amygdalose (BioDeep_00000395690)
Main id: BioDeep_00000015425
PANOMIX_OTCML-2023 BioNovoGene_Lab2019
Metabolite Card
Formula: C12H22O11 (342.11620619999997)
Chinese Names: β-龙胆二糖, 龙胆二糖
Spectrum Hits:
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Molecular Structure
SMILES: C(C1C(C(C(C(O1)OCC(C(C(C(C=O)O)O)O)O)O)O)O)O
InChI: InChI=1S/C12H22O11/c13-1-4(15)7(17)8(18)5(16)3-22-12-11(21)10(20)9(19)6(2-14)23-12/h1,4-12,14-21H,2-3H2/t4-,5+,6+,7+,8+,9+,10-,11+,12+/m0/s1
Description
6-O-b-D-Glucopyranosyl-D-glucose is a natural product found in Ascochyta medicaginicola, Ruta graveolens, and other organisms with data available.
β-Gentiobiose (Gentiobiose) is a naturally occurring oligosaccharin with a rapid turnover rate in ripening tomato fruit[1].
Synonyms
21 synonym names
(2R,3S,4R,5R)-2,3,4,5-Tetrahydroxy-6-(((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)hexanal; (2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yloxy)hexanal; (2R,3S,4R,5R)-2,3,4,5-TETRAHYDROXY-6-{[(2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)OXAN-2-YL]OXY}HEXANAL; (2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhexanal; (2R,4R,5S)-6-[[(2R,4R,5S)-3,4,5-Trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxane-2,3,4,5-tetrol; D-GLUCOSE, 6-O-.BETA.-D-GLUCOPYRANOSYL-; beta-D-Glucopyranosyl-(1-6)-D-Glucose; 6-O-.BETA.-D-GLUCOPYRANOSYL-D-GLUCOSE; E0A98C0D-7546-435E-9A5F-DB62F8C85889; 6-(.BETA.-D-GLUCOSIDO)-D-GLUCOSE; 6-O-b-D-Glucopyranosyl-D-glucose; Gentiobiose (open form); GENTIOBIOSE [MI]; UNII-HF30HB040V; B-Gentiobiose; β-Gentiobiose; d-gentiobiose; gentiobiose; HF30HB040V; amygdalose; Gentiobiose
Classification Terms
Related Pathways
Reactome(0)
BioCyc(0)
PlantCyc(0)
Biological Process
0 related biological process reactions.
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
1 organism taxonomy source information
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
Literature Reference
- Hideyuki Takahashi, Sayaka Kikuchi-Fujisaki, Chiharu Yoshida, Hidetoshi Yamada, Tetsuro Yamashita, Naotake Konno, Takumi Takeda. Gtgen3A, a novel plant GH3 β-glucosidase, modulates gentio-oligosaccharide metabolism in Gentiana.
The Biochemical journal.
2018 04; 475(7):1309-1322. doi:
10.1042/bcj20170866
. [PMID: 29581147] - Ayla Sant'Ana da Silva, Javier Freddy Molina, Ricardo Sposina Sobral Teixeira, Luis G Valdivieso Gelves, Elba P S Bon, Viridiana S Ferreira-Leitão. Synthesis of disaccharides using β-glucosidases from Aspergillus niger, A. awamori and Prunus dulcis.
Biotechnology letters.
2017 Nov; 39(11):1717-1723. doi:
10.1007/s10529-017-2409-z
. [PMID: 28766088] - Hideyuki Takahashi, Tomohiro Imamura, Naotake Konno, Takumi Takeda, Kohei Fujita, Teruko Konishi, Masahiro Nishihara, Hirofumi Uchimiya. The gentio-oligosaccharide gentiobiose functions in the modulation of bud dormancy in the herbaceous perennial Gentiana.
The Plant cell.
2014 Oct; 26(10):3949-63. doi:
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. [PMID: 25326293] - Tsuyoshi Miki, Otto Holst, Wolf-Dietrich Hardt. The bactericidal activity of the C-type lectin RegIIIβ against Gram-negative bacteria involves binding to lipid A.
The Journal of biological chemistry.
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Biochemical and biophysical research communications.
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. [PMID: 15133155] - Atsushi Taga, Yuka Yamamoto, Rie Maruyama, Susumu Honda. Search for serum protein-binding disaccharides and disaccharide-binding serum proteins by affinity capillary electrophoresis.
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. [PMID: 15004849] - Susanne Deininger, Andreas Stadelmaier, Sonja von Aulock, Siegfried Morath, Richard R Schmidt, Thomas Hartung. Definition of structural prerequisites for lipoteichoic acid-inducible cytokine induction by synthetic derivatives.
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. [PMID: 12176087] - Maria Hrmova, Ross De Gori, Brian J Smith, Jon K Fairweather, Hugues Driguez, Joseph N Varghese, Geoffrey B Fincher. Structural basis for broad substrate specificity in higher plant beta-D-glucan glucohydrolases.
The Plant cell.
2002 May; 14(5):1033-52. doi:
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. [PMID: 12034895] - J N Freund, F Gossé, F Raul. Derivatives of plant beta-glucans are hydrolyzed by intestinal lactase-phlorizin hydrolase of mammals.
Enzyme.
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. [PMID: 1806369] - A Irie, H Kubo, F Inagaki, M Hoshi. Ceramide dihexosides from the spermatozoa of the starfish, Asterias amurensis, consist of gentiobiosyl- cellobiosyl-, and lactosylceramide.
Journal of biochemistry.
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. [PMID: 2127275] - D Carrier, J B Giziewicz, D Moir, I C Smith, H C Jarrell. Dynamics and orientation of glycolipid headgroups by 2H-NMR: gentiobiose.
Biochimica et biophysica acta.
1989 Jul; 983(1):100-8. doi:
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. [PMID: 2758044] - R E Hall, A V Muchmore, J M Decker, R M Blaese. Induction of cytotoxic effector activity in the HL-60 promyelocytic cell line by incubation with phorbol myristate acetate: a model system of human spontaneous monocyte-mediated cytotoxicity.
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