amygdalose (BioDeep_00000395690)

Main id: BioDeep_00000015425

 

PANOMIX_OTCML-2023 BioNovoGene_Lab2019 Volatile Flavor Compounds


代谢物信息卡片


(2R,3S,4R,5R)-2,3,4,5-Tetrahydroxy-6-(((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)hexanal

化学式: C12H22O11 (342.11620619999997)
中文名称: β-龙胆二糖, 龙胆二糖
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C1C(C(C(C(O1)OCC(C(C(C(C=O)O)O)O)O)O)O)O)O
InChI: InChI=1S/C12H22O11/c13-1-4(15)7(17)8(18)5(16)3-22-12-11(21)10(20)9(19)6(2-14)23-12/h1,4-12,14-21H,2-3H2/t4-,5+,6+,7+,8+,9+,10-,11+,12+/m0/s1

描述信息

6-O-b-D-Glucopyranosyl-D-glucose is a natural product found in Ascochyta medicaginicola, Ruta graveolens, and other organisms with data available.
β-Gentiobiose (Gentiobiose) is a naturally occurring oligosaccharin with a rapid turnover rate in ripening tomato fruit[1].

同义名列表

21 个代谢物同义名

(2R,3S,4R,5R)-2,3,4,5-Tetrahydroxy-6-(((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)hexanal; (2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yloxy)hexanal; (2R,3S,4R,5R)-2,3,4,5-TETRAHYDROXY-6-{[(2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)OXAN-2-YL]OXY}HEXANAL; (2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhexanal; (2R,4R,5S)-6-[[(2R,4R,5S)-3,4,5-Trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxane-2,3,4,5-tetrol; D-GLUCOSE, 6-O-.BETA.-D-GLUCOPYRANOSYL-; beta-D-Glucopyranosyl-(1-6)-D-Glucose; 6-O-.BETA.-D-GLUCOPYRANOSYL-D-GLUCOSE; E0A98C0D-7546-435E-9A5F-DB62F8C85889; 6-(.BETA.-D-GLUCOSIDO)-D-GLUCOSE; 6-O-b-D-Glucopyranosyl-D-glucose; Gentiobiose (open form); GENTIOBIOSE [MI]; UNII-HF30HB040V; B-Gentiobiose; β-Gentiobiose; d-gentiobiose; gentiobiose; HF30HB040V; amygdalose; Gentiobiose



数据库引用编号

9 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。



文献列表

  • Hideyuki Takahashi, Sayaka Kikuchi-Fujisaki, Chiharu Yoshida, Hidetoshi Yamada, Tetsuro Yamashita, Naotake Konno, Takumi Takeda. Gtgen3A, a novel plant GH3 β-glucosidase, modulates gentio-oligosaccharide metabolism in Gentiana. The Biochemical journal. 2018 04; 475(7):1309-1322. doi: 10.1042/bcj20170866. [PMID: 29581147]
  • Ayla Sant'Ana da Silva, Javier Freddy Molina, Ricardo Sposina Sobral Teixeira, Luis G Valdivieso Gelves, Elba P S Bon, Viridiana S Ferreira-Leitão. Synthesis of disaccharides using β-glucosidases from Aspergillus niger, A. awamori and Prunus dulcis. Biotechnology letters. 2017 Nov; 39(11):1717-1723. doi: 10.1007/s10529-017-2409-z. [PMID: 28766088]
  • Hideyuki Takahashi, Tomohiro Imamura, Naotake Konno, Takumi Takeda, Kohei Fujita, Teruko Konishi, Masahiro Nishihara, Hirofumi Uchimiya. The gentio-oligosaccharide gentiobiose functions in the modulation of bud dormancy in the herbaceous perennial Gentiana. The Plant cell. 2014 Oct; 26(10):3949-63. doi: 10.1105/tpc.114.131631. [PMID: 25326293]
  • Tsuyoshi Miki, Otto Holst, Wolf-Dietrich Hardt. The bactericidal activity of the C-type lectin RegIIIβ against Gram-negative bacteria involves binding to lipid A. The Journal of biological chemistry. 2012 Oct; 287(41):34844-55. doi: 10.1074/jbc.m112.399998. [PMID: 22896700]
  • Takanobu Sakurai, Takumi Misaka, Yohei Ueno, Masaji Ishiguro, Shinji Matsuo, Yoshiro Ishimaru, Tomiko Asakura, Keiko Abe. The human bitter taste receptor, hTAS2R16, discriminates slight differences in the configuration of disaccharides. Biochemical and biophysical research communications. 2010 Nov; 402(4):595-601. doi: 10.1016/j.bbrc.2010.10.059. [PMID: 20965151]
  • Bruno A C Horta, Lovorka Perić-Hassler, Philippe H Hünenberger. Interaction of the disaccharides trehalose and gentiobiose with lipid bilayers: a comparative molecular dynamics study. Journal of molecular graphics & modelling. 2010 Nov; 29(3):331-46. doi: 10.1016/j.jmgm.2010.09.013. [PMID: 21115286]
  • Seyed Ahmad Mohajeri, Hossein Hosseinzadeh, Fariborz Keyhanfar, Javad Aghamohammadian. Extraction of crocin from saffron (Crocus sativus) using molecularly imprinted polymer solid-phase extraction. Journal of separation science. 2010 Aug; 33(15):2302-9. doi: 10.1002/jssc.201000183. [PMID: 20589782]
  • Agnieszka Swiatek, Walter Van Dongen, Eddy L Esmans, Harry Van Onckelen. Metabolic fate of jasmonates in tobacco bright yellow-2 cells. Plant physiology. 2004 May; 135(1):161-72. doi: 10.1104/pp.104.040501. [PMID: 15133155]
  • Atsushi Taga, Yuka Yamamoto, Rie Maruyama, Susumu Honda. Search for serum protein-binding disaccharides and disaccharide-binding serum proteins by affinity capillary electrophoresis. Electrophoresis. 2004 Mar; 25(6):876-81. doi: 10.1002/elps.200305765. [PMID: 15004849]
  • Susanne Deininger, Andreas Stadelmaier, Sonja von Aulock, Siegfried Morath, Richard R Schmidt, Thomas Hartung. Definition of structural prerequisites for lipoteichoic acid-inducible cytokine induction by synthetic derivatives. Journal of immunology (Baltimore, Md. : 1950). 2003 Apr; 170(8):4134-8. doi: 10.4049/jimmunol.170.8.4134. [PMID: 12682244]
  • A Ozaki, M Kitano, N Furusawa, H Yamaguchi, K Kuroda, G Endo. Genotoxicity of gardenia yellow and its components. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 2002 Nov; 40(11):1603-10. doi: 10.1016/s0278-6915(02)00118-7. [PMID: 12176087]
  • Maria Hrmova, Ross De Gori, Brian J Smith, Jon K Fairweather, Hugues Driguez, Joseph N Varghese, Geoffrey B Fincher. Structural basis for broad substrate specificity in higher plant beta-D-glucan glucohydrolases. The Plant cell. 2002 May; 14(5):1033-52. doi: 10.1105/tpc.010442. [PMID: 12034895]
  • J N Freund, F Gossé, F Raul. Derivatives of plant beta-glucans are hydrolyzed by intestinal lactase-phlorizin hydrolase of mammals. Enzyme. 1991; 45(1-2):71-4. doi: 10.1159/000468868. [PMID: 1806369]
  • A Irie, H Kubo, F Inagaki, M Hoshi. Ceramide dihexosides from the spermatozoa of the starfish, Asterias amurensis, consist of gentiobiosyl- cellobiosyl-, and lactosylceramide. Journal of biochemistry. 1990 Oct; 108(4):531-6. doi: 10.1093/oxfordjournals.jbchem.a123237. [PMID: 2127275]
  • D Carrier, J B Giziewicz, D Moir, I C Smith, H C Jarrell. Dynamics and orientation of glycolipid headgroups by 2H-NMR: gentiobiose. Biochimica et biophysica acta. 1989 Jul; 983(1):100-8. doi: 10.1016/0005-2736(89)90385-4. [PMID: 2758044]
  • R E Hall, A V Muchmore, J M Decker, R M Blaese. Induction of cytotoxic effector activity in the HL-60 promyelocytic cell line by incubation with phorbol myristate acetate: a model system of human spontaneous monocyte-mediated cytotoxicity. Cellular immunology. 1983 Feb; 76(1):58-68. doi: 10.1016/0008-8749(83)90348-9. [PMID: 6572566]
  • M Thermann, W Lorenz, A Schmal, F Schingale, P Dormann, H Hamelmann. Alterations in the circulatory system of anaesthesized dogs following administration of histamine and histamine H1- and H2-Receptor antagonists in relation to plasma histamine levels. Agents and actions. 1975 Dec; 5(5):450-4. doi: 10.1007/bf01972666. [PMID: 3955]