UDP-beta-L-arabinofuranose (BioDeep_00000899570)
代谢物信息卡片
UDP-beta-L-arabinofuranose
化学式: C14H22N2O16P2 (536.0444552)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(O3)CO)O)O)O)O
InChI: InChI=1S/C14H22N2O16P2/c17-3-5-8(19)11(22)13(30-5)31-34(26,27)32-33(24,25)28-4-6-9(20)10(21)12(29-6)16-2-1-7(18)15-14(16)23/h1-2,5-6,8-13,17,19-22H,3-4H2,(H,24,25)(H,26,27)(H,15,18,23)/t5-,6+,8-,9+,10+,11+,12+,13+/m0/s1
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Anam Saqib, Henrik Vibe Scheller, Folmer Fredslund, Ditte Hededam Welner. Molecular characteristics of plant UDP-arabinopyranose mutases.
Glycobiology.
2019 11; 29(12):839-846. doi:
10.1093/glycob/cwz067. [PMID: 31679023] - Thomas Louveau, Anastasia Orme, Hans Pfalzgraf, Michael J Stephenson, Rachel Melton, Gerhard Saalbach, Andrew M Hemmings, Aymeric Leveau, Martin Rejzek, Robert J Vickerstaff, Tim Langdon, Robert A Field, Anne Osbourn. Analysis of Two New Arabinosyltransferases Belonging to the Carbohydrate-Active Enzyme (CAZY) Glycosyl Transferase Family1 Provides Insights into Disease Resistance and Sugar Donor Specificity.
The Plant cell.
2018 12; 30(12):3038-3057. doi:
10.1105/tpc.18.00641. [PMID: 30429223] - Hideyuki Honta, Takuya Inamura, Teruko Konishi, Shinobu Satoh, Hiroaki Iwai. UDP-arabinopyranose mutase gene expressions are required for the biosynthesis of the arabinose side chain of both pectin and arabinoxyloglucan, and normal leaf expansion in Nicotiana tabacum.
Journal of plant research.
2018 Mar; 131(2):307-317. doi:
10.1007/s10265-017-0985-6. [PMID: 29052022] - Jijin R A Kuttiyatveetil, David A R Sanders. Analysis of plant UDP-arabinopyranose mutase (UAM): Role of divalent metals and structure prediction.
Biochimica et biophysica acta. Proteins and proteomics.
2017 May; 1865(5):510-519. doi:
10.1016/j.bbapap.2017.02.005. [PMID: 28192204] - Carsten Rautengarten, Devon Birdseye, Sivakumar Pattathil, Heather E McFarlane, Susana Saez-Aguayo, Ariel Orellana, Staffan Persson, Michael G Hahn, Henrik V Scheller, Joshua L Heazlewood, Berit Ebert. The elaborate route for UDP-arabinose delivery into the Golgi of plants.
Proceedings of the National Academy of Sciences of the United States of America.
2017 04; 114(16):4261-4266. doi:
10.1073/pnas.1701894114. [PMID: 28373556] - Ditte Hededam Welner, Alex Yi Lin Tsai, Andy M DeGiovanni, Henrik Vibe Scheller, Paul D Adams. X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa.
Acta crystallographica. Section F, Structural biology communications.
2017 04; 73(Pt 4):241-245. doi:
10.1107/s2053230x17004587. [PMID: 28368284] - Nicholas A Genthe, James B Thoden, Hazel M Holden. Structure of the Escherichia coli ArnA N-formyltransferase domain in complex with N(5) -formyltetrahydrofolate and UDP-Ara4N.
Protein science : a publication of the Protein Society.
2016 08; 25(8):1555-62. doi:
10.1002/pro.2938. [PMID: 27171345] - Yves S Y Hsieh, Qisen Zhang, Kuok Yap, Neil J Shirley, Jelle Lahnstein, Clark J Nelson, Rachel A Burton, A Harvey Millar, Vincent Bulone, Geoffrey B Fincher. Genetics, Transcriptional Profiles, and Catalytic Properties of the UDP-Arabinose Mutase Family from Barley.
Biochemistry.
2016 Jan; 55(2):322-34. doi:
10.1021/acs.biochem.5b01055. [PMID: 26645466] - Si Wu, Fen Ning, Xiaolin Wu, Wei Wang. Proteomic Characterization of Differential Abundant Proteins Accumulated between Lower and Upper Epidermises of Fleshy Scales in Onion (Allium cepa L.) Bulbs.
PloS one.
2016; 11(12):e0168959. doi:
10.1371/journal.pone.0168959. [PMID: 28036352] - So Hyun Han, Bong Gyu Kim, Jeong A Yoon, Youhoon Chong, Joong-Hoon Ahn. Synthesis of flavonoid O-pentosides by Escherichia coli through engineering of nucleotide sugar pathways and glycosyltransferase.
Applied and environmental microbiology.
2014 May; 80(9):2754-62. doi:
10.1128/aem.03797-13. [PMID: 24561591] - Tomoyuki Konishi, Tsutomu Aohara, Tomohiro Igasaki, Noriko Hayashi, Yasumasa Miyazaki, Akira Takahashi, Hirohiko Hirochika, Hiroaki Iwai, Shinobu Satoh, Tadashi Ishii. Down-regulation of UDP-arabinopyranose mutase reduces the proportion of arabinofuranose present in rice cell walls.
Phytochemistry.
2011 Nov; 72(16):1962-8. doi:
10.1016/j.phytochem.2011.07.012. [PMID: 21824632] - Carsten Rautengarten, Berit Ebert, Thomas Herter, Christopher J Petzold, Tadashi Ishii, Aindrila Mukhopadhyay, Björn Usadel, Henrik Vibe Scheller. The interconversion of UDP-arabinopyranose and UDP-arabinofuranose is indispensable for plant development in Arabidopsis.
The Plant cell.
2011 Apr; 23(4):1373-90. doi:
10.1105/tpc.111.083931. [PMID: 21478444] - Qisen Zhang, Neil J Shirley, Rachel A Burton, Jelle Lahnstein, Maria Hrmova, Geoffrey B Fincher. The genetics, transcriptional profiles, and catalytic properties of UDP-alpha-D-xylose 4-epimerases from barley.
Plant physiology.
2010 Jun; 153(2):555-68. doi:
10.1104/pp.110.157644. [PMID: 20435741] - Tomoyuki Konishi, Mayumi Ohnishi-Kameyama, Kazumi Funane, Yasumasa Miyazaki, Teruko Konishi, Tadashi Ishii. An arginyl residue in rice UDP-arabinopyranose mutase is required for catalytic activity and autoglycosylation.
Carbohydrate research.
2010 Apr; 345(6):787-91. doi:
10.1016/j.carres.2010.01.008. [PMID: 20149347] - Wei Zeng, Mohor Chatterjee, Ahmed Faik. UDP-Xylose-stimulated glucuronyltransferase activity in wheat microsomal membranes: characterization and role in glucurono(arabino)xylan biosynthesis.
Plant physiology.
2008 May; 147(1):78-91. doi:
10.1104/pp.107.115576. [PMID: 18359844] - Teruko Konishi, Takumi Takeda, Yasumasa Miyazaki, Mayumi Ohnishi-Kameyama, Takahisa Hayashi, Malcolm A O'Neill, Tadashi Ishii. A plant mutase that interconverts UDP-arabinofuranose and UDP-arabinopyranose.
Glycobiology.
2007 Mar; 17(3):345-54. doi:
10.1093/glycob/cwl081. [PMID: 17182701] - Tadashi Ishii, Hiroshi Ono, Mayumi Ohnishi-Kameyama, Ikuko Maeda. Enzymic transfer of alpha-L-arabinopyranosyl residues to exogenous 1,4-linked beta-D-galacto-oligosaccharides using solubilized mung bean (Vigna radiata) hypocotyl microsomes and UDP-beta-L-arabinopyranose.
Planta.
2005 Aug; 221(6):953-63. doi:
10.1007/s00425-005-1504-x. [PMID: 15846502] - Christiane Ernst, Werner Klaffke. Chemical synthesis of uridine diphospho-D-xylose and UDP-L-arabinose.
The Journal of organic chemistry.
2003 Jul; 68(14):5780-3. doi:
10.1021/jo034379u. [PMID: 12839484] - Andrea Celia Porchia, Susanne Oxenbøll Sørensen, Henrik Vibe Scheller. Arabinoxylan biosynthesis in wheat. Characterization of arabinosyltransferase activity in Golgi membranes.
Plant physiology.
2002 Sep; 130(1):432-41. doi:
10.1104/pp.003400. [PMID: 12226522] - M Pauly, A Porchia, C E Olsen, K J Nunan, H V Scheller. Enzymatic synthesis and purification of uridine diphospho-beta-l-arabinopyranose, a substrate for the biosynthesis of plant polysaccharides.
Analytical biochemistry.
2000 Feb; 278(1):69-73. doi:
10.1006/abio.1999.4411. [PMID: 10640355] - G P Bolwell. Differential patterns of arabinosylation by membranes of suspension-cultured cells of Phaseolus vulgaris (French bean) after subculture or elicitation.
The Biochemical journal.
1984 Sep; 222(2):427-35. doi:
10.1042/bj2220427. [PMID: 6477524] - T Hayashi, G Maclachlan. Biosynthesis of pentosyl lipids by pea membranes.
The Biochemical journal.
1984 Feb; 217(3):791-803. doi:
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