Hydroxide (BioDeep_00000014391)

 

Secondary id: BioDeep_00001868725

human metabolite Endogenous


代谢物信息卡片


Hydridooxygenate(1-)

化学式: HO- (17.0027396)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: [OH-]
InChI: InChI=1S/H2O/h1H2/p-1

描述信息

In chemistry, hydroxide is the most common name for the diatomic anion OH, consisting of oxygen and hydrogen atoms, usually derived from the dissociation of a base. It is one of the simplest diatomic ions known. Hydroxide ion is a kind of ligand. It donates one pair of electrons, behaving as a Lewis base. Examples include the aluminate ion [Al(OH)4]- and aurate ion [Au(OH)4]-. [HMDB]
In chemistry, hydroxide is the most common name for the diatomic anion OH, consisting of oxygen and hydrogen atoms, usually derived from the dissociation of a base. It is one of the simplest diatomic ions known. Hydroxide ion is a kind of ligand. It donates one pair of electrons, behaving as a Lewis base. Examples include the aluminate ion [Al(OH)4]- and aurate ion [Au(OH)4]-.

同义名列表

21 个代谢物同义名

Hydridooxygenate(1-); Hydroxyl ion (OH1-); Hydroxide ion(1-); Hydroxyl radicals; Oxygen ion (O1-); Hydroxyl radical; Hydroxide anion; Hydroxyl anion; Hydrogen oxide; Hydroxide(1-); HYDROXIDE ion; Water ion(1-); Hydroxy anion; Hydroxyl ion; Hydroxy ion; Oxidanide; Hydroxide; Hydroxyl; Hydroxy; OH(-); OH



数据库引用编号

13 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(7)

BioCyc(6)

PlantCyc(1)

代谢反应

293 个相关的代谢反应过程信息。

Reactome(48)

BioCyc(20)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(222)

COVID-19 Disease Map(1)

PathBank(2)

  • Selenium Metabolism: Adenosine triphosphate + hydrogen selenide ion ⟶ Adenosine monophosphate + Phosphate + Selenophosphate
  • Selenium Metabolism: Adenosine triphosphate + hydrogen selenide ion ⟶ Adenosine monophosphate + Phosphate + Selenophosphate

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。



文献列表

  • Samaneh Torbati, Parisa Yekan Motlagh, Alireza Khataee. Toxicity of ZnFe-SO4 layered double hydroxide in Tetradesmus obliquus and evaluation of some physiological responses of the microalgae for stress management. Scientific reports. 2024 01; 14(1):975. doi: 10.1038/s41598-023-51042-y. [PMID: 38200201]
  • Guoxin Jing, Linnan Yang, Hong Wang, Jintong Niu, Huichao Wang, Yi Gao, Youyuan Li, Bangguo Wei, Yechang Qian, Shilong Wang. Blocked Autophagy is Involved in Layered Double Hydroxide-Induced Repolarization and Immune Activation in Tumor-Associated Macrophages. Advanced healthcare materials. 2023 12; 12(30):e2301471. doi: 10.1002/adhm.202301471. [PMID: 37549006]
  • Hongyang Wu, Xiaoyang Wan, Jiefei Niu, Huimin Xu, Yu Zhang, Xian Xue, Yang Li, Qiang Li, Tao Lu, Hongjun Yu, Weijie Jiang. Enhancing lettuce yield via Cu/Fe-layered double hydroxide nanoparticles spraying. Journal of nanobiotechnology. 2023 Nov; 21(1):417. doi: 10.1186/s12951-023-02178-6. [PMID: 37950234]
  • Caiyou Ding, Jiongxin Wu, Yuan Liu, Xinxin Sheng, Xiaoling Cheng, Xiaoyan Xiong, Wenlin Zhao. A Waterborne Epoxy Composite Coating with Smart Corrosion Resistance Based on 2-Phenylbenzimidazole-5-sulfonic Acid/Layered Double Hydroxide Composite. Molecules (Basel, Switzerland). 2023 Jul; 28(13):. doi: 10.3390/molecules28135199. [PMID: 37446859]
  • Xavier Benadict Joseph, Jeena N Baby, Sea-Fue Wang, Mary George. Emerging carbonate anion intercalated- ZnCr-layered double hydroxide/vanadium carbide nanocomposite: Sustainable design strategies based on disposal electrochemical sensor for diethofencarb fungicide monitoring. Chemosphere. 2023 Jun; ?(?):139099. doi: 10.1016/j.chemosphere.2023.139099. [PMID: 37270040]
  • Javad Shirazi, Sonia Jafari, Ulf Ryde, Mehdi Irani. Catalytic Reaction Mechanism of Glyoxalase II: A Quantum Mechanics/Molecular Mechanics Study. The journal of physical chemistry. B. 2023 May; 127(20):4480-4495. doi: 10.1021/acs.jpcb.3c01495. [PMID: 37191640]
  • Bin Liu, Yanlan Wang, Na Du. Interactions between Layered Double Hydroxide Nanoparticles and Egg Yolk Lecithin Liposome Membranes. Molecules (Basel, Switzerland). 2023 May; 28(9):. doi: 10.3390/molecules28093929. [PMID: 37175337]
  • Haohao Bian, Minyan Wang, Jialin Han, Xiaopiao Hu, Honglei Xia, Lei Wang, Chaochu Fang, Cheng Shen, Yu Bon Man, Ming Hung Wong, Shengdao Shan, Jin Zhang. MgFe-LDH@biochars for removing ammonia nitrogen and phosphorus from biogas slurry: Synthesis routes, composite performance, and adsorption mechanisms. Chemosphere. 2023 May; 324(?):138333. doi: 10.1016/j.chemosphere.2023.138333. [PMID: 36889475]
  • Jiaxi Yong, Miaomiao Wu, Run Zhang, Shengnan Bi, Christopher W G Mann, Neena Mitter, Bernard J Carroll, Zhi Ping Xu. Clay nanoparticles efficiently deliver small interfering RNA to intact plant leaf cells. Plant physiology. 2022 11; 190(4):2187-2202. doi: 10.1093/plphys/kiac430. [PMID: 36135825]
  • Wenxian Gou, Wei Li, Matthew G Siebecker, Mengqiang Zhu, Ling Li, Donald L Sparks. Coupling Molecular-Scale Spectroscopy with Stable Isotope Analyses to Investigate the Effect of Si on the Mechanisms of Zn-Al LDH Formation on Al Oxide. Environmental science & technology. 2022 10; 56(19):13829-13836. doi: 10.1021/acs.est.2c05140. [PMID: 36135962]
  • Chieh-Tsung Lo, Yi-Shan Wu, Sheng-Min Huang, Pei-Jung Tsai, Chien-Liang Lee. Carbon fibre-supported hierarchical NiCo layered double hydroxide nanosheets as non-enzymatic glucose sensors for sport drinks and serum. Food chemistry. 2022 Jul; 383(?):132383. doi: 10.1016/j.foodchem.2022.132383. [PMID: 35176717]
  • Luyao Zhang, Gaoming Li, Zhijun Ouyang, Rui Yang, Yue Gao, Xueyan Cao, István Bányai, Xiangyang Shi, Rui Guo. Intelligent design of iron-doped LDH nanosheets for cooperative chemo-chemodynamic therapy of tumors. Biomaterials science. 2022 Apr; 10(8):2029-2039. doi: 10.1039/d2bm00102k. [PMID: 35302125]
  • Samina Rubnawaz, Waqas Khan Kayani, Nosheen Akhtar, Rashid Mahmood, Asif Khan, Mohammad K Okla, Saud A Alamri, Ibrahim A Alaraidh, Yasmeen A Alwasel, Bushra Mirza. Polyphenol Rich Ajuga bracteosa Transgenic Regenerants Display Better Pharmacological Potential. Molecules (Basel, Switzerland). 2021 08; 26(16):. doi: 10.3390/molecules26164874. [PMID: 34443462]
  • S Taniselass, Mohd Khairuddin Md Arshad, Subash C B Gopinath, M F M Fathil, C Ibau, Periasamy Anbu. Impedimetric cardiac biomarker determination in serum mediated by epoxy and hydroxyl of reduced graphene oxide on gold array microelectrodes. Mikrochimica acta. 2021 07; 188(8):257. doi: 10.1007/s00604-021-04922-x. [PMID: 34268634]
  • Ahmed A G El-Shahawy, Adel Abdel-Moneim, Abdelazim S M Ebeid, Zienab E Eldin, Mohamed I Zanaty. A novel layered double hydroxide-hesperidin nanoparticles exert antidiabetic, antioxidant and anti-inflammatory effects in rats with diabetes. Molecular biology reports. 2021 Jun; 48(6):5217-5232. doi: 10.1007/s11033-021-06527-2. [PMID: 34244888]
  • Junichi Ono, Minori Imai, Yoshifumi Nishimura, Hiromi Nakai. Hydroxide Ion Carrier for Proton Pumps in Bacteriorhodopsin: Primary Proton Transfer. The journal of physical chemistry. B. 2020 10; 124(39):8524-8539. doi: 10.1021/acs.jpcb.0c05507. [PMID: 32877195]
  • Lu Zhang, Wen-Na Zhou, Zong-Cai Tu, Si-Hang Yang, Liang Xu, Tao Yuan. Influence of Hydroxyl Substitution on the Suppression of Flavonol in Harmful Glycation Product Formation and the Inhibition Mechanism Revealed by Spectroscopy and Mass Spectrometry. Journal of agricultural and food chemistry. 2020 Aug; 68(31):8263-8273. doi: 10.1021/acs.jafc.0c03163. [PMID: 32662984]
  • Rubén Seoane-Rivero, Estibaliz Ruiz-Bilbao, Rodrigo Navarro, José Manuel Laza, José María Cuevas, Beñat Artetxe, Juan M Gutiérrez-Zorrilla, José Luis Vilas-Vilela, Ángel Marcos-Fernandez. Structural Characterization of Mono and Dihydroxylated Umbelliferone Derivatives. Molecules (Basel, Switzerland). 2020 Jul; 25(15):. doi: 10.3390/molecules25153497. [PMID: 32751979]
  • Cecilia Vasti, Ernesto Ambroggio, Ricardo Rojas, Carla E Giacomelli. A closer look into the physical interactions between lipid membranes and layered double hydroxide nanoparticles. Colloids and surfaces. B, Biointerfaces. 2020 Jul; 191(?):110998. doi: 10.1016/j.colsurfb.2020.110998. [PMID: 32244154]
  • Justin Phillips, Jaco-Louis Venter, Maria Atanasova, James Wesley-Smith, Hester Oosthuizen, M Naushad Emmambux, Elizabeth L Du Toit, Walter W Focke. Dextrin Nanocomposites as Matrices for Solid Dosage Forms. ACS applied materials & interfaces. 2020 Apr; 12(14):16969-16977. doi: 10.1021/acsami.0c02061. [PMID: 32191427]
  • Yang Yu, Guido F Pauli, Lingyi Huang, Li-She Gan, Richard B van Breemen, Dianpeng Li, James B McAlpine, David C Lankin, Shao-Nong Chen. Classification of Flavonoid Metabolomes via Data Mining and Quantification of Hydroxyl NMR Signals. Analytical chemistry. 2020 04; 92(7):4954-4962. doi: 10.1021/acs.analchem.9b05084. [PMID: 32108467]
  • Peter Olsén, Natalia Herrera, Lars A Berglund. Polymer Grafting Inside Wood Cellulose Fibers by Improved Hydroxyl Accessibility from Fiber Swelling. Biomacromolecules. 2020 02; 21(2):597-603. doi: 10.1021/acs.biomac.9b01333. [PMID: 31769663]
  • Yulin Xiang, Furen Kang, Yuxiu Xiang, Yurong Jiao. Effects of humic acid-modified magnetic Fe3O4/MgAl-layered double hydroxide on the plant growth, soil enzyme activity, and metal availability. Ecotoxicology and environmental safety. 2019 Oct; 182(?):109424. doi: 10.1016/j.ecoenv.2019.109424. [PMID: 31299478]
  • Shafinaz Abd Gani, Suleiman Alhaji Muhammad, Aminu Umar Kura, Farahnaz Barahuie, Mohd Zobir Hussein, Sharida Fakurazi. Effect of protocatechuic acid-layered double hydroxide nanoparticles on diethylnitrosamine/phenobarbital-induced hepatocellular carcinoma in mice. PloS one. 2019; 14(5):e0217009. doi: 10.1371/journal.pone.0217009. [PMID: 31141523]
  • Gao-Juan Cao, Yingmei Chen, Xiaohe Chen, Peilin Weng, Rong-Guang Lin. Intrinsic catalytic activity of rhodium nanoparticles with respect to reactive oxygen species scavenging: implication for diminishing cytotoxicity. Journal of environmental science and health. Part C, Environmental carcinogenesis & ecotoxicology reviews. 2019; 37(1):14-25. doi: 10.1080/10590501.2019.1555319. [PMID: 30601677]
  • Poonam Subhash Jaiswal, Nishu Mittal, Gursharn Singh Randhawa. Cyamopsis tetragonoloba type 1 metallothionein (CtMT1) gene is upregulated under drought stress and its protein product has an additional C-X-C motif and unique metal binding pattern. International journal of biological macromolecules. 2018 Nov; 119(?):1324-1334. doi: 10.1016/j.ijbiomac.2018.08.027. [PMID: 30098366]
  • Jinzhi Ni, Joseph J Pignatello. Charge-assisted hydrogen bonding as a cohesive force in soil organic matter: water solubility enhancement by addition of simple carboxylic acids. Environmental science. Processes & impacts. 2018 Sep; 20(9):1225-1233. doi: 10.1039/c8em00255j. [PMID: 30084855]
  • Tzu-Yen Yang, Mei-Li Wu, Chi-I Chang, Chih-I Liu, Te-Chih Cheng, Yu-Jen Wu. Bornyl cis-4-Hydroxycinnamate Suppresses Cell Metastasis of Melanoma through FAK/PI3K/Akt/mTOR and MAPK Signaling Pathways and Inhibition of the Epithelial-to-Mesenchymal Transition. International journal of molecular sciences. 2018 Jul; 19(8):. doi: 10.3390/ijms19082152. [PMID: 30042328]
  • Marketa Absolonova, Mary J Beilby, Aniela Sommer, Marion C Hoepflinger, Ilse Foissner. Surface pH changes suggest a role for H+/OH- channels in salinity response of Chara australis. Protoplasma. 2018 May; 255(3):851-862. doi: 10.1007/s00709-017-1191-z. [PMID: 29247277]
  • Rongrong Zhu, Zhaoqi Wang, Peng Liang, Xiaolie He, Xizhen Zhuang, Ruiqi Huang, Mei Wang, Qigang Wang, Yechang Qian, Shilong Wang. Efficient VEGF targeting delivery of DOX using Bevacizumab conjugated SiO2@LDH for anti-neuroblastoma therapy. Acta biomaterialia. 2017 11; 63(?):163-180. doi: 10.1016/j.actbio.2017.09.009. [PMID: 28923539]
  • Baowei Hu, Feng Ye, Chengan Jin, Xiangxian Ma, Chengcai Huang, Guodong Sheng, Jingyuan Ma, Xiangke Wang, Yuying Huang. The enhancement roles of layered double hydroxide on the reductive immobilization of selenate by nanoscale zero valent iron: Macroscopic and microscopic approaches. Chemosphere. 2017 Oct; 184(?):408-416. doi: 10.1016/j.chemosphere.2017.05.179. [PMID: 28609747]
  • Burçin Ergene Öz, Gülçin Saltan İşcan, Esra Küpeli Akkol, İpek Süntar, Hikmet Keleş, Özlem Bahadır Acıkara. Wound healing and anti-inflammatory activity of some Ononis taxons. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 2017 Jul; 91(?):1096-1105. doi: 10.1016/j.biopha.2017.05.040. [PMID: 28531920]
  • Yu-Jun Wang, Ting-Ting Fan, Cun Liu, Wei Li, Meng-Qiang Zhu, Jian-Xin Fan, Hua Gong, Dong-Mei Zhou, Donald L Sparks. Macroscopic and microscopic investigation of adsorption and precipitation of Zn on γ-alumina in the absence and presence of As. Chemosphere. 2017 Jul; 178(?):309-316. doi: 10.1016/j.chemosphere.2017.03.061. [PMID: 28340456]
  • Ling Qiu, Jianguo Lin, Qingzhu Liu, Shanshan Wang, Gaochao Lv, Ke Li, Haiming Shi, Zhengkun Huang, Edward J Bertaccini. The Role of the Hydroxyl Group in Propofol-Protein Target Recognition: Insights from ONIOM Studies. The journal of physical chemistry. B. 2017 06; 121(24):5883-5896. doi: 10.1021/acs.jpcb.7b02079. [PMID: 28548837]
  • Qian Jiang, Xican Li, Yage Tian, Qiaoqi Lin, Hong Xie, Wenbiao Lu, Yuguang Chi, Dongfeng Chen. Lyophilized aqueous extracts of Mori Fructus and Mori Ramulus protect Mesenchymal stem cells from •OH-treated damage: bioassay and antioxidant mechanism. BMC complementary and alternative medicine. 2017 May; 17(1):242. doi: 10.1186/s12906-017-1730-3. [PMID: 28464859]
  • Ieva Vasiliauskaité-Brooks, Remy Sounier, Pascal Rochaix, Gaëtan Bellot, Mathieu Fortier, François Hoh, Luigi De Colibus, Chérine Bechara, Essa M Saied, Christoph Arenz, Cédric Leyrat, Sébastien Granier. Structural insights into adiponectin receptors suggest ceramidase activity. Nature. 2017 04; 544(7648):120-123. doi: 10.1038/nature21714. [PMID: 28329765]
  • Ningning Song, Yibing Ma. The toxicity of HCrO4- and CrO42- to barley root elongation in solution culture: pH effect and modelling. Chemosphere. 2017 Mar; 171(?):537-543. doi: 10.1016/j.chemosphere.2016.12.050. [PMID: 28039832]
  • Mina Yan, Chanzhen Yang, Binyao Huang, Zeqian Huang, Liangfeng Huang, Xuefei Zhang, Chunshun Zhao. Systemic toxicity induced by aggregated layered double hydroxide nanoparticles. International journal of nanomedicine. 2017; 12(?):7183-7195. doi: 10.2147/ijn.s146414. [PMID: 29042768]
  • Roberto Mioni, Alessandra Marega, Marco Lo Cicero, Domenico Montanaro. Old and new approaches to the interpretation of acid-base metabolism, starting from historical data applied to diabetic acidosis. Scandinavian journal of clinical and laboratory investigation. 2016 Nov; 76(7):520-543. doi: 10.1080/00365513.2016.1204660. [PMID: 27410514]
  • Samiyyah M Sledge, Hussain Khimji, Douglas Borchman, Alexandria L Oliver, Heidi Michael, Emily K Dennis, Dylan Gerlach, Rahul Bhola, Elsa Stephen. Evaporation and Hydrocarbon Chain Conformation of Surface Lipid Films. The ocular surface. 2016 10; 14(4):447-459. doi: 10.1016/j.jtos.2016.06.002. [PMID: 27395776]
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