D-Xylulose-5-phosphate (BioDeep_00000014383)

 

Secondary id: BioDeep_00001868983

human metabolite PANOMIX_OTCML-2023 Endogenous natural product


代谢物信息卡片


{[(2R,3S)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acid

化学式: C5H11O8P (230.0192)
中文名称: 5-磷酸木酮糖, D-木酮糖-5-磷酸, 木酮糖-5-磷酸酯
谱图信息: 最多检出来源 Homo sapiens(plant) 8.48%

Reviewed

Last reviewed on 2024-09-14.

Cite this Page

D-Xylulose-5-phosphate. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/d-xylulose-5-phosphate (retrieved 2025-03-14) (BioDeep RN: BioDeep_00000014383). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C(C(=O)[C@H]([C@@H](COP(=O)(O)O)O)O)O
InChI: InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)/t4-,5-/m1/s1

描述信息

Xylulose 5-phosphate (Xu-5-P) is a metabolite of the hexose monophosphate pathway that activates protein phosphatase 2A to mediate the acute effects of carbohydrate feeding on the glycolytic pathway, as well as the coordinate long-term control of the enzymes required for fatty acid and triglyceride synthesis. Xu-5-P is the signal for the coordinated control of lipogenesis. Feeding carbohydrate causes levels of liver glucose, Glucose-6-phosphate (Glc-6-P), and Fructose-6-phosphate (Fru-6-P) to rise. Elevation of Fru-6-P leads to elevation of Xu-5-P in reactions catalyzed by the near-equilibrium isomerases of the nonoxidative portion of the hexose monophosphate pathway (ribulose 5-phosphate (Ru5P) epimerase [EC 5.1.3.1], ribose 5-phosphate (Rib5P) isomerase [EC 5.3.1.6], transaldolase [EC 2.2.1.2], and transketolase [EC 2.2.1.1]). The elevation of Xu-5-P is the coordinating signal that both acutely activates phosphofructokinase [PFK; EC 2.7.1.11] in glycolysis and promotes the action of the transcription factor carbohydrate responsive element binding protein (ChREBP) to increase transcription of the genes for the enzymes of lipogenesis, the hexose monophosphate shunt, and glycolysis, all of which are required for the de novo synthesis of fat. (PMID 12721358).

D-Xylulose 5-phosphate. CAS Common Chemistry. CAS, a division of the American Chemical Society, n.d. https://commonchemistry.cas.org/detail?cas_rn=4212-65-1 (retrieved 2024-07-16) (CAS RN: 4212-65-1). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

同义名列表

19 个代谢物同义名

{[(2R,3S)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acid; 5-O-Phosphono-D-threo-pentos-2-ulose; Xylulose-5-phosphate, (D)-isomer; D-Xylulose-5-phosphoric acid; keto-D-Xylulose 5-phosphate; Xylulose 5-phosphoric acid; 5-O-Phosphono-D-xylulose; D-Xylulose-5-phosphate; D-Xylulose 5-phosphate; Xylulose 5-phosphate; ribulose-5-phosphate; Xylulose-5-phosphate; Xylulose-phosphate; D-Xylulose 5-PO4; D-Xylulose-5-P; Xylulose-P; Xu-5-P; Xylulose 5-phosphate; Xylulose 5-phosphate



数据库引用编号

17 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(4)

PlantCyc(0)

代谢反应

383 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(25)

WikiPathways(2)

Plant Reactome(322)

INOH(3)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(31)

PharmGKB(0)

8 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表


文献列表

  • Shama Afroz, Kahkashan Khatoon, Zafar Warsi, Zakir Husain, Sanjeet Kumar Verma, Laiq Ur Rahman. Molecular cloning and heterologous expression analysis of 1-Deoxy-D-Xylulose-5-Phosphate Synthase gene in Centella asiatica L. Gene. 2024 Feb; 895(?):148015. doi: 10.1016/j.gene.2023.148015. [PMID: 37984537]
  • Xueni Di, David Ortega-Alarcon, Ramu Kakumanu, Javier Iglesias-Fernandez, Lucia Diaz, Edward E K Baidoo, Adrian Velazquez-Campoy, Manuel Rodríguez-Concepción, Jordi Perez-Gil. MEP pathway products allosterically promote monomerization of deoxy-D-xylulose-5-phosphate synthase to feedback-regulate their supply. Plant communications. 2022 Dec; ?(?):100512. doi: 10.1016/j.xplc.2022.100512. [PMID: 36575800]
  • Francesca Rizzello, Angelo De Paolis, Miriana Durante, Federica Blando, Giovanni Mita, Sofia Caretto. Enhanced production of bioactive isoprenoid compounds from cell suspension cultures of Artemisia annua L. using β-cyclodextrins. International journal of molecular sciences. 2014 Oct; 15(10):19092-105. doi: 10.3390/ijms151019092. [PMID: 25338048]
  • Liguo Feng, Chen Chen, Tinglin Li, Meng Wang, Jun Tao, Daqiu Zhao, Lixia Sheng. Flowery odor formation revealed by differential expression of monoterpene biosynthetic genes and monoterpene accumulation in rose (Rosa rugosa Thunb.). Plant physiology and biochemistry : PPB. 2014 Feb; 75(?):80-8. doi: 10.1016/j.plaphy.2013.12.006. [PMID: 24384414]
  • Lixia Liu, Lei Zhang, Wei Tang, Yang Gu, Qiang Hua, Sheng Yang, Weihong Jiang, Chen Yang. Phosphoketolase pathway for xylose catabolism in Clostridium acetobutylicum revealed by 13C metabolic flux analysis. Journal of bacteriology. 2012 Oct; 194(19):5413-22. doi: 10.1128/jb.00713-12. [PMID: 22865845]
  • Robert Hanczko, David R Fernandez, Edward Doherty, Yueming Qian, Gyorgy Vas, Brian Niland, Tiffany Telarico, Adinoyi Garba, Sanjay Banerjee, Frank A Middleton, Donna Barrett, Maureen Barcza, Katalin Banki, Steve K Landas, Andras Perl. Prevention of hepatocarcinogenesis and increased susceptibility to acetaminophen-induced liver failure in transaldolase-deficient mice by N-acetylcysteine. The Journal of clinical investigation. 2009 Jun; 119(6):1546-57. doi: 10.1172/jci35722. [PMID: 19436114]
  • Michael Eicks, Verónica Maurino, Silke Knappe, Ulf-Ingo Flügge, Karsten Fischer. The plastidic pentose phosphate translocator represents a link between the cytosolic and the plastidic pentose phosphate pathways in plants. Plant physiology. 2002 Feb; 128(2):512-22. doi: 10.1104/pp.010576. [PMID: 11842155]