alpha-D-Arabinofuranose (BioDeep_00000838774)
代谢物信息卡片
化学式: C5H10O5 (150.0528)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C(C1C(C(C(O1)O)O)O)O
InChI: InChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4+,5+/m1/s1
描述信息
A D-arabinofuranose that has alpha-configuration at the anomeric carbon.
同义名列表
1 个代谢物同义名
数据库引用编号
5 个数据库交叉引用编号
- ChEBI: CHEBI:145590
- PubChem: 9996708
- DrugBank: DB01936
- CAS: 37388-49-1
- MetaboLights: MTBLC145590
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
亚细胞结构定位 | 关联基因列表 |
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文献列表
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. [PMID: 21763720] - Tomoyuki Konishi, Tsutomu Aohara, Tomohiro Igasaki, Noriko Hayashi, Yasumasa Miyazaki, Akira Takahashi, Hirohiko Hirochika, Hiroaki Iwai, Shinobu Satoh, Tadashi Ishii. Down-regulation of UDP-arabinopyranose mutase reduces the proportion of arabinofuranose present in rice cell walls.
Phytochemistry.
2011 Nov; 72(16):1962-8. doi:
10.1016/j.phytochem.2011.07.012
. [PMID: 21824632] - Suomeng Dong, Weixiao Yin, Guanghui Kong, Xinyu Yang, Dinah Qutob, Qinghe Chen, Shiv D Kale, Yangyang Sui, Zhengguang Zhang, Daolong Dou, Xiaobo Zheng, Mark Gijzen, Brett M Tyler, Yuanchao Wang. Phytophthora sojae avirulence effector Avr3b is a secreted NADH and ADP-ribose pyrophosphorylase that modulates plant immunity.
PLoS pathogens.
2011 Nov; 7(11):e1002353. doi:
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. [PMID: 22102810] - Arun K Mishra, Nicole N Driessen, Ben J Appelmelk, Gurdyal S Besra. Lipoarabinomannan and related glycoconjugates: structure, biogenesis and role in Mycobacterium tuberculosis physiology and host-pathogen interaction.
FEMS microbiology reviews.
2011 Nov; 35(6):1126-57. doi:
10.1111/j.1574-6976.2011.00276.x
. [PMID: 21521247] - Isabel Bondia-Pons, Emilia Nordlund, Ismo Mattila, Kati Katina, Anna-Marja Aura, Marjukka Kolehmainen, Matej Orešič, Hannu Mykkänen, Kaisa Poutanen. Postprandial differences in the plasma metabolome of healthy Finnish subjects after intake of a sourdough fermented endosperm rye bread versus white wheat bread.
Nutrition journal.
2011 Oct; 10(?):116. doi:
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. [PMID: 22011443] - Diana V Dugas, Marcela K Monaco, Andrew Olsen, Robert R Klein, Sunita Kumari, Doreen Ware, Patricia E Klein. Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid.
BMC genomics.
2011 Oct; 12(?):514. doi:
10.1186/1471-2164-12-514
. [PMID: 22008187] - Benjamin A Hall, Judith P Armitage, Mark S P Sansom. Transmembrane helix dynamics of bacterial chemoreceptors supports a piston model of signalling.
PLoS computational biology.
2011 Oct; 7(10):e1002204. doi:
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. [PMID: 22028633] - Francisco J Fernandez, Fernando Garces, Miguel López-Estepa, Juan Aguilar, Laura Baldomà, Miquel Coll, Josefa Badia, M Cristina Vega. The UlaG protein family defines novel structural and functional motifs grafted on an ancient RNase fold.
BMC evolutionary biology.
2011 Sep; 11(?):273. doi:
10.1186/1471-2148-11-273
. [PMID: 21943130] - Päivi Mäki-Arvela, Tapio Salmi, Bjarne Holmbom, Stefan Willför, Dmitry Yu Murzin. Synthesis of sugars by hydrolysis of hemicelluloses--a review.
Chemical reviews.
2011 Sep; 111(9):5638-66. doi:
10.1021/cr2000042
. [PMID: 21682343] - Wing-Hang Tong, Carole Sourbier, Gennady Kovtunovych, Suh Young Jeong, Manish Vira, Manik Ghosh, Vladimir Valera Romero, Rachid Sougrat, Sophie Vaulont, Benoit Viollet, Yeong-Sang Kim, Sunmin Lee, Jane Trepel, Ramaprasad Srinivasan, Gennady Bratslavsky, Youfeng Yang, W Marston Linehan, Tracey A Rouault. The glycolytic shift in fumarate-hydratase-deficient kidney cancer lowers AMPK levels, increases anabolic propensities and lowers cellular iron levels.
Cancer cell.
2011 Sep; 20(3):315-27. doi:
10.1016/j.ccr.2011.07.018
. [PMID: 21907923] - Thomas Mueller, Wieland Voigt. Fermented wheat germ extract--nutritional supplement or anticancer drug?.
Nutrition journal.
2011 Sep; 10(?):89. doi:
10.1186/1475-2891-10-89
. [PMID: 21892933] - Joost van den Brink, Ronald P de Vries. Fungal enzyme sets for plant polysaccharide degradation.
Applied microbiology and biotechnology.
2011 Sep; 91(6):1477-92. doi:
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. [PMID: 21785931] - Kozue Anzai, Tomoyasu Sugiyama, Mayuko Sukisaki, Yayoi Sakiyama, Misa Otoguro, Katsuhiko Ando. Flexivirga alba gen. nov., sp. nov., an actinobacterial taxon in the family Dermacoccaceae.
The Journal of antibiotics.
2011 Sep; 64(9):613-6. doi:
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. [PMID: 21811262] - Onuma Kaewkla, Christopher M M Franco. Flindersiella endophytica gen. nov., sp. nov., an endophytic actinobacterium isolated from the root of Grey Box, an endemic eucalyptus tree.
International journal of systematic and evolutionary microbiology.
2011 Sep; 61(Pt 9):2135-2140. doi:
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. [PMID: 20889769] - Hong Cao, Siyi Guo, Yunyuan Xu, Kun Jiang, Alan M Jones, Kang Chong. Reduced expression of a gene encoding a Golgi localized monosaccharide transporter (OsGMST1) confers hypersensitivity to salt in rice (Oryza sativa).
Journal of experimental botany.
2011 Aug; 62(13):4595-604. doi:
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. [PMID: 21613379] - Robert J Carman, Adam L Stevens, Matthew W Lyerly, Megan F Hiltonsmith, Bradley G Stiles, Tracy D Wilkins. Clostridium difficile binary toxin (CDT) and diarrhea.
Anaerobe.
2011 Aug; 17(4):161-5. doi:
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. [PMID: 21376825] - Annalisa Stilla, Simone Di Paola, Nadia Dani, Christian Krebs, Antonella Arrizza, Daniela Corda, Friedrich Haag, Friederich Koch-Nolte, Maria Di Girolamo. Characterisation of a novel glycosylphosphatidylinositol-anchored mono-ADP-ribosyltransferase isoform in ovary cells.
European journal of cell biology.
2011 Aug; 90(8):665-77. doi:
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. [PMID: 21616557] - Friederike Teichert, Swantje Winkler, Hector C Keun, William P Steward, Andreas J Gescher, Peter B Farmer, Rajinder Singh. Evaluation of urinary ribonucleoside profiling for clinical biomarker discovery using constant neutral loss scanning liquid chromatography/tandem mass spectrometry.
Rapid communications in mass spectrometry : RCM.
2011 Jul; 25(14):2071-82. doi:
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. [PMID: 21698690] - Oliver Spadiut, Farid M Ibatullin, Jonelle Peart, Fredrika Gullfot, Carlos Martinez-Fleites, Marcus Ruda, Chunlin Xu, Gustav Sundqvist, Gideon J Davies, Harry Brumer. Building custom polysaccharides in vitro with an efficient, broad-specificity xyloglucan glycosynthase and a fucosyltransferase.
Journal of the American Chemical Society.
2011 Jul; 133(28):10892-900. doi:
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. [PMID: 21618981] - Carine Chevrier, Didier Le Nouën, Albert Defoin, Céline Tarnus. Synthesis of 4-amino-4,5-dideoxy-L-lyxofuranose derivatives and their evaluation as fucosidase inhibitors.
Carbohydrate research.
2011 Jul; 346(10):1202-11. doi:
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. [PMID: 21550024] - Heike Riegler, Claudia Geserick, Rita Zrenner. Arabidopsis thaliana nucleosidase mutants provide new insights into nucleoside degradation.
The New phytologist.
2011 Jul; 191(2):349-359. doi:
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. [PMID: 21599668] - James D McCluskey, Dmytro Sava, Stephen C Harbison, Carlos A Muro-Cacho, Johnson T Giffe, Xu Ping, Raymond D Harbison. Hepatoprotective effects of select water-soluble PARP inhibitors in a carbon tetrachloride model.
International journal of critical illness and injury science.
2011 Jul; 1(2):97-103. doi:
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. [PMID: 22229131] - Byron M Berenger, Jay Hamill, Danuta Stack, Elisha Montgomery, Shaunna M Huston, Martina Timm-McCann, Slava Epelman, Christopher H Mody. Membrane CD14, but not soluble CD14, is used by exoenzyme S from P. aeruginosa to signal proinflammatory cytokine production.
Journal of leukocyte biology.
2011 Jul; 90(1):189-98. doi:
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. [PMID: 21498585] - Márcia A S Correia, Koushik Mazumder, Joana L A Brás, Susan J Firbank, Yanping Zhu, Richard J Lewis, William S York, Carlos M G A Fontes, Harry J Gilbert. Structure and function of an arabinoxylan-specific xylanase.
The Journal of biological chemistry.
2011 Jun; 286(25):22510-20. doi:
10.1074/jbc.m110.217315
. [PMID: 21378160] - M P Lim, L A Devi, R Rozenfeld. Cannabidiol causes activated hepatic stellate cell death through a mechanism of endoplasmic reticulum stress-induced apoptosis.
Cell death & disease.
2011 Jun; 2(?):e170. doi:
10.1038/cddis.2011.52
. [PMID: 21654828] - Elena Synesiou, Lynnette D Fairbanks, H Anne Simmonds, Ewa M Slominska, Ryszard T Smolenski, Elizabeth A Carrey. 4-Pyridone-3-carboxamide-1-β-D-ribonucleoside triphosphate (4PyTP), a novel NAD metabolite accumulating in erythrocytes of uremic children: a biomarker for a toxic NAD analogue in other tissues?.
Toxins.
2011 06; 3(6):520-37. doi:
10.3390/toxins3060520
. [PMID: 22069723] - Yong Li, Tao Pang, Yanli Li, Xiaolin Wang, Qinghua Li, Xin Lu, Guowang Xu. Gas chromatography-mass spectrometric method for metabolic profiling of tobacco leaves.
Journal of separation science.
2011 Jun; 34(12):1447-54. doi:
10.1002/jssc.201100106
. [PMID: 21560246] - Hai Wang, Qin Liang, Kaiming Cao, Xiaochun Ge. Endogenous protein mono-ADP-ribosylation in Arabidopsis thaliana.
Planta.
2011 Jun; 233(6):1287-92. doi:
10.1007/s00425-011-1415-y
. [PMID: 21519881] - Dennis Verzijl, Ad P Ijzerman. Functional selectivity of adenosine receptor ligands.
Purinergic signalling.
2011 Jun; 7(2):171-92. doi:
10.1007/s11302-011-9232-0
. [PMID: 21544511] - Guo-Zhen Zhao, Jie Li, Hai-Yu Huang, Wen-Yong Zhu, Li-Xing Zhao, Shu-Kun Tang, Li-Hua Xu, Wen-Jun Li. Pseudonocardia artemisiae sp. nov., isolated from surface-sterilized Artemisia annua L.
International journal of systematic and evolutionary microbiology.
2011 May; 61(Pt 5):1061-1065. doi:
10.1099/ijs.0.021931-0
. [PMID: 20511456] - Qing-Yi Xie, Cheng Wang, Rong Wang, Zhi Qu, Hai-Peng Lin, Michael Goodfellow, Kui Hong. Jishengella endophytica gen. nov., sp. nov., a new member of the family Micromonosporaceae.
International journal of systematic and evolutionary microbiology.
2011 May; 61(Pt 5):1153-1159. doi:
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. [PMID: 20543149] - Ulla Mueller, Tanja Sauer, Ingrid Weigel, Rohtraud Pichner, Monika Pischetsrieder. Identification of H₂O₂ as a major antimicrobial component in coffee.
Food & function.
2011 May; 2(5):265-72. doi:
10.1039/c0fo00180e
. [PMID: 21779565] - Alan Cartmell, Lauren S McKee, Maria J Peña, Johan Larsbrink, Harry Brumer, Satoshi Kaneko, Hitomi Ichinose, Richard J Lewis, Anders Viksø-Nielsen, Harry J Gilbert, Jon Marles-Wright. The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases.
The Journal of biological chemistry.
2011 Apr; 286(17):15483-95. doi:
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. [PMID: 21339299] - Thomas Mueller, Karin Jordan, Wieland Voigt. Promising cytotoxic activity profile of fermented wheat germ extract (Avemar®) in human cancer cell lines.
Journal of experimental & clinical cancer research : CR.
2011 Apr; 30(?):42. doi:
10.1186/1756-9966-30-42
. [PMID: 21496306] - Michael J Bowman, Bruce S Dien, Patricia J O'Bryan, Gautam Sarath, Michael A Cotta. Selective chemical oxidation and depolymerization of switchgrass [corrected] (Panicum virgatum L.) xylan with [corrected] oligosaccharide product analysis by mass spectrometry.
Rapid communications in mass spectrometry : RCM.
2011 Apr; 25(7):941-50. doi:
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