Propidium (BioDeep_00000838413)
代谢物信息卡片
Propidium
化学式: C27H34N4+2 (414.2783)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: CC[N+](C)(CC)CCC[N+]1=C2C=C(C=CC2=C3C=CC(=CC3=C1C4=CC=CC=C4)N)N
InChI: InChI=1S/C27H33N4/c1-4-31(3,5-2)17-9-16-30-26-19-22(29)13-15-24(26)23-14-12-21(28)18-25(23)27(30)20-10-7-6-8-11-20/h6-8,10-15,18-19,29H,4-5,9,16-17,28H2,1-3H3/q+1/p+1
描述信息
D019995 - Laboratory Chemicals > D007202 - Indicators and Reagents > D007364 - Intercalating Agents
D004396 - Coloring Agents
同义名列表
1 个代谢物同义名
数据库引用编号
7 个数据库交叉引用编号
- ChEBI: CHEBI:51246
- PubChem: 4939
- DrugBank: DB02166
- ChEMBL: CHEMBL345124
- ChEMBL: CHEMBL332935
- MeSH: Propidium
- CAS: 36015-30-2
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
| 亚细胞结构定位 | 关联基因列表 |
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文献列表
- Katrin Zöller, Anna Karlegger, Martyna Truszkowska, Daniel Stengel, Andreas Bernkop-Schnürch. Fluorescent hydrophobic ion pairs: A powerful tool to investigate cellular uptake of hydrophobic drug complexes via lipid-based nanocarriers.
Journal of colloid and interface science.
2024 Jan; 654(Pt A):174-188. doi:
10.1016/j.jcis.2023.10.001. [PMID: 37839235] - Elham Einafshar, Leila Mobasheri, Maede Hasanpour, Roghayeh Rashidi, Ahmad Ghorbani. Pro-apoptotic effect of chloroform fraction of Moraea sisyrinchium bulb against glioblastoma cells.
Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.
2024 Jan; 170(?):115931. doi:
10.1016/j.biopha.2023.115931. [PMID: 38016363] - Noor Zafirah Ismail, Salwani Md Saad, Ismail Abiola Adebayo, Zaleha Md Toha, Rafedah Abas, Nur Nadhirah Mohamad Zain, Hasni Arsad. The antiproliferative and apoptotic potential of Clinacanthus nutans against human breast cancer cells through targeted apoptosis pathway.
Environmental science and pollution research international.
2022 Nov; 29(54):81685-81702. doi:
10.1007/s11356-022-20858-y. [PMID: 35737268] - Kapudeep Karmakar, Rohan Bhattacharya, Abhishek Sharma, Kirti Parmar, Utpal Nath, Karaba N Nataraja, Earanna N, Gaurav Sharma, Dipshikha Chakravortty. Lysinibacillus macroides-mediated control of cellulose-producing morphotype of Salmonella.
Journal of the science of food and agriculture.
2022 Nov; 102(14):6491-6501. doi:
10.1002/jsfa.12016. [PMID: 35567417] - Rodrigo Bainy Leal, Josiane Mann, Vanir Reis Pinto-Junior, Messias Vital Oliveira, Vinicius Jose Silva Osterne, Ingrid Alessandra Victoria Wolin, Ana Paula Machado Nascimento, Priscilla Gomes Welter, Valeria Maria Sousa Ferreira, Alice Araujo Silva, Rodrigo Lopes Seeger, Kyria Santiago Nascimento, Benildo Sousa Cavada. Structural Prediction and Characterization of Canavalia grandiflora (ConGF) Lectin Complexed with MMP1: Unveiling the Antiglioma Potential of Legume Lectins.
Molecules (Basel, Switzerland).
2022 Oct; 27(20):. doi:
10.3390/molecules27207089. [PMID: 36296679] - Alexander Chota, Blassan P George, Heidi Abrahamse. In Vitro Cell Death Mechanisms Induced by Dicoma anomala Root Extract in Combination with ZnPcS4 Mediated-Photodynamic Therapy in A549 Lung Cancer Cells.
Cells.
2022 10; 11(20):. doi:
10.3390/cells11203288. [PMID: 36291155] - Hong Jiang, Jian-Hua Wei, Cui-Yan Lin, Gui-Bin Liang, Rui-Jie He, Ri-Zhen Huang, Xian-Li Ma, Guo-Bao Huang, Ye Zhang. Ursolic acid-piperazine-dithiocarbamate ruthenium(II) polypyridyl complexes induced necroptosis in MGC-803 cells.
Metallomics : integrated biometal science.
2022 10; 14(10):. doi:
10.1093/mtomcs/mfac072. [PMID: 36149330] - Wen-Bin Zhao, Jun-Xia An, Yong-Mei Hu, An-Ping Li, Shao-Yong Zhang, Bao-Qi Zhang, Zhi-Jun Zhang, Xiong-Fei Luo, Qiang Bian, Yue Ma, Yan-Yan Ding, Rui Wang, Ying-Qian Liu. Tavaborole-Induced Inhibition of the Aminoacyl-tRNA Biosynthesis Pathway against Botrytis cinerea Contributes to Disease Control and Fruit Quality Preservation.
Journal of agricultural and food chemistry.
2022 Oct; 70(39):12297-12309. doi:
10.1021/acs.jafc.2c03441. [PMID: 36149871] - Liqian Peng, Yue Lu, Jinyao Zhong, Yanan Ke, Yanhong Li, Bihua Liang, Huaping Li, Huilan Zhu, Zhenjie Li. Lycium barbarum polysaccharide promotes proliferation of human melanocytes via activating the Nrf2/p62 signaling pathway by inducing autophagy in vitro.
Journal of food biochemistry.
2022 10; 46(10):e14301. doi:
10.1111/jfbc.14301. [PMID: 35765891] - Yihui Gu, Zhichao Wang, Chengjiang Wei, Yuehua Li, Wei Feng, Wei Wang, Meiqi Chang, Yu Chen, Qingfeng Li. Photonic hyperthermia of malignant peripheral nerve sheath tumors at the third near-infrared biowindow.
eLife.
2022 09; 11(?):. doi:
10.7554/elife.75473. [PMID: 36111780] - Ali Chai, Quancheng Wang, Huajun Kang, Leiyan Yan, Yunping Huang, Yanxia Shi, Xuewen Xie, Lei Li, Tengfei Fan, Yuhong Wang, Baoju Li. Rapid Quantification of Infectious Cucumber green mottle mosaic virus in Watermelon Tissues by PMA Coupled with RT-qPCR.
Viruses.
2022 09; 14(9):. doi:
10.3390/v14092046. [PMID: 36146852] - Tomasz Gębarowski, Izabela Jęśkowiak, Benita Wiatrak. Investigation of the Properties of Linen Fibers and Dressings.
International journal of molecular sciences.
2022 Sep; 23(18):. doi:
10.3390/ijms231810480. [PMID: 36142392] - Winni Alves Ladeia, Felippe Danyel Cardoso Martins, Beatriz de Souza Lima Nino, Arielle da Cunha Silvério, Ana Clécia da Silva, Raul Ossada, Douglas Aparecido da Silva, João Luis Garcia, Roberta Lemos Freire. High occurrence of viable forms of Cryptosporidium and Giardia in domestic sewage from an agricultural region of Brazil.
Journal of water and health.
2022 Sep; 20(9):1405-1415. doi:
10.2166/wh.2022.127. [PMID: 36170194] - Francis Boudreault, Ju Jing Tan, Ryszard Grygorczyk. Propidium uptake and ATP release in A549 cells share similar transport mechanisms.
Biophysical journal.
2022 05; 121(9):1593-1609. doi:
10.1016/j.bpj.2022.04.007. [PMID: 35398020] - Heung-Shick Lee, Younhee Kim. Myricetin Disturbs the Cell Wall Integrity and Increases the Membrane Permeability of Candida albicans.
Journal of microbiology and biotechnology.
2022 Jan; 32(1):37-45. doi:
10.4014/jmb.2110.10014. [PMID: 34750288] - Neda Kosari, Faham Khamesipour. Dracocephalum kotschyi Boiss. In Vitro Efficacy on Growth and Apoptosis Induction in Leishmania major Promastigotes.
BioMed research international.
2022; 2022(?):8109264. doi:
10.1155/2022/8109264. [PMID: 36277896] - Albert S Lee, Olivia K Lamanna, Kenji Ishida, Elaise Hill, Andrew Nguyen, Michael H Hsieh. A Novel Propidium Monoazide-Based PCR Assay Can Measure Viable Uropathogenic E. coli In Vitro and In Vivo.
Frontiers in cellular and infection microbiology.
2022; 12(?):794323. doi:
10.3389/fcimb.2022.794323. [PMID: 35178354] - Wei Hong, Jin Xiong, Raphael Nyaruaba, Junhua Li, Elishiba Muturi, Huan Liu, Junping Yu, Hang Yang, Hongping Wei. Rapid determination of infectious SARS-CoV-2 in PCR-positive samples by SDS-PMA assisted RT-qPCR.
The Science of the total environment.
2021 Nov; 797(?):149085. doi:
10.1016/j.scitotenv.2021.149085. [PMID: 34293609] - Subhadip Ghatak, Dolly K Khona, Abhishek Sen, Kaixiang Huang, Gargi Jagdale, Kanhaiya Singh, Vinoj Gopalakrishnan, Kenneth G Cornetta, Sashwati Roy, Savita Khanna, Lane A Baker, Chandan K Sen. Electroceutical fabric lowers zeta potential and eradicates coronavirus infectivity upon contact.
Scientific reports.
2021 11; 11(1):21723. doi:
10.1038/s41598-021-00910-6. [PMID: 34741051] - Minji Kim, Karen Shapiro, Verónica B Rajal, Andrea Packham, Beatriz Aguilar, Lezlie Rueda, Stefan Wuertz. Quantification of viable protozoan parasites on leafy greens using molecular methods.
Food microbiology.
2021 Oct; 99(?):103816. doi:
10.1016/j.fm.2021.103816. [PMID: 34119101] - Mark J Henderson, Kathleen A Trychta, Shyh-Ming Yang, Susanne Bäck, Adam Yasgar, Emily S Wires, Carina Danchik, Xiaokang Yan, Hideaki Yano, Lei Shi, Kuo-Jen Wu, Amy Q Wang, Dingyin Tao, Gergely Zahoránszky-Kőhalmi, Xin Hu, Xin Xu, David Maloney, Alexey V Zakharov, Ganesha Rai, Fumihiko Urano, Mikko Airavaara, Oksana Gavrilova, Ajit Jadhav, Yun Wang, Anton Simeonov, Brandon K Harvey. A target-agnostic screen identifies approved drugs to stabilize the endoplasmic reticulum-resident proteome.
Cell reports.
2021 04; 35(4):109040. doi:
10.1016/j.celrep.2021.109040. [PMID: 33910017] - Ludmila Trilisenko, Airat Valiakhmetov, Tatiana Kulakovskaya. Phosphate efflux as a test of plasma membrane leakage in Saccharomyces cerevisiae cells.
Canadian journal of microbiology.
2021 Mar; 67(3):226-230. doi:
10.1139/cjm-2020-0040. [PMID: 32910859] - Francine Perrine-Walker, Khoa Le. Propidium iodide enabled live imaging of Pasteuria sp.-Pratylenchus zeae infection studies under fluorescence microscopy.
Protoplasma.
2021 Mar; 258(2):279-287. doi:
10.1007/s00709-020-01567-0. [PMID: 33070241] - Galina F Makhaeva, Nadezhda V Kovaleva, Elena V Rudakova, Natalia P Boltneva, Sofya V Lushchekina, Irina I Faingold, Darya A Poletaeva, Yuliya V Soldatova, Raisa A Kotelnikova, Igor V Serkov, Anatoly K Ustinov, Alexey N Proshin, Eugene V Radchenko, Vladimir A Palyulin, Rudy J Richardson. New Multifunctional Agents Based on Conjugates of 4-Amino-2,3-polymethylenequinoline and Butylated Hydroxytoluene for Alzheimer's Disease Treatment.
Molecules (Basel, Switzerland).
2020 Dec; 25(24):. doi:
10.3390/molecules25245891. [PMID: 33322783] - Lucas P Dias, Ana L E Santos, Nadine M S Araújo, Romério R S Silva, Maria H C Santos, Renato R Roma, Bruno A M Rocha, Jose T A Oliveira, Claudener S Teixeira. Machaerium acutifolium lectin alters membrane structure and induces ROS production in Candida parapsilosis.
International journal of biological macromolecules.
2020 Nov; 163(?):19-25. doi:
10.1016/j.ijbiomac.2020.06.236. [PMID: 32599250] - Angus E Rae, Xiaoyang Wei, Neftali Flores-Rodriguez, David W McCurdy, David A Collings. Super-Resolution Fluorescence Imaging of Arabidopsis thaliana Transfer Cell Wall Ingrowths using Pseudo-Schiff Labelling Adapted for the Use of Different Dyes.
Plant & cell physiology.
2020 Oct; 61(10):1775-1787. doi:
10.1093/pcp/pcaa102. [PMID: 32761075] - Elisandra Triches da Cunha, Ana Marina Pedrolo, Franciele Paludo, Mirella Crhistine Scariot, Ana Carolina Maisonnave Arisi. Azospirillum brasilense viable cells enumeration using propidium monoazide-quantitative PCR.
Archives of microbiology.
2020 Sep; 202(7):1653-1662. doi:
10.1007/s00203-020-01877-0. [PMID: 32274559] - A-Li Chai, Hai-Yan Ben, Wei-Tao Guo, Yan-Xia Shi, Xue-Wen Xie, Lei Li, Bao-Ju Li. Quantification of Viable Cells of Pseudomonas syringae pv. tomato in Tomato Seed Using Propidium Monoazide and a Real-Time PCR Assay.
Plant disease.
2020 Aug; 104(8):2225-2232. doi:
10.1094/pdis-11-19-2397-re. [PMID: 32452750] - Brandon Helfield, Xucai Chen, Simon C Watkins, Flordeliza S Villanueva. Transendothelial Perforations and the Sphere of Influence of Single-Site Sonoporation.
Ultrasound in medicine & biology.
2020 07; 46(7):1686-1697. doi:
10.1016/j.ultrasmedbio.2020.02.017. [PMID: 32402675] - Nisha Shrestha, Christopher A Thomas, Devon Richtsmeier, Andrew Bogard, Rebecca Hermann, Malyk Walker, Gamid Abatchev, Raquel J Brown, Daniel Fologea. Temporary Membrane Permeabilization via the Pore-Forming Toxin Lysenin.
Toxins.
2020 05; 12(5):. doi:
10.3390/toxins12050343. [PMID: 32456013] - Hehe Wang, William W Turechek. Detection of Viable Xanthomonas fragariae Cells in Strawberry Using Propidium Monoazide and Long-Amplicon Quantitative PCR.
Plant disease.
2020 Apr; 104(4):1105-1112. doi:
10.1094/pdis-10-19-2248-re. [PMID: 32040389] - Xinyu Liao, Donghong Liu, Tian Ding. Nonthermal Plasma Induces the Viable-but-Nonculturable State in Staphylococcus aureus via Metabolic Suppression and the Oxidative Stress Response.
Applied and environmental microbiology.
2020 02; 86(5):. doi:
10.1128/aem.02216-19. [PMID: 31836577] - Mamadou Bado Traore, Aidong Sun, Zhilin Gan, Hamidou Senou, Jacques Togo, Kankou Hadia Fofana. Antimicrobial capacity of ultrasound and ozone for enhancing bacterial safety on inoculated shredded green cabbage (Brassica oleracea var. capitata).
Canadian journal of microbiology.
2020 Feb; 66(2):125-137. doi:
10.1139/cjm-2019-0313. [PMID: 31697563] - Jennifer G Dankoff, Kyler B Pallister, Fermin E Guerra, Alexander J Parks, Kelly Gorham, Saul Mastandrea, Jovanka M Voyich, Tyler K Nygaard. Quantifying the Cytotoxicity of Staphyloccus aureus Against Human Polymorphonuclear Leukocytes.
Journal of visualized experiments : JoVE.
2020 01; ?(155):. doi:
10.3791/60681. [PMID: 31957747] - Gennaro Carotenuto, Andrea Genre. Fluorescent Staining of Arbuscular Mycorrhizal Structures Using Wheat Germ Agglutinin (WGA) and Propidium Iodide.
Methods in molecular biology (Clifton, N.J.).
2020; 2146(?):53-59. doi:
10.1007/978-1-0716-0603-2_5. [PMID: 32415595] - Melissa Dewulf, Cedric M Blouin. Study of Caveolae-Dependent Mechanoprotection in Human Muscle Cells Using Micropatterning and Live-Cell Microscopy.
Methods in molecular biology (Clifton, N.J.).
2020; 2169(?):189-196. doi:
10.1007/978-1-0716-0732-9_17. [PMID: 32548830] - Rong Cai, Li-Ning Wang, Jing-Jing Fan, Shang-Qi Geng, Yu-Ming Liu. New 4-N-phenylaminoquinoline derivatives as antioxidant, metal chelating and cholinesterase inhibitors for Alzheimer's disease.
Bioorganic chemistry.
2019 12; 93(?):103328. doi:
10.1016/j.bioorg.2019.103328. [PMID: 31600664] - Tanes I Lima, Dimitrius Santiago P S F Guimarães, André G Oliveira, Hygor Araujo, Carlos H G Sponton, Nadja C Souza-Pinto, Ângela Saito, Ana Carolina M Figueira, Soledad Palameta, Marcio Chaim Bajgelman, Andrea Calixto, Silas Pinto, Marcelo A Mori, Joey Orofino, Valentina Perissi, Adrienne Mottis, Johan Auwerx, Leonardo Reis Silveira. Opposing action of NCoR1 and PGC-1α in mitochondrial redox homeostasis.
Free radical biology & medicine.
2019 11; 143(?):203-208. doi:
10.1016/j.freeradbiomed.2019.08.006. [PMID: 31408725] - David Sadílek, Tomáš Urfus, Jitka Vilímová, Jiří Hadrava, Jan Suda. Nuclear Genome Size in Contrast to Sex Chromosome Number Variability in the Human Bed Bug, Cimex lectularius (Heteroptera: Cimicidae).
Cytometry. Part A : the journal of the International Society for Analytical Cytology.
2019 07; 95(7):746-756. doi:
10.1002/cyto.a.23729. [PMID: 30729668] - Kazuki Maeda, Tadashi Kunieda, Kentaro Tamura, Kyoko Hatano, Ikuko Hara-Nishimura, Tomoo Shimada. Identification of Periplasmic Root-Cap Mucilage in Developing Columella Cells of Arabidopsis thaliana.
Plant & cell physiology.
2019 Jun; 60(6):1296-1303. doi:
10.1093/pcp/pcz047. [PMID: 30892660] - Ganyu Gu, Andrea Ottesen, Samantha Bolten, Lan Wang, Yaguang Luo, Steve Rideout, Shuxia Lyu, Xiangwu Nou. Impact of routine sanitation on the microbiomes in a fresh produce processing facility.
International journal of food microbiology.
2019 Apr; 294(?):31-41. doi:
10.1016/j.ijfoodmicro.2019.02.002. [PMID: 30753997] - Anne Sicard, Marcus V Merfa, Michael Voeltz, Adam R Zeilinger, Leonardo De La Fuente, Rodrigo P P Almeida. Discriminating between viable and membrane-damaged cells of the plant pathogen Xylella fastidiosa.
PloS one.
2019; 14(8):e0221119. doi:
10.1371/journal.pone.0221119. [PMID: 31442247] - Lito E Papanicolas, Yanan Wang, Jocelyn M Choo, David L Gordon, Steve L Wesselingh, Geraint B Rogers. Optimisation of a propidium monoazide based method to determine the viability of microbes in faecal slurries for transplantation.
Journal of microbiological methods.
2019 01; 156(?):40-45. doi:
10.1016/j.mimet.2018.12.001. [PMID: 30529117] - G E Yan, Thomas Efferth. Cell Harvesting Methods Affect Cellular Integrity of Adherent Cells During Apoptosis Detection.
Anticancer research.
2018 Dec; 38(12):6669-6672. doi:
10.21873/anticanres.13034. [PMID: 30504375] - Alisa Komsky-Elbaz, Zvi Roth. Fluorimetric Techniques for the Assessment of Sperm Membranes.
Journal of visualized experiments : JoVE.
2018 11; ?(141):. doi:
10.3791/58622. [PMID: 30582597] - Yuan Yuan, Guolu Zheng, Mengshi Lin, Azlin Mustapha. Detection of viable Escherichia coli in environmental water using combined propidium monoazide staining and quantitative PCR.
Water research.
2018 11; 145(?):398-407. doi:
10.1016/j.watres.2018.08.044. [PMID: 30173100] - Wei-De Wu, Pin-Shern Chen, Hany A Omar, El-Shaimaa A Arafa, Hung-Wei Pan, Jingyueh Jeng, Jui-Hsiang Hung. Antrodia cinnamomea boosts the anti-tumor activity of sorafenib in xenograft models of human hepatocellular carcinoma.
Scientific reports.
2018 08; 8(1):12914. doi:
10.1038/s41598-018-31209-8. [PMID: 30150684] - Roland Benz, Michel R Popoff. Clostridium perfringens Enterotoxin: The Toxin Forms Highly Cation-Selective Channels in Lipid Bilayers.
Toxins.
2018 08; 10(9):. doi:
10.3390/toxins10090341. [PMID: 30135397] - Ning Zhang, Yuxuan Fan, Chen Li, Qiming Wang, Noppol Leksawasdi, Fuli Li, Shi'an Wang. Cell permeability and nuclear DNA staining by propidium iodide in basidiomycetous yeasts.
Applied microbiology and biotechnology.
2018 May; 102(9):4183-4191. doi:
10.1007/s00253-018-8906-8. [PMID: 29572560] - Agostina B Sassone, Alicia López, Diego H Hojsgaard, Liliana M Giussani. A novel indicator of karyotype evolution in the tribe Leucocoryneae (Allioideae, Amaryllidaceae).
Journal of plant research.
2018 Mar; 131(2):211-223. doi:
10.1007/s10265-017-0987-4. [PMID: 29075953] - Rodrigo Pinheiro Araldi, Maristela Oliveira Dos Santos, Fabiane Faria Barbon, Bruna Aparecida Manjerona, Bruno Rosa Meirelles, Pedro de Oliva Neto, Pedro Ismael da Silva, Lucinéia Dos Santos, Isabel Cristina Cherici Camargo, Edislane Barreiros de Souza. Analysis of antioxidant, cytotoxic and mutagenic potential of Agave sisalana Perrine extracts using Vero cells, human lymphocytes and mice polychromatic erythrocytes.
Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.
2018 Feb; 98(?):873-885. doi:
10.1016/j.biopha.2018.01.022. [PMID: 29571258] - Shilin Li, Sarah Pasquin, Hoda M Eid, Jean-François Gauchat, Ammar Saleem, Pierre S Haddad. Anti-apoptotic potential of several antidiabetic medicinal plants of the eastern James Bay Cree pharmacopeia in cultured kidney cells.
BMC complementary and alternative medicine.
2018 Jan; 18(1):37. doi:
10.1186/s12906-018-2104-1. [PMID: 29378549] - Sining Han, Na Jiang, Qingyang Lv, Yumin Kan, Jianjun Hao, Jianqiang Li, Laixin Luo. Detection of Clavibacter michiganensis subsp. michiganensis in viable but nonculturable state from tomato seed using improved qPCR.
PloS one.
2018; 13(5):e0196525. doi:
10.1371/journal.pone.0196525. [PMID: 29723290] - Thomas Jäger, Johannes Alexander, Silke Kirchen, Andreas Dötsch, Arne Wieland, Christian Hiller, Thomas Schwartz. Live-dead discrimination analysis, qPCR assessment for opportunistic pathogens, and population analysis at ozone wastewater treatment plants.
Environmental pollution (Barking, Essex : 1987).
2018 Jan; 232(?):571-579. doi:
10.1016/j.envpol.2017.09.089. [PMID: 29032906] - Laura Seidel, Martin Strathmann, Andreas Nocker. The feasibility of improved live-dead distinction in qPCR-based microbial source tracking.
Journal of microbiological methods.
2017 09; 140(?):23-31. doi:
10.1016/j.mimet.2017.06.013. [PMID: 28625705] - Dae Gyu Yun, Dong Gun Lee. Assessment of silibinin as a potential antifungal agent and investigation of its mechanism of action.
IUBMB life.
2017 08; 69(8):631-637. doi:
10.1002/iub.1647. [PMID: 28636236] - S H S Dananjaya, R M C Udayangani, Sang Yeop Shin, M Edussuriya, Chamilani Nikapitiya, Jehee Lee, Mahanama De Zoysa. In vitro and in vivo antifungal efficacy of plant based lawsone against Fusarium oxysporum species complex.
Microbiological research.
2017 Aug; 201(?):21-29. doi:
10.1016/j.micres.2017.04.011. [PMID: 28602398] - Ru Li, Hein Min Tun, Musarrat Jahan, Zhengxiao Zhang, Ayush Kumar, W G Dilantha Fernando, Annemieke Farenhorst, Ehsan Khafipour. Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water.
Scientific reports.
2017 07; 7(1):5752. doi:
10.1038/s41598-017-02516-3. [PMID: 28720878] - Ankita Singh Chakotiya, Ankit Tanwar, Alka Narula, Rakesh Kumar Sharma. Zingiber officinale: Its antibacterial activity on Pseudomonas aeruginosa and mode of action evaluated by flow cytometry.
Microbial pathogenesis.
2017 Jun; 107(?):254-260. doi:
10.1016/j.micpath.2017.03.029. [PMID: 28389345] - Camila Longhi Macarrão, André Luis Lacerda Bachi, Mario Mariano, Lucia Jamli Abel. Effects of drinking desalinated seawater on cell viability and proliferation.
Journal of water and health.
2017 Jun; 15(3):360-366. doi:
10.2166/wh.2017.252. [PMID: 28598340] - Lin Jiajia, Mak Shinghung, Zheng Jiacheng, Wang Jialing, Xu Dilin, Hu Shengquan, Zhang Zaijun, Wang Qinwen, Han Yifan, Cui Wei. Assessment of Neuronal Viability Using Fluorescein Diacetate-Propidium Iodide Double Staining in Cerebellar Granule Neuron Culture.
Journal of visualized experiments : JoVE.
2017 05; ?(123):. doi:
10.3791/55442. [PMID: 28518109] - N N Mehlomakulu, K J Prior, M E Setati, B Divol. Candida pyralidae killer toxin disrupts the cell wall of Brettanomyces bruxellensis in red grape juice.
Journal of applied microbiology.
2017 Mar; 122(3):747-758. doi:
10.1111/jam.13383. [PMID: 27992098] - Heung-Shick Lee, Younhee Kim. Paeonia lactiflora Inhibits Cell Wall Synthesis and Triggers Membrane Depolarization in Candida albicans.
Journal of microbiology and biotechnology.
2017 Feb; 27(2):395-404. doi:
10.4014/jmb.1611.11064. [PMID: 28100900] - S Y Youn, O M Jeong, B K Choi, S C Jung, M S Kang. Application of loop-mediated isothermal amplification with propidium monoazide treatment to detect live Salmonella in chicken carcasses.
Poultry science.
2017 Feb; 96(2):458-464. doi:
10.3382/ps/pew341. [PMID: 27665018] - Junlong Wang, Xiaoping Yang, Aijuan Bao, Xinlong Liu, Junyuan Zeng, Xiurong Liu, Jian Yao, Ji Zhang, Ziqiang Lei. Microwave-assisted synthesis, structure and anti-tumor activity of selenized Artemisia sphaerocephala polysaccharide.
International journal of biological macromolecules.
2017 Feb; 95(?):1108-1118. doi:
10.1016/j.ijbiomac.2016.10.101. [PMID: 27810352] - Elena Fernández-Miranda, Juan Majada, Abelardo Casares. Efficacy of propidium iodide and FUN-1 stains for assessing viability in basidiospores of Rhizopogon roseolus.
Mycologia.
2017; 109(2):350-358. doi:
10.1080/00275514.2017.1323465. [PMID: 28513294] - Gregory R Young, Darren L Smith, Nicholas D Embleton, Janet E Berrington, Edward C Schwalbe, Stephen P Cummings, Christopher J van der Gast, Clare Lanyon. Reducing Viability Bias in Analysis of Gut Microbiota in Preterm Infants at Risk of NEC and Sepsis.
Frontiers in cellular and infection microbiology.
2017; 7(?):237. doi:
10.3389/fcimb.2017.00237. [PMID: 28634574] - Richard J Kibbee, Banu Örmeci. Development of a sensitive and false-positive free PMA-qPCR viability assay to quantify VBNC Escherichia coli and evaluate disinfection performance in wastewater effluent.
Journal of microbiological methods.
2017 01; 132(?):139-147. doi:
10.1016/j.mimet.2016.12.004. [PMID: 27932085] - Sarika Pathak-Sharma, Xiaoli Zhang, Jonathan G T Lam, Noah Weisleder, Stephanie M Seveau. High-Throughput Microplate-Based Assay to Monitor Plasma Membrane Wounding and Repair.
Frontiers in cellular and infection microbiology.
2017; 7(?):305. doi:
10.3389/fcimb.2017.00305. [PMID: 28770170] - Mario Coiro, Elisabeth Truernit. Xylem Characterization Using Improved Pseudo-Schiff Propidium Iodide Staining of Whole Mount Samples and Confocal Laser-Scanning Microscopy.
Methods in molecular biology (Clifton, N.J.).
2017; 1544(?):127-132. doi:
10.1007/978-1-4939-6722-3_11. [PMID: 28050834] - David Blasco-Escámez, Fidel Lozano-Elena, Norma Fàbregas, Ana I Caño-Delgado. The Primary Root of Sorghum bicolor (L. Moench) as a Model System to Study Brassinosteroid Signaling in Crops.
Methods in molecular biology (Clifton, N.J.).
2017; 1564(?):181-192. doi:
10.1007/978-1-4939-6813-8_15. [PMID: 28124255] - Daishi Chen, Ilker Y Eyupoglu, Nicolai Savaskan. Ferroptosis and Cell Death Analysis by Flow Cytometry.
Methods in molecular biology (Clifton, N.J.).
2017; 1601(?):71-77. doi:
10.1007/978-1-4939-6960-9_6. [PMID: 28470518] - Ankit Tanwar, Raman Chawla, Ankita Singh Chakotiya, Pallavi Thakur, Rajeev Goel, Mitra Basu, Rajesh Arora, Haider Ali Khan. Effect of Holarrhena antidysentrica (Ha) and Andrographis paniculata (Ap) on the biofilm formation and cell membrane integrity of opportunistic pathogen Salmonella typhimurium.
Microbial pathogenesis.
2016 Dec; 101(?):76-82. doi:
10.1016/j.micpath.2016.11.001. [PMID: 27836761] - Yusuke Imagawa, Tatsuya Saitoh, Yoshihide Tsujimoto. Vital staining for cell death identifies Atg9a-dependent necrosis in developmental bone formation in mouse.
Nature communications.
2016 11; 7(?):13391. doi:
10.1038/ncomms13391. [PMID: 27811852] - Xuening Wang, Jonathan S Harrison, George P Studzinski. Enhancement of arabinocytosine (AraC) toxicity to AML cells by a differentiation agent combination.
The Journal of steroid biochemistry and molecular biology.
2016 11; 164(?):72-78. doi:
10.1016/j.jsbmb.2015.08.023. [PMID: 26319201] - Lisa C Crowley, Brooke J Marfell, Adrian P Scott, Nigel J Waterhouse. Quantitation of Apoptosis and Necrosis by Annexin V Binding, Propidium Iodide Uptake, and Flow Cytometry.
Cold Spring Harbor protocols.
2016 11; 2016(11):. doi:
10.1101/pdb.prot087288. [PMID: 27803250] - Jody C Cantu, Melissa Tarango, Hope T Beier, Bennett L Ibey. The biological response of cells to nanosecond pulsed electric fields is dependent on plasma membrane cholesterol.
Biochimica et biophysica acta.
2016 11; 1858(11):2636-2646. doi:
10.1016/j.bbamem.2016.07.006. [PMID: 27431479] - P Gyawali, W Ahmed, J P S Sidhu, S V Nery, A C Clements, R Traub, J S McCarthy, S Llewellyn, P Jagals, S Toze. Quantitative detection of viable helminth ova from raw wastewater, human feces, and environmental soil samples using novel PMA-qPCR methods.
Environmental science and pollution research international.
2016 Sep; 23(18):18639-48. doi:
10.1007/s11356-016-7039-9. [PMID: 27306209] - Shengyong Yin, Xinhua Chen, Haiyang Xie, Lin Zhou, Danjing Guo, Yuning Xu, Liming Wu, Shusen Zheng. Nanosecond pulsed electric field (nsPEF) enhance cytotoxicity of cisplatin to hepatocellular cells by microdomain disruption on plasma membrane.
Experimental cell research.
2016 08; 346(2):233-40. doi:
10.1016/j.yexcr.2016.06.018. [PMID: 27375200] - Chihiro Kanno, Sung-Sik Kang, Yasuyuki Kitade, Yojiro Yanagawa, Yoshiyuki Takahashi, Masashi Nagano. Simultaneous evaluation of plasma membrane integrity, acrosomal integrity, and mitochondrial membrane potential in bovine spermatozoa by flow cytometry.
Zygote (Cambridge, England).
2016 Aug; 24(4):529-36. doi:
10.1017/s0967199415000490. [PMID: 26369275] - Lisa C Crowley, Adrian P Scott, Brooke J Marfell, Jeanne A Boughaba, Grace Chojnowski, Nigel J Waterhouse. Measuring Cell Death by Propidium Iodide Uptake and Flow Cytometry.
Cold Spring Harbor protocols.
2016 07; 2016(7):. doi:
10.1101/pdb.prot087163. [PMID: 27371595] - Xiaoling Guo, Deliang Zhu, Ruiling Lian, Yuting Han, Yonglong Guo, Zhijie Li, Shibo Tang, Jiansu Chen. Matrigel and Activin A promote cell-cell contact and anti-apoptotic activity in cultured human retinal pigment epithelium cells.
Experimental eye research.
2016 06; 147(?):37-49. doi:
10.1016/j.exer.2016.04.021. [PMID: 27130547] - Beatriz Cancino-Faure, Roser Fisa, M Magdalena Alcover, Teresa Jimenez-Marco, Cristina Riera. Detection and Quantification of Viable and Nonviable Trypanosoma cruzi Parasites by a Propidium Monoazide Real-Time Polymerase Chain Reaction Assay.
The American journal of tropical medicine and hygiene.
2016 06; 94(6):1282-9. doi:
10.4269/ajtmh.15-0693. [PMID: 27139452] - Jiawen Ma, Yaoyu Feng, Yue Hu, Eric N Villegas, Lihua Xiao. Human infective potential of Cryptosporidium spp., Giardia duodenalis and Enterocytozoon bieneusi in urban wastewater treatment plant effluents.
Journal of water and health.
2016 Jun; 14(3):411-23. doi:
10.2166/wh.2016.192. [PMID: 27280607] - Huiping Yang, Jonathan Daly, Terrence R Tiersch. Determination of sperm concentration using flow cytometry with simultaneous analysis of sperm plasma membrane integrity in zebrafish Danio rerio.
Cytometry. Part A : the journal of the International Society for Analytical Cytology.
2016 04; 89(4):350-6. doi:
10.1002/cyto.a.22796. [PMID: 26580311] - Kiersun Jones, Dong Won Kim, Jean S Park, Chang Hyun Khang. Live-cell fluorescence imaging to investigate the dynamics of plant cell death during infection by the rice blast fungus Magnaporthe oryzae.
BMC plant biology.
2016 Mar; 16(?):69. doi:
10.1186/s12870-016-0756-x. [PMID: 27000073] - Sangpil Yoon, Min Gon Kim, Chi Tat Chiu, Jae Youn Hwang, Hyung Ham Kim, Yingxiao Wang, K Kirk Shung. Direct and sustained intracellular delivery of exogenous molecules using acoustic-transfection with high frequency ultrasound.
Scientific reports.
2016 Feb; 6(?):20477. doi:
10.1038/srep20477. [PMID: 26843283] - Emilie Hollville, Seamus J Martin. Measuring Apoptosis by Microscopy and Flow Cytometry.
Current protocols in immunology.
2016 Feb; 112(?):14.38.1-14.38.24. doi:
10.1002/0471142735.im1438s112. [PMID: 26836509] - Aline Longoni, Janaina Kolling, Tiago M dos Santos, João Paulo dos Santos, Jussemara Souza da Silva, Letícia Pettenuzzo, Carlos-Alberto Gonçalves, Adriano M de Assis, André Quincozes-Santos, Angela T S Wyse. 1,25-Dihydroxyvitamin D3 exerts neuroprotective effects in an ex vivo model of mild hyperhomocysteinemia.
International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience.
2016 Feb; 48(?):71-9. doi:
10.1016/j.ijdevneu.2015.11.005. [PMID: 26658316] - Andrei Smertenko, Panagiotis Moschou, Laining Zhang, Deirdre Fahy, Peter Bozhkov. Characterization of Cytokinetic Mutants Using Small Fluorescent Probes.
Methods in molecular biology (Clifton, N.J.).
2016; 1370(?):199-208. doi:
10.1007/978-1-4939-3142-2_15. [PMID: 26659964] - Norsharina Ismail, Maznah Ismail, Nur Hanisah Azmi, Muhammad Firdaus Abu Bakar, Hamidon Basri, Maizaton Atmadini Abdullah. Modulation of Hydrogen Peroxide-Induced Oxidative Stress in Human Neuronal Cells by Thymoquinone-Rich Fraction and Thymoquinone via Transcriptomic Regulation of Antioxidant and Apoptotic Signaling Genes.
Oxidative medicine and cellular longevity.
2016; 2016(?):2528935. doi:
10.1155/2016/2528935. [PMID: 26823946] - Jung-Hwan Lee, Kyoung-Nam Kim. Effects of a Nonthermal Atmospheric Pressure Plasma Jet on Human Gingival Fibroblasts for Biomedical Application.
BioMed research international.
2016; 2016(?):2876916. doi:
10.1155/2016/2876916. [PMID: 27597959] - The Hong Phong Nguyen, Vy T H Pham, Song Ha Nguyen, Vladimir Baulin, Rodney J Croft, Brian Phillips, Russell J Crawford, Elena P Ivanova. The Bioeffects Resulting from Prokaryotic Cells and Yeast Being Exposed to an 18 GHz Electromagnetic Field.
PloS one.
2016; 11(7):e0158135. doi:
10.1371/journal.pone.0158135. [PMID: 27391488] - Zheng Gong, M Matt Tang, Xueliang Wu, Nancy Phillips, Dariusz Galkowski, Gary A Jarvis, Huizhou Fan. Arginine- and Polyamine-Induced Lactic Acid Resistance in Neisseria gonorrhoeae.
PloS one.
2016; 11(1):e0147637. doi:
10.1371/journal.pone.0147637. [PMID: 26808268] - Minji Kim, Stefan Wuertz. Survival and persistence of host-associated Bacteroidales cells and DNA in comparison with Escherichia coli and Enterococcus in freshwater sediments as quantified by PMA-qPCR and qPCR.
Water research.
2015 Dec; 87(?):182-92. doi:
10.1016/j.watres.2015.09.014. [PMID: 26408951] - Rong Zhu, Chun-ge Zhang, Yang Liu, Zhi-qiang Yuan, Wei-liang Chen, Shu-di Yang, Ji-zhao Li, Wen-jing Zhu, Xiao-feng Zhou, Ben-gang You, Xue-nong Zhang. CD147 monoclonal antibody mediated by chitosan nanoparticles loaded with α-hederin enhances antineoplastic activity and cellular uptake in liver cancer cells.
Scientific reports.
2015 Dec; 5(?):17904. doi:
10.1038/srep17904. [PMID: 26639052] - H J Mulhall, A Cardnell, K F Hoettges, F H Labeed, M P Hughes. Apoptosis progression studied using parallel dielectrophoresis electrophysiological analysis and flow cytometry.
Integrative biology : quantitative biosciences from nano to macro.
2015 Nov; 7(11):1396-401. doi:
10.1039/c5ib00109a. [PMID: 26235126] - Véronique Mathieu, Aurélie Chantôme, Florence Lefranc, Alessio Cimmino, Walter Miklos, Verena Paulitschke, Thomas Mohr, Lucia Maddau, Alexander Kornienko, Walter Berger, Christophe Vandier, Antonio Evidente, Eric Delpire, Robert Kiss. Sphaeropsidin A shows promising activity against drug-resistant cancer cells by targeting regulatory volume increase.
Cellular and molecular life sciences : CMLS.
2015 Oct; 72(19):3731-46. doi:
10.1007/s00018-015-1902-6. [PMID: 25868554] - Kuan Zeng, Bao Ping Deng, Hui-Qi Jiang, Meng Wang, Ping Hua, Hong-Wu Zhang, Yu-Bin Deng, Yan-Qi Yang. Prostaglandin E₁ protects bone marrow-derived mesenchymal stem cells against serum deprivation-induced apoptosis.
Molecular medicine reports.
2015 Oct; 12(4):5723-9. doi:
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