L-Xylitol 5-phosphate (BioDeep_00000839329)
代谢物信息卡片
L-Xylitol 5-phosphate
化学式: C5H13O8P (232.0348028)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C(C(C(C(COP(=O)(O)O)O)O)O)O
InChI: InChI=1S/C5H13O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4+,5+/m1/s1
相关代谢途径
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代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Ousseynou Sarr, Isabelle Louveau, Isabelle Le Huërou-Luron, Florence Gondret. Adipose tissue proteomes of intrauterine growth-restricted piglets artificially reared on a high-protein neonatal formula.
The Journal of nutritional biochemistry.
2012 Nov; 23(11):1417-24. doi:
10.1016/j.jnutbio.2011.09.002. [PMID: 22221677] - Chen Wang, Xuexin Fan, Xiaofang Cao, Xiang Liu, Lanfen Li, Xiaodong Su. Preliminary crystallographic analysis of two hypothetical ribose-5-phosphate isomerases from Streptococcus mutans.
Acta crystallographica. Section F, Structural biology and crystallization communications.
2012 May; 68(Pt 5):565-8. doi:
10.1107/s1744309112009761. [PMID: 22691789] - Alok Ranjan, Deepti Nigam, Mehar H Asif, Ruchi Singh, Sanjay Ranjan, Shrikant Mantri, Neha Pandey, Ila Trivedi, Krishan Mohan Rai, Satya N Jena, Bhupendra Koul, Rakesh Tuli, Uday V Pathre, Samir V Sawant. Genome wide expression profiling of two accession of G. herbaceum L. in response to drought.
BMC genomics.
2012 Mar; 13(?):94. doi:
10.1186/1471-2164-13-94. [PMID: 22424186] - Mirko Zaffagnini, Mariette Bedhomme, Hayam Groni, Christophe H Marchand, Carine Puppo, Brigitte Gontero, Corinne Cassier-Chauvat, Paulette Decottignies, Stéphane D Lemaire. Glutathionylation in the photosynthetic model organism Chlamydomonas reinhardtii: a proteomic survey.
Molecular & cellular proteomics : MCP.
2012 Feb; 11(2):M111.014142. doi:
10.1074/mcp.m111.014142. [PMID: 22122882] - Tahmineh Khazaei, Alison McGuigan, Radhakrishnan Mahadevan. Ensemble modeling of cancer metabolism.
Frontiers in physiology.
2012; 3(?):135. doi:
10.3389/fphys.2012.00135. [PMID: 22623918] - Huawu Jiang, Pingzhi Wu, Sheng Zhang, Chi Song, Yaping Chen, Meiru Li, Yongxia Jia, Xiaohua Fang, Fan Chen, Guojiang Wu. Global analysis of gene expression profiles in developing physic nut (Jatropha curcas L.) seeds.
PloS one.
2012; 7(5):e36522. doi:
10.1371/journal.pone.0036522. [PMID: 22574177] - Arun K Mishra, Nicole N Driessen, Ben J Appelmelk, Gurdyal S Besra. Lipoarabinomannan and related glycoconjugates: structure, biogenesis and role in Mycobacterium tuberculosis physiology and host-pathogen interaction.
FEMS microbiology reviews.
2011 Nov; 35(6):1126-57. doi:
10.1111/j.1574-6976.2011.00276.x. [PMID: 21521247] - David M Rosenthal, Anna M Locke, Mahdi Khozaei, Christine A Raines, Stephen P Long, Donald R Ort. Over-expressing the C(3) photosynthesis cycle enzyme Sedoheptulose-1-7 Bisphosphatase improves photosynthetic carbon gain and yield under fully open air CO(2) fumigation (FACE).
BMC plant biology.
2011 Aug; 11(?):123. doi:
10.1186/1471-2229-11-123. [PMID: 21884586] - Claudia Vanesa Piattoni, Diego Martín Bustos, Sergio Adrián Guerrero, Alberto Álvaro Iglesias. Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase is phosphorylated in wheat endosperm at serine-404 by an SNF1-related protein kinase allosterically inhibited by ribose-5-phosphate.
Plant physiology.
2011 Jul; 156(3):1337-50. doi:
10.1104/pp.111.177261. [PMID: 21546456] - Douangdao Soukaloun, Sue J Lee, Karen Chamberlain, Ann M Taylor, Mayfong Mayxay, Kongkham Sisouk, Bandit Soumphonphakdy, Khaysy Latsavong, Kongsin Akkhavong, Douangkham Phommachanh, Vanmaly Sengmeuang, Khonsavanh Luangxay, Theresa McDonagh, Nicholas J White, Paul N Newton. Erythrocyte transketolase activity, markers of cardiac dysfunction and the diagnosis of infantile beriberi.
PLoS neglected tropical diseases.
2011 Feb; 5(2):e971. doi:
10.1371/journal.pntd.0000971. [PMID: 21364976] - Cyril Moccand, Markus Kaufmann, Teresa B Fitzpatrick. It takes two to tango: defining an essential second active site in pyridoxal 5'-phosphate synthase.
PloS one.
2011 Jan; 6(1):e16042. doi:
10.1371/journal.pone.0016042. [PMID: 21283685] - Anna Tylki-Szymańska, Teresa J Stradomska. [A newly discovered metabolic diseases due to defects in the pentose pathway].
Postepy biochemii.
2011; 57(2):168-71. doi:
. [PMID: 21913417] - Piotr Bielecki, Jacek Puchałka, Melissa L Wos-Oxley, Holger Loessner, Justyna Glik, Marek Kawecki, Mariusz Nowak, Burkhard Tümmler, Siegfried Weiss, Vítor A P Martins dos Santos. In-vivo expression profiling of Pseudomonas aeruginosa infections reveals niche-specific and strain-independent transcriptional programs.
PloS one.
2011; 6(9):e24235. doi:
10.1371/journal.pone.0024235. [PMID: 21931663] - Takayuki Tohge, Tabea Mettler, Stéphanie Arrivault, Adam James Carroll, Mark Stitt, Alisdair R Fernie. From models to crop species: caveats and solutions for translational metabolomics.
Frontiers in plant science.
2011; 2(?):61. doi:
10.3389/fpls.2011.00061. [PMID: 22639601] - Navneet Kaur, Jianping Hu. Defining the plant peroxisomal proteome: from Arabidopsis to rice.
Frontiers in plant science.
2011; 2(?):103. doi:
10.3389/fpls.2011.00103. [PMID: 22645559] - Ping Kong, Brett M Tyler, Patricia A Richardson, Bobby W K Lee, Zhaohui S Zhou, Chuanxue Hong. Zoospore interspecific signaling promotes plant infection by Phytophthora.
BMC microbiology.
2010 Dec; 10(?):313. doi:
10.1186/1471-2180-10-313. [PMID: 21138563] - Kristin Baumann, Marc Carnicer, Martin Dragosits, Alexandra B Graf, Johannes Stadlmann, Paula Jouhten, Hannu Maaheimo, Brigitte Gasser, Joan Albiol, Diethard Mattanovich, Pau Ferrer. A multi-level study of recombinant Pichia pastoris in different oxygen conditions.
BMC systems biology.
2010 Oct; 4(?):141. doi:
10.1186/1752-0509-4-141. [PMID: 20969759] - Johanna M S Lemons, Xiao-Jiang Feng, Bryson D Bennett, Aster Legesse-Miller, Elizabeth L Johnson, Irene Raitman, Elizabeth A Pollina, Herschel A Rabitz, Joshua D Rabinowitz, Hilary A Coller. Quiescent fibroblasts exhibit high metabolic activity.
PLoS biology.
2010 Oct; 8(10):e1000514. doi:
10.1371/journal.pbio.1000514. [PMID: 21049082] - Sadaf Khan, Scott C Rowe, Frank G Harmon. Coordination of the maize transcriptome by a conserved circadian clock.
BMC plant biology.
2010 Jun; 10(?):126. doi:
10.1186/1471-2229-10-126. [PMID: 20576144] - Szymon Jozefczuk, Sebastian Klie, Gareth Catchpole, Jedrzej Szymanski, Alvaro Cuadros-Inostroza, Dirk Steinhauser, Joachim Selbig, Lothar Willmitzer. Metabolomic and transcriptomic stress response of Escherichia coli.
Molecular systems biology.
2010 May; 6(?):364. doi:
10.1038/msb.2010.18. [PMID: 20461071] - Pierre Cochat, Valérie Pichault, Justine Bacchetta, Laurence Dubourg, Jean-François Sabot, Christine Saban, Michel Daudon, Aurélia Liutkus. Nephrolithiasis related to inborn metabolic diseases.
Pediatric nephrology (Berlin, Germany).
2010 Mar; 25(3):415-24. doi:
10.1007/s00467-008-1085-6. [PMID: 19156444] - Rahul C Deo, Luke Hunter, Gregory D Lewis, Guillaume Pare, Ramachandran S Vasan, Daniel Chasman, Thomas J Wang, Robert E Gerszten, Frederick P Roth. Interpreting metabolomic profiles using unbiased pathway models.
PLoS computational biology.
2010 Feb; 6(2):e1000692. doi:
10.1371/journal.pcbi.1000692. [PMID: 20195502] - Cristina Airoldi, Silvia Sommaruga, Silvia Merlo, Paola Sperandeo, Laura Cipolla, Alessandra Polissi, Francesco Nicotra. Targeting bacterial membranes: NMR spectroscopy characterization of substrate recognition and binding requirements of D-arabinose-5-phosphate isomerase.
Chemistry (Weinheim an der Bergstrasse, Germany).
2010 Feb; 16(6):1897-902. doi:
10.1002/chem.200902619. [PMID: 20039350] - Tomohisa Hasunuma, Kazuo Harada, Shin-Ichi Miyazawa, Akihiko Kondo, Eiichiro Fukusaki, Chikahiro Miyake. Metabolic turnover analysis by a combination of in vivo 13C-labelling from 13CO2 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C3 photosynthetic pathway in Nicotiana tabacum leaves.
Journal of experimental botany.
2010 Feb; 61(4):1041-51. doi:
10.1093/jxb/erp374. [PMID: 20026474] - Marijana Todorcević, Stanko Skugor, Aleksei Krasnov, Bente Ruyter. Gene expression profiles in Atlantic salmon adipose-derived stromo-vascular fraction during differentiation into adipocytes.
BMC genomics.
2010 Jan; 11(?):39. doi:
10.1186/1471-2164-11-39. [PMID: 20078893] - Richard W Strange, Svetlana V Antonyuk, Mark J Ellis, Yoshitaka Bessho, Seiki Kuramitsu, Shigeyuki Yokoyama, S Samar Hasnain. The structure of an archaeal ribose-5-phosphate isomerase from Methanocaldococcus jannaschii (MJ1603).
Acta crystallographica. Section F, Structural biology and crystallization communications.
2009 Dec; 65(Pt 12):1214-7. doi:
10.1107/s1744309109044923. [PMID: 20054114] - Yuqing Xiong, Christopher DeFraia, Donna Williams, Xudong Zhang, Zhonglin Mou. Deficiency in a cytosolic ribose-5-phosphate isomerase causes chloroplast dysfunction, late flowering and premature cell death in Arabidopsis.
Physiologia plantarum.
2009 Nov; 137(3):249-63. doi:
10.1111/j.1399-3054.2009.01276.x. [PMID: 19744161] - Neil I Bower, Richard G Taylor, Ian A Johnston. Phasing of muscle gene expression with fasting-induced recovery growth in Atlantic salmon.
Frontiers in zoology.
2009 Aug; 6(?):18. doi:
10.1186/1742-9994-6-18. [PMID: 19703292] - Gui-Lan Li, Xiang Liu, Jie Nan, Erik Brostromer, Lan-Fen Li, Xiao-Dong Su. Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans.
Biochemical and biophysical research communications.
2009 Apr; 381(3):429-33. doi:
10.1016/j.bbrc.2009.02.049. [PMID: 19222992] - Thomas Raschle, Davide Speziga, Wolfgang Kress, Cyril Moccand, Peter Gehrig, Nikolaus Amrhein, Eilika Weber-Ban, Teresa B Fitzpatrick. Intersubunit cross-talk in pyridoxal 5'-phosphate synthase, coordinated by the C terminus of the synthase subunit.
The Journal of biological chemistry.
2009 Mar; 284(12):7706-18. doi:
10.1074/jbc.m804728200. [PMID: 19074821] - Rachna Agarwal, Stefan Ortleb, Jayashree Krishna Sainis, Michael Melzer. Immunoelectron microscopy for locating calvin cycle enzymes in the thylakoids of synechocystis 6803.
Molecular plant.
2009 Jan; 2(1):32-42. doi:
10.1093/mp/ssn075. [PMID: 19529819] - Laure Michelet, Mirko Zaffagnini, Hélène Vanacker, Pierre Le Maréchal, Christophe Marchand, Michael Schroda, Stéphane D Lemaire, Paulette Decottignies. In vivo targets of S-thiolation in Chlamydomonas reinhardtii.
The Journal of biological chemistry.
2008 Aug; 283(31):21571-8. doi:
10.1074/jbc.m802331200. [PMID: 18534986] - Frances M Dupont. Metabolic pathways of the wheat (Triticum aestivum) endosperm amyloplast revealed by proteomics.
BMC plant biology.
2008 Apr; 8(?):39. doi:
10.1186/1471-2229-8-39. [PMID: 18419817] - Jeewon Kim, Sook-Hee Kim, Haymie Choi. Dehydroepiandrosterone supplement increases malate dehydrogenase activity and decreases NADPH-dependent antioxidant enzyme activity in rat hepatocellular carcinogenesis.
Nutrition research and practice.
2008; 2(2):80-4. doi:
10.4162/nrp.2008.2.2.80. [PMID: 20126370] - Pedro Díaz-Vivancos, María José Clemente-Moreno, Manuel Rubio, Enrique Olmos, Juan Antonio García, Pedro Martínez-Gómez, José Antonio Hernández. Alteration in the chloroplastic metabolism leads to ROS accumulation in pea plants in response to plum pox virus.
Journal of experimental botany.
2008; 59(8):2147-60. doi:
10.1093/jxb/ern082. [PMID: 18535298] - Pål Stenmark, Martin Moche, Daniel Gurmu, Pär Nordlund. The crystal structure of the bifunctional deaminase/reductase RibD of the riboflavin biosynthetic pathway in Escherichia coli: implications for the reductive mechanism.
Journal of molecular biology.
2007 Oct; 373(1):48-64. doi:
10.1016/j.jmb.2006.12.009. [PMID: 17765262] - Ivi C Tsantili, M Nazmul Karim, Maria I Klapa. Quantifying the metabolic capabilities of engineered Zymomonas mobilis using linear programming analysis.
Microbial cell factories.
2007 Mar; 6(?):8. doi:
10.1186/1475-2859-6-8. [PMID: 17349037] - Thomas Raschle, Duilio Arigoni, René Brunisholz, Helene Rechsteiner, Nikolaus Amrhein, Teresa B Fitzpatrick. Reaction mechanism of pyridoxal 5'-phosphate synthase. Detection of an enzyme-bound chromophoric intermediate.
The Journal of biological chemistry.
2007 Mar; 282(9):6098-105. doi:
10.1074/jbc.m610614200. [PMID: 17189272] - Sergio Grimbs, Joachim Selbig, Sascha Bulik, Hermann-Georg Holzhütter, Ralf Steuer. The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks.
Molecular systems biology.
2007; 3(?):146. doi:
10.1038/msb4100186. [PMID: 18004279] - Nuray N Ulusu, Berivan Tandogan. Purification and kinetics of sheep kidney cortex glucose-6-phosphate dehydrogenase.
Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.
2006 Feb; 143(2):249-55. doi:
10.1016/j.cbpb.2005.11.018. [PMID: 16406826] - Nathalie Boddaert, Maria Ribeiro, Guy Touati, Karine Mention, Vassili Valayanopoulos, Claire Nihoul-Fékété, Francis Brunelle, Pascale de Lonlay. [Radiological innovations in the screening and diagnosis of the inborn errors of metabolism].
Medecine sciences : M/S.
2005 Nov; 21(11):981-6. doi:
10.1051/medsci/20052111981. [PMID: 16274650] - Kamil Olejnik, Elzbieta Kraszewska. Cloning and characterization of an Arabidopsis thaliana Nudix hydrolase homologous to the mammalian GFG protein.
Biochimica et biophysica acta.
2005 Sep; 1752(2):133-41. doi:
10.1016/j.bbapap.2005.07.021. [PMID: 16154395] - Hairong Huang, Michael S Scherman, Wim D'Haeze, Danny Vereecke, Marcelle Holsters, Dean C Crick, Michael R McNeil. Identification and active expression of the Mycobacterium tuberculosis gene encoding 5-phospho-{alpha}-d-ribose-1-diphosphate: decaprenyl-phosphate 5-phosphoribosyltransferase, the first enzyme committed to decaprenylphosphoryl-d-arabinose synthesis.
The Journal of biological chemistry.
2005 Jul; 280(26):24539-43. doi:
10.1074/jbc.m504068200. [PMID: 15878857] - M M C Wamelink, D E C Smith, C Jakobs, N M Verhoeven. Analysis of polyols in urine by liquid chromatography-tandem mass spectrometry: a useful tool for recognition of inborn errors affecting polyol metabolism.
Journal of inherited metabolic disease.
2005; 28(6):951-63. doi:
10.1007/s10545-005-0233-4. [PMID: 16435188] - Jérôme Delplanque, Ghislain Delpierre, Fred R Opperdoes, Emile Van Schaftingen. Tissue distribution and evolution of fructosamine 3-kinase and fructosamine 3-kinase-related protein.
The Journal of biological chemistry.
2004 Nov; 279(45):46606-13. doi:
10.1074/jbc.m407678200. [PMID: 15331600] - Roya Babaei-Jadidi, Nikolaos Karachalias, Naila Ahmed, Sinan Battah, Paul J Thornalley. Prevention of incipient diabetic nephropathy by high-dose thiamine and benfotiamine.
Diabetes.
2003 Aug; 52(8):2110-20. doi:
10.2337/diabetes.52.8.2110. [PMID: 12882930] - Sergio Esposito, Graziella Massaro, Vincenza Vona, Vittoria Di Martino Rigano, Simona Carfagna. Glutamate synthesis in barley roots: the role of the plastidic glucose-6-phosphate dehydrogenase.
Planta.
2003 Feb; 216(4):639-47. doi:
10.1007/s00425-002-0892-4. [PMID: 12569406] - S D Sharma, B N Pandey, K P Mishra, S Sivakami. Amadori product and age formation during nonenzymatic glycosylation of bovine serum albumin in vitro.
Journal of biochemistry, molecular biology, and biophysics : JBMBB : the official journal of the Federation of Asian and Oceanian Biochemists and Molecular Biologists (FAOBMB).
2002 Aug; 6(4):233-42. doi:
10.1080/10258140290031554. [PMID: 12186738] - Scott M Lohrke, Pierre D Dery, Wei Li, Ralph Reedy, Donald Y Kobayashi, Daniel R Roberts. Mutation of rpiA in Enterobacter cloacae decreases seed and root colonization and biocontrol of damping-off caused by Pythium ultimum on cucumber.
Molecular plant-microbe interactions : MPMI.
2002 Aug; 15(8):817-25. doi:
10.1094/mpmi.2002.15.8.817. [PMID: 12182339] - Yih-Ling Tzeng, Anup Datta, Christy Strole, V S Kumar Kolli, Matthew R Birck, William P Taylor, Russell W Carlson, Ronald W Woodard, David S Stephens. KpsF is the arabinose-5-phosphate isomerase required for 3-deoxy-D-manno-octulosonic acid biosynthesis and for both lipooligosaccharide assembly and capsular polysaccharide expression in Neisseria meningitidis.
The Journal of biological chemistry.
2002 Jul; 277(27):24103-13. doi:
10.1074/jbc.m200931200. [PMID: 11956197] - A Tabernero, C Jiménez, A Velasco, C Giaume, J M Medina. The enhancement of glucose uptake caused by the collapse of gap junction communication is due to an increase in astrocyte proliferation.
Journal of neurochemistry.
2001 Aug; 78(4):890-8. doi:
10.1046/j.1471-4159.2001.00476.x. [PMID: 11520909] - Y Q Liu, E Montanya, J L Leahy. Increased islet DNA synthesis and glucose-derived lipid and amino acid production in association with beta-cell hyperproliferation in normoglycaemic 60 \% pancreatectomy rats.
Diabetologia.
2001 Aug; 44(8):1026-33. doi:
10.1007/s001250100597. [PMID: 11484081] - . .
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