alpha-L-Fucopyranose (BioDeep_00000015265)

 

Secondary id: BioDeep_00000624725


代谢物信息卡片


(3S,4R,5S,6S)-6-METHYLTETRAHYDRO-2H-PYRAN-2,3,4,5-TETRAOL

化学式: C6H12O5 (164.0685)
中文名称: L(-)-岩藻糖
谱图信息: 最多检出来源 Macaca mulatta(lipidsearch) 16.2%

分子结构信息

SMILES: CC1C(C(C(C(O1)O)O)O)O
InChI: InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1

描述信息

COVID info from PDB, Protein Data Bank
Corona-virus
Coronavirus
SARS-CoV-2
COVID-19
SARS-CoV
COVID19
SARS2
SARS

同义名列表

2 个代谢物同义名

(3S,4R,5S,6S)-6-METHYLTETRAHYDRO-2H-PYRAN-2,3,4,5-TETRAOL; alpha-L-Fucopyranose



数据库引用编号

9 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(6)

BioCyc(2)

PlantCyc(0)

代谢反应

62 个相关的代谢反应过程信息。

Reactome(42)

BioCyc(17)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(2)

COVID-19 Disease Map(0)

PathBank(1)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表


文献列表

  • Celeste A Roney, Biying Xu, Jianwu Xie, Shuai Yuan, Jeremiah Wierwille, Chao-Wei Chen, Yu Chen, Gary L Griffiths, Ronald M Summers. Rh-I-UEA-1 polymerized liposomes target and image adenomatous polyps in the APC(Min/+) mouse using optical colonography. Molecular imaging. 2011 Aug; 10(4):305-16. doi: 10.2310/7290.2010.00054. [PMID: 21521550]
  • Jacek Golański, Marta Michalska, Joanna Polowinczak-Przybyłek, Urszula Krajewska, Cezary Watała. Can we extrapolate the outcomes of in vitro studies on murine endothelium to studies of human platelet-endothelium interactions? A technical note. Archives of medical science : AMS. 2011 Feb; 7(1):34-7. doi: 10.5114/aoms.2011.20601. [PMID: 22291730]
  • KeXin Li, Xiuli Zhao, Shiyi Xu, DaHai Pang, ChunRong Yang, DaWei Chen. Application of Ulex europaeus agglutinin I-modified liposomes for oral vaccine: Ex Vivo bioadhesion and in Vivo immunity. Chemical & pharmaceutical bulletin. 2011; 59(5):618-23. doi: 10.1248/cpb.59.618. [PMID: 21532200]
  • Prem N Gupta, Suresh P Vyas. Investigation of lectinized liposomes as M-cell targeted carrier-adjuvant for mucosal immunization. Colloids and surfaces. B, Biointerfaces. 2011 Jan; 82(1):118-25. doi: 10.1016/j.colsurfb.2010.08.027. [PMID: 20843665]
  • Neeraj Mishra, Shailja Tiwari, Bhuvaneshwar Vaidya, Govind P Agrawal, Suresh P Vyas. Lectin anchored PLGA nanoparticles for oral mucosal immunization against hepatitis B. Journal of drug targeting. 2011 Jan; 19(1):67-78. doi: 10.3109/10611861003733946. [PMID: 20334603]
  • Maria I Bilan, Alexey A Grachev, Alexander S Shashkov, Maeve Kelly, Craig J Sanderson, Nikolay E Nifantiev, Anatolii I Usov. Further studies on the composition and structure of a fucoidan preparation from the brown alga Saccharina latissima. Carbohydrate research. 2010 Sep; 345(14):2038-47. doi: 10.1016/j.carres.2010.07.009. [PMID: 20701899]
  • Ravneet K Grewal, Akhtar Mahmood. The effects of ethanol administration on brush border membrane glycolipids in rat intestine. Alcohol (Fayetteville, N.Y.). 2010 Sep; 44(6):515-22. doi: 10.1016/j.alcohol.2010.07.008. [PMID: 20708369]
  • José M Albuquerque-Cunha, Marcelo S Gonzalez, Elói S Garcia, Cícero B Mello, Patrícia Azambuja, João C A Almeida, Wanderley de Souza, Nadir F S Nogueira. Cytochemical characterization of microvillar and perimicrovillar membranes in the posterior midgut epithelium of Rhodnius prolixus. Arthropod structure & development. 2009 Jan; 38(1):31-44. doi: 10.1016/j.asd.2008.06.001. [PMID: 18602023]
  • Verena E Plattner, Maria Wagner, Gerda Ratzinger, Franz Gabor, Michael Wirth. Targeted drug delivery: binding and uptake of plant lectins using human 5637 bladder cancer cells. European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V. 2008 Oct; 70(2):572-6. doi: 10.1016/j.ejpb.2008.06.004. [PMID: 18602465]
  • Maria E Pasini, Jari Intra, Giulio Pavesi. Expression study of an alpha-l-fucosidase gene in the Drosophilidae family. Gene. 2008 Aug; 420(1):23-33. doi: 10.1016/j.gene.2008.04.021. [PMID: 18556148]
  • Fushi Wen, Rhodesia M Celoy, Trang Nguyen, Weiqing Zeng, Kenneth Keegstra, Peter Immerzeel, Markus Pauly, Martha C Hawes. Inducible expression of Pisum sativum xyloglucan fucosyltransferase in the pea root cap meristem, and effects of antisense mRNA expression on root cap cell wall structural integrity. Plant cell reports. 2008 Jul; 27(7):1125-35. doi: 10.1007/s00299-008-0530-0. [PMID: 18347802]
  • Jari Intra, Federica Cenni, Maria-Elisa Perotti. An alpha-L-fucosidase potentially involved in fertilization is present on Drosophila spermatozoa surface. Molecular reproduction and development. 2006 Sep; 73(9):1149-58. doi: 10.1002/mrd.20425. [PMID: 16736526]
  • S Georgiou, E Pasmatzi, A Monastirli, T Sakkis, S Alachioti, D Tsambaos. Age-related alterations in the carbohydrate residue composition of the cell surface in the unexposed normal human epidermis. Gerontology. 2005 May; 51(3):155-60. doi: 10.1159/000083986. [PMID: 15832040]
  • Daisuke Nagaoka, Azuma Tsukise, Wilfried Meyer, Yoshifumi Hirabayashi. Ultracytochemical demonstration of glycoproteins in the canine knee synovium. Annals of anatomy = Anatomischer Anzeiger : official organ of the Anatomische Gesellschaft. 2003 Dec; 185(6):555-64. doi: 10.1016/s0940-9602(03)80126-7. [PMID: 14704001]
  • Imelda Lambkin, Clemencia Pinilla, Christa Hamashin, Lisa Spindler, Shannon Russell, Amy Schink, Rosa Moya-Castro, Gina Allicotti, Lisa Higgins, Melanie Smith, Jackie Dee, Carolyn Wilson, Richard Houghten, Daniel O'Mahony. Toward targeted oral vaccine delivery systems: selection of lectin mimetics from combinatorial libraries. Pharmaceutical research. 2003 Aug; 20(8):1258-66. doi: 10.1023/a:1025061317400. [PMID: 12948024]
  • Tadashi Yasui, Azuma Tsukise, Wilfried Meyer. Histochemical analysis of glycoconjugates in the ceruminous glands of the North American raccoon (Procyon lotor). Annals of anatomy = Anatomischer Anzeiger : official organ of the Anatomische Gesellschaft. 2003 Jun; 185(3):223-31. doi: 10.1016/s0940-9602(03)80028-6. [PMID: 12801086]
  • Mario A Bianchet, Eric W Odom, Gerardo R Vasta, L Mario Amzel. A novel fucose recognition fold involved in innate immunity. Nature structural biology. 2002 Aug; 9(8):628-34. doi: 10.1038/nsb817. [PMID: 12091873]
  • E Sgambati, R Biagiotti, M Marini, E Brizzi. Lectin histochemistry in the human placenta of pregnancies complicated by intrauterine growth retardation based on absent or reversed diastolic flow. Placenta. 2002 Jul; 23(6):503-15. doi: 10.1053/plac.2002.0793. [PMID: 12137749]
  • Anthony P Moran, Yuriy A Knirel, Sof'ya N Senchenkova, Goran Widmalm, Sean O Hynes, Per-Erik Jansson. Phenotypic variation in molecular mimicry between Helicobacter pylori lipopolysaccharides and human gastric epithelial cell surface glycoforms. Acid-induced phase variation in Lewis(x) and Lewis(y) expression by H. Pylori lipopolysaccharides. The Journal of biological chemistry. 2002 Feb; 277(8):5785-95. doi: 10.1074/jbc.m108574200. [PMID: 11741906]
  • M A Clark, H Blair, L Liang, R N Brey, D Brayden, B H Hirst. Targeting polymerised liposome vaccine carriers to intestinal M cells. Vaccine. 2001 Oct; 20(1-2):208-17. doi: 10.1016/s0264-410x(01)00258-4. [PMID: 11567766]
  • M Ishii, A Tsukise, W Meyer. Lectin histochemistry of glycoconjugates in the feline hair follicle and hair. Annals of anatomy = Anatomischer Anzeiger : official organ of the Anatomische Gesellschaft. 2001 Sep; 183(5):449-58. doi: 10.1016/s0940-9602(01)80203-x. [PMID: 11677811]
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