D-ribulose 1-phosphate (BioDeep_00000841029)

   


代谢物信息卡片


D-ribulose 1-phosphate

化学式: C5H11O8P (230.0192)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(otcml) 45.69%

分子结构信息

SMILES: C(C(C(C(=O)COP(=O)(O)O)O)O)O
InChI: InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h3,5-7,9H,1-2H2,(H2,10,11,12)/t3-,5-/m1/s1

描述信息

同义名列表

1 个代谢物同义名

D-ribulose 1-phosphate



数据库引用编号

4 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表


文献列表

  • Nina V Doronina, Anna A Gogleva, Yuri A Trotsenko. Methylophilus glucosoxydans sp. nov., a restricted facultative methylotroph from rice rhizosphere. International journal of systematic and evolutionary microbiology. 2012 Jan; 62(Pt 1):196-201. doi: 10.1099/ijs.0.024620-0. [PMID: 21378135]
  • Timo Mühlhaus, Julia Weiss, Dorothea Hemme, Frederik Sommer, Michael Schroda. Quantitative shotgun proteomics using a uniform ¹⁵N-labeled standard to monitor proteome dynamics in time course experiments reveals new insights into the heat stress response of Chlamydomonas reinhardtii. Molecular & cellular proteomics : MCP. 2011 Sep; 10(9):M110.004739. doi: 10.1074/mcp.m110.004739. [PMID: 21610104]
  • Xianping Fang, Huasheng Ma, Dezhao Lu, Hong Yu, Wenguo Lai, Songlin Ruan. Comparative proteomics analysis of proteins expressed in the I-1 and I-2 internodes of strawberry stolons. Proteome science. 2011 May; 9(?):26. doi: 10.1186/1477-5956-9-26. [PMID: 21569547]
  • Wagner L Araújo, Adriano Nunes-Nesi, Sonia Osorio, Björn Usadel, Daniela Fuentes, Réka Nagy, Ilse Balbo, Martin Lehmann, Claudia Studart-Witkowski, Takayuki Tohge, Enrico Martinoia, Xavier Jordana, Fábio M Damatta, Alisdair R Fernie. Antisense inhibition of the iron-sulphur subunit of succinate dehydrogenase enhances photosynthesis and growth in tomato via an organic acid-mediated effect on stomatal aperture. The Plant cell. 2011 Feb; 23(2):600-27. doi: 10.1105/tpc.110.081224. [PMID: 21307286]
  • Iker Aranjuelo, Gemma Molero, Gorka Erice, Jean Christophe Avice, Salvador Nogués. Plant physiology and proteomics reveals the leaf response to drought in alfalfa (Medicago sativa L.). Journal of experimental botany. 2011 Jan; 62(1):111-23. doi: 10.1093/jxb/erq249. [PMID: 20797998]
  • Tamara Zimaro, Natalia Gottig, Betiana S Garavaglia, Chris Gehring, Jorgelina Ottado. Unraveling plant responses to bacterial pathogens through proteomics. Journal of biomedicine & biotechnology. 2011; 2011(?):354801. doi: 10.1155/2011/354801. [PMID: 22131803]
  • Sadaf Khan, Scott C Rowe, Frank G Harmon. Coordination of the maize transcriptome by a conserved circadian clock. BMC plant biology. 2010 Jun; 10(?):126. doi: 10.1186/1471-2229-10-126. [PMID: 20576144]
  • Szymon Jozefczuk, Sebastian Klie, Gareth Catchpole, Jedrzej Szymanski, Alvaro Cuadros-Inostroza, Dirk Steinhauser, Joachim Selbig, Lothar Willmitzer. Metabolomic and transcriptomic stress response of Escherichia coli. Molecular systems biology. 2010 May; 6(?):364. doi: 10.1038/msb.2010.18. [PMID: 20461071]
  • Kennan Kellaris Salinero, Keith Keller, William S Feil, Helene Feil, Stephan Trong, Genevieve Di Bartolo, Alla Lapidus. Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation. BMC genomics. 2009 Aug; 10(?):351. doi: 10.1186/1471-2164-10-351. [PMID: 19650930]
  • Laurent G Deluc, David R Quilici, Alain Decendit, Jérôme Grimplet, Matthew D Wheatley, Karen A Schlauch, Jean-Michel Mérillon, John C Cushman, Grant R Cramer. Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and Chardonnay. BMC genomics. 2009 May; 10(?):212. doi: 10.1186/1471-2164-10-212. [PMID: 19426499]
  • Shuhui Song, Hongzhu Qu, Chen Chen, Songnian Hu, Jun Yu. Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data. BMC plant biology. 2007 Sep; 7(?):49. doi: 10.1186/1471-2229-7-49. [PMID: 17877838]
  • Stefan Jelakovic, Stanislav Kopriva, Karl Heinz Süss, Georg E Schulz. Structure and catalytic mechanism of the cytosolic D-ribulose-5-phosphate 3-epimerase from rice. Journal of molecular biology. 2003 Feb; 326(1):127-35. doi: 10.1016/s0022-2836(02)01374-8. [PMID: 12547196]
  • Agnieszka Sekowska, Antoine Danchin. The methionine salvage pathway in Bacillus subtilis. BMC microbiology. 2002 Apr; 2(?):8. doi: 10.1186/1471-2180-2-8. [PMID: 12022921]
  • Helena Sävenstrand, Mikael Brosché, Ake Strid. Regulation of gene expression by low levels of ultraviolet-B radiation in Pisum sativum: isolation of novel genes by suppression subtractive hybridisation. Plant & cell physiology. 2002 Apr; 43(4):402-10. doi: 10.1093/pcp/pcf047. [PMID: 11978868]