serine palmitoyl-transferase and Rac1-Nox2 signaling in diabetic retinopathy.
Scientific reports.
2022 10; 12(1):16740. doi:
10.1038/s41598-022-20243-2
. [PMID: 36202842] - Jia-Yi Lin, Way-Rong Lin, I-Son Ng. CRISPRa/i with Adaptive Single Guide Assisted Regulation DNA (ASGARD) mediated control of Chlorella sorokiniana to enhance lipid and protein production.
Biotechnology journal.
2022 Oct; 17(10):e2100514. doi:
10.1002/biot.202100514
. [PMID: 34800080] - Daniela Strenkert, Asli Yildirim, Juying Yan, Yuko Yoshinaga, Matteo Pellegrini, Ronan C O'Malley, Sabeeha S Merchant, James G Umen. The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle.
The Plant journal : for cell and molecular biology.
2022 10; 112(2):352-368. doi:
10.1111/tpj.15948
. [PMID: 35986497] - Tslil Gabrieli, Yael Michaeli, Sigal Avraham, Dmitry Torchinsky, Sapir Margalit, Leonie Schütz, Matyas Juhasz, Ceyda Coruh, Nissim Arbib, Zhaohui Sunny Zhou, Julie A Law, Elmar Weinhold, Yuval Ebenstein. Chemoenzymatic labeling of DNA methylation patterns for single-molecule epigenetic mapping.
Nucleic acids research.
2022 09; 50(16):e92. doi:
10.1093/nar/gkac460
. [PMID: 35657088] - Chenchen Ma, Peng Liu, Siyuan Cui, Chang Gao, Xing Tan, Zhaopeng Liu, Ruirong Xu. The Identification of APOBEC3G as a Potential Prognostic Biomarker in Acute Myeloid Leukemia and a Possible Drug Target for Crotonoside.
Molecules (Basel, Switzerland).
2022 Sep; 27(18):. doi:
10.3390/molecules27185804
. [PMID: 36144542] - Martin Bitomský, Lucie Kobrlová, Michal Hroneš, Jitka Klimešová, Martin Duchoslav. Stoichiometry versus ecology: the relationships between genome size and guanine-cytosine content, and tissue nitrogen and phosphorus in grassland herbs.
Annals of botany.
2022 09; 130(2):189-197. doi:
10.1093/aob/mcac079
. [PMID: 35700050] - Andrej Sečnik, Nataša Štajner, Sebastjan Radišek, Urban Kunej, Mitja Križman, Jernej Jakše. Cytosine Methylation in Genomic DNA and Characterization of DNA Methylases and Demethylases and Their Expression Profiles in Viroid-Infected Hop Plants (Humulus lupulus Var. 'Celeia').
Cells.
2022 08; 11(16):. doi:
10.3390/cells11162592
. [PMID: 36010668] - Yulin Zheng, Yunlei Zhou, Xiaoting Cui, Hengming Yan, Lulu Cao, Lanlan Gao, Huanshun Yin. Investigation of the effect of antibiotics on 5-formylcytosine content in mazie seedling tissues based on photoelectrochemical biosensor.
Journal of hazardous materials.
2022 08; 436(?):129146. doi:
10.1016/j.jhazmat.2022.129146
. [PMID: 35594676] - Hardik Kundariya, Robersy Sanchez, Xiaodong Yang, Alenka Hafner, Sally A Mackenzie. Methylome decoding of RdDM-mediated reprogramming effects in the Arabidopsis MSH1 system.
Genome biology.
2022 08; 23(1):167. doi:
10.1186/s13059-022-02731-w
. [PMID: 35927734] - Sreejith Jayasree Varma, Enrica Calvani, Nana-Maria Grüning, Christoph B Messner, Nicholas Grayson, Floriana Capuano, Michael Mülleder, Markus Ralser. Global analysis of cytosine and adenine DNA modifications across the tree of life.
eLife.
2022 07; 11(?):. doi:
10.7554/elife.81002
. [PMID: 35900202] - Tomoyuki Otsuka, Sumiyuki Nishida, Takayuki Shibahara, Burcu Temizoz, Masanari Hamaguchi, Takayuki Shiroyama, Keiko Kimura, Kotaro Miyake, Haruhiko Hirata, Yumiko Mizuno, Mayu Yagita, Yusuke Manabe, Etsushi Kuroda, Yoshito Takeda, Hiroshi Kida, Ken J Ishii, Atsushi Kumanogoh. CpG ODN (K3)-toll-like receptor 9 agonist-induces Th1-type immune response and enhances cytotoxic activity in advanced lung cancer patients: a phase I study.
BMC cancer.
2022 Jul; 22(1):744. doi:
10.1186/s12885-022-09818-4
. [PMID: 35799134] - Zhixin Lei, Haowei Meng, Lulu Liu, Huanan Zhao, Xichen Rao, Yongchang Yan, Hao Wu, Min Liu, Aibin He, Chengqi Yi. Mitochondrial base editor induces substantial nuclear off-target mutations.
Nature.
2022 06; 606(7915):804-811. doi:
10.1038/s41586-022-04836-5
. [PMID: 35551512] - Fernanda Silva Coelho, Sara Sangi, Juliana Lopes Moraes, Walaci da Silva Santos, Eduardo Alves Gamosa, Kátia Valevski Sales Fernandes, Clícia Grativol. Methyl-CpG binding proteins (MBD) family evolution and conservation in plants.
Gene.
2022 May; 824(?):146404. doi:
10.1016/j.gene.2022.146404
. [PMID: 35278634] - Xiangyu Xiong, Zhenxiang Li, Jieping Liang, Kehui Liu, Chenlong Li, Jian-Feng Li. A cytosine base editor toolkit with varying activity windows and target scopes for versatile gene manipulation in plants.
Nucleic acids research.
2022 04; 50(6):3565-3580. doi:
10.1093/nar/gkac166
. [PMID: 35286371] - Xing Ma, Yilong Feng, Ying Yang, Xin Li, Yining Shi, Shentong Tao, Xuejiao Cheng, Jian Huang, Xiu-E Wang, Caiyan Chen, David Monchaud, Wenli Zhang. Genome-wide characterization of i-motifs and their potential roles in the stability and evolution of transposable elements in rice.
Nucleic acids research.
2022 04; 50(6):3226-3238. doi:
10.1093/nar/gkac121
. [PMID: 35188565] - Michael S Packer, Vivek Chowdhary, Genesis Lung, Lo-I Cheng, Yvonne Aratyn-Schaus, Dominique Leboeuf, Sarah Smith, Aalok Shah, Delai Chen, Marina Zieger, Brian J Cafferty, Bo Yan, Giuseppe Ciaramella, Francine M Gregoire, Christian Mueller. Evaluation of cytosine base editing and adenine base editing as a potential treatment for alpha-1 antitrypsin deficiency.
Molecular therapy : the journal of the American Society of Gene Therapy.
2022 04; 30(4):1396-1406. doi:
10.1016/j.ymthe.2022.01.040
. [PMID: 35121111] - Yuechao Wu, Yao He, Simon Sretenovic, Shishi Liu, Yanhao Cheng, Yangshuo Han, Guanqing Liu, Yu Bao, Qing Fang, Xuelian Zheng, Jianping Zhou, Yiping Qi, Yong Zhang, Tao Zhang. CRISPR-BETS: a base-editing design tool for generating stop codons.
Plant biotechnology journal.
2022 Mar; 20(3):499-510. doi:
10.1111/pbi.13732
. [PMID: 34669232] - Nozomu Hanaoka, Masatoshi Hazama, Koji Fukushima, Tsuguto Fujimoto. Sensitivity of Human Mastadenovirus, the Causal Agent of Pharyngoconjunctival Fever, Epidemic Keratoconjunctivitis, and Hemorrhagic Cystitis in Immunocompromised Individuals, to Brincidofovir.
Microbiology spectrum.
2022 02; 10(1):e0156921. doi:
10.1128/spectrum.01569-21
. [PMID: 35171015] - Zhiquan Liu, Siyu Chen, Liangxue Lai, Zhanjun Li. Inhibition of base editors with anti-deaminases derived from viruses.
Nature communications.
2022 02; 13(1):597. doi:
10.1038/s41467-022-28300-0
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Journal of animal science.
2022 Feb; 100(2):. doi:
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Analytica chimica acta.
2022 Feb; 1192(?):339321. doi:
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Genome biology.
2022 01; 23(1):5. doi:
10.1186/s13059-021-02578-7
. [PMID: 34980211] - HueyTyng Lee. Analysis of Bisulfite Sequencing Data Using Bismark and DMRcaller to Identify Differentially Methylated Regions.
Methods in molecular biology (Clifton, N.J.).
2022; 2443(?):451-463. doi:
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Science China. Life sciences.
2022 01; 65(1):219-222. doi:
10.1007/s11427-021-1970-x
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Biomacromolecules.
2021 12; 22(12):5307-5318. doi:
10.1021/acs.biomac.1c01199
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Nature biotechnology.
2021 11; 39(11):1403-1413. doi:
10.1038/s41587-021-00944-1
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Antiviral research.
2021 11; 195(?):105179. doi:
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The Plant journal : for cell and molecular biology.
2021 11; 108(3):841-858. doi:
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Nature communications.
2021 10; 12(1):5976. doi:
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Science China. Life sciences.
2021 Oct; 64(10):1624-1633. doi:
10.1007/s11427-020-1800-5
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Plant biotechnology journal.
2021 10; 19(10):2052-2068. doi:
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Genes.
2021 09; 12(10):. doi:
10.3390/genes12101467
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International journal of molecular sciences.
2021 Sep; 22(18):. doi:
10.3390/ijms22189877
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Molecular plant.
2021 09; 14(9):1412-1414. doi:
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Plant physiology.
2021 09; 187(1):73-87. doi:
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Genomics.
2021 09; 113(5):2953-2964. doi:
10.1016/j.ygeno.2021.06.037
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Molecular biology reports.
2021 Aug; 48(8):6057-6064. doi:
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Journal of integrative plant biology.
2021 Aug; 63(8):1491-1504. doi:
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Journal of molecular cell biology.
2021 07; 13(3):225-227. doi:
10.1093/jmcb/mjab011
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Genetics.
2021 06; 218(2):. doi:
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Analytical chemistry.
2021 06; 93(22):7787-7791. doi:
10.1021/acs.analchem.1c01548
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Nature methods.
2021 06; 18(6):643-651. doi:
10.1038/s41592-021-01172-w
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Biomedical chromatography : BMC.
2021 May; 35(5):e5061. doi:
10.1002/bmc.5061
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Journal of the American Chemical Society.
2021 04; 143(14):5413-5424. doi:
10.1021/jacs.1c00014
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Plant molecular biology.
2021 Apr; 105(6):611-623. doi:
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BMC bioinformatics.
2021 Mar; 22(1):101. doi:
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Microbiology (Reading, England).
2021 03; 167(3):. doi:
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European journal of medicinal chemistry.
2021 Feb; 212(?):113125. doi:
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Current biology : CB.
2021 02; 31(3):591-600.e4. doi:
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mSphere.
2021 02; 6(1):. doi:
10.1128/msphere.00927-20
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The Plant journal : for cell and molecular biology.
2021 02; 105(3):565-579. doi:
10.1111/tpj.15098
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International journal of molecular sciences.
2021 Jan; 22(1):. doi:
10.3390/ijms22010468
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Molecular ecology.
2021 01; 30(1):222-236. doi:
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Methods in molecular biology (Clifton, N.J.).
2021; 2250(?):219-238. doi:
10.1007/978-1-0716-1134-0_21
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Methods in molecular biology (Clifton, N.J.).
2021; 2198(?):209-216. doi:
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Genome biology and evolution.
2020 12; 12(12):2467-2485. doi:
10.1093/gbe/evaa229
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Trends in genetics : TIG.
2020 12; 36(12):899-901. doi:
10.1016/j.tig.2020.09.001
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The New phytologist.
2020 11; 228(3):1107-1114. doi:
10.1111/nph.16753
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Pediatric transplantation.
2020 11; 24(7):e13769. doi:
10.1111/petr.13769
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The plant genome.
2020 11; 13(3):e20049. doi:
10.1002/tpg2.20049
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Scientific reports.
2020 10; 10(1):16824. doi:
10.1038/s41598-020-73966-5
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Toxicology letters.
2020 Oct; 331(?):235-241. doi:
10.1016/j.toxlet.2020.06.010
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Genome research.
2020 10; 30(10):1449-1457. doi:
10.1101/gr.263863.120
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