Tricine (BioDeep_00000375383)

   

natural product


代谢物信息卡片


Tricine

化学式: C6H13NO5 (179.0794)
中文名称: 三(羟甲基)甲基甘氨酸
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C(=O)O)NC(CO)(CO)CO
InChI: InChI=1S/C6H13NO5/c8-2-6(3-9,4-10)7-1-5(11)12/h7-10H,1-4H2,(H,11,12)

描述信息

同义名列表

1 个代谢物同义名

Tricine



数据库引用编号

5 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

17 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表


文献列表

  • Arezou Masteri Farahani, Fariba Maleki, Nourollah Sadeghzadeh, Saeid Abediankenari, Seyed Mohammad Abedi, Mostafa Erfani. 99m Tc-(EDDA/tricine)-HYNIC-GnRH analogue as a potential imaging probe for diagnosis of prostate cancer. Chemical biology & drug design. 2020 08; 96(2):850-860. doi: 10.1111/cbdd.13693. [PMID: 32279449]
  • Syed R Haider, Helen J Reid, Barry L Sharp. Tricine-SDS-PAGE. Methods in molecular biology (Clifton, N.J.). 2019; 1855(?):151-160. doi: 10.1007/978-1-4939-8793-1_15. [PMID: 30426416]
  • Felix Neumaier, Isha Akhtar-Schäfer, Jan Niklas Lüke, Maxine Dibué-Adjei, Jürgen Hescheler, Toni Schneider. Reciprocal modulation of Cav 2.3 voltage-gated calcium channels by copper(II) ions and kainic acid. Journal of neurochemistry. 2018 11; 147(3):310-322. doi: 10.1111/jnc.14546. [PMID: 29972687]
  • Zahra Shaghaghi, Seyed Mohammad Abedi, Seyed Jalal Hosseinimehr. Tricine co-ligand improved the efficacy of 99mTc-HYNIC-(Ser)3-J18 peptide for targeting and imaging of non-small-cell lung cancer. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie. 2018 Aug; 104(?):325-331. doi: 10.1016/j.biopha.2018.05.037. [PMID: 29775901]
  • Sajjad Ahmadpour, Zohreh Noaparast, Seyed Mohammad Abedi, Seyed Jalal Hosseinimehr. 99mTc-HYNIC-(tricine/EDDA)-FROP peptide for MCF-7 breast tumor targeting and imaging. Journal of biomedical science. 2018 Feb; 25(1):17. doi: 10.1186/s12929-018-0420-x. [PMID: 29455647]
  • Fatemeh Khodadust, Sajjad Ahmadpour, Nazan Aligholikhamseh, Seyed Mohammad Abedi, Seyed Jalal Hosseinimehr. An improved 99mTc-HYNIC-(Ser)3-LTVSPWY peptide with EDDA/tricine as co-ligands for targeting and imaging of HER2 overexpression tumor. European journal of medicinal chemistry. 2018 Jan; 144(?):767-773. doi: 10.1016/j.ejmech.2017.12.037. [PMID: 29291444]
  • Yusang Ying, Luping Zhao, Lingzhi Kong, Xiangzhen Kong, Yufei Hua, Yeming Chen. Solubilization of proteins in extracted oil bodies by SDS: a simple and efficient protein sample preparation method for Tricine-SDS-PAGE. Food chemistry. 2015 Aug; 181(?):179-85. doi: 10.1016/j.foodchem.2015.02.088. [PMID: 25794737]
  • Mostafa Erfani, Mojtaba Shamsaei, Faiyaz Mohammadbaghery, Seyed Pezhman Shirmardi. Synthesis and evaluation of a 99mTc-labeled tubulin-binding agent for tumor imaging. Journal of labelled compounds & radiopharmaceuticals. 2014 May; 57(6):419-24. doi: 10.1002/jlcr.3200. [PMID: 24737145]
  • Hildo J K Ananias, Zilin Yu, Hilde D Hoving, Stefano Rosati, Rudi A Dierckx, Fan Wang, Yongjun Yan, Xiaoyuan Chen, Jan Pruim, Marjolijn N Lub-de Hooge, Wijnand Helfrich, Philip H Elsinga, Igle J de Jong. Application of (99m)Technetium-HYNIC(tricine/TPPTS)-Aca-Bombesin(7-14) SPECT/CT in prostate cancer patients: a first-in-man study. Nuclear medicine and biology. 2013 Oct; 40(7):933-8. doi: 10.1016/j.nucmedbio.2013.05.009. [PMID: 23891351]
  • Hana Konečná, Dana Fridrichová, Gabriela Lochmanová, Jan Bárta, Zbyněk Zdráhal. Preventing the mixed detergent micelle effect in two-dimensional electrophoresis on Tris-Tricine gels. Electrophoresis. 2013 Jul; 34(13):1969-71. doi: 10.1002/elps.201300084. [PMID: 23592323]
  • Maria S Jiménez, L Rodriguez, Juan R Bertolin, Maria T Gomez, Juan R Castillo. Evaluation of gel electrophoresis techniques and laser ablation-inductively coupled plasma-mass spectrometry for screening analysis of Zn and Cu-binding proteins in plankton. Analytical and bioanalytical chemistry. 2013 Jan; 405(1):359-68. doi: 10.1007/s00216-012-6461-1. [PMID: 23070043]
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  • Marta Opalinska, Tomasz Stompor, Dorota Pach, Renata Mikolajczak, Danuta Fedak, Marcin Krzanowski, Tomasz Rakowski, Anna Sowa-Staszczak, Boguslaw Glowa, Piotr Garnuszek, Michał Maurin, Urszula Karczmarczyk, Władysław Sulowicz, Alicja Hubalewska-Dydejczyk. Imaging of inflamed carotid artery atherosclerotic plaques with the use of 99mTc-HYNIC-IL-2 scintigraphy in end-stage renal disease patients. European journal of nuclear medicine and molecular imaging. 2012 Apr; 39(4):673-82. doi: 10.1007/s00259-011-2026-3. [PMID: 22237843]
  • Naoki Soga, Kazuhiko Kinosita, Masasuke Yoshida, Toshiharu Suzuki. Kinetic equivalence of transmembrane pH and electrical potential differences in ATP synthesis. The Journal of biological chemistry. 2012 Mar; 287(12):9633-9. doi: 10.1074/jbc.m111.335356. [PMID: 22253434]
  • Minu Joseph, M Dolors Ludevid, Margarita Torrent, Valérie Rofidal, Marc Tauzin, Michel Rossignol, Jean-Benoit Peltier. Proteomic characterisation of endoplasmic reticulum-derived protein bodies in tobacco leaves. BMC plant biology. 2012 Mar; 12(?):36. doi: 10.1186/1471-2229-12-36. [PMID: 22424442]
  • A Hernández-Cairo, A Perera-Pintado, A Prats-Capote, J F Batista-Cuellar, C Casacó-Santana. [Comparative study of the biodistribution of (99m)Tc-HYNIC-Lys3-Bombesin obtained with the EDDA/tricine and NA/tricine as coligands]. Revista espanola de medicina nuclear e imagen molecular. 2012 Mar; 31(2):61-5. doi: 10.1016/j.remn.2011.09.005. [PMID: 22305264]
  • Emilie Wientjes, Roberta Croce. PMS: photosystem I electron donor or fluorescence quencher. Photosynthesis research. 2012 Mar; 111(1-2):185-91. doi: 10.1007/s11120-011-9671-z. [PMID: 21879310]
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  • Patricia Coello, Emi Hirano, Sandra J Hey, Nira Muttucumaru, Eleazar Martinez-Barajas, Martin A J Parry, Nigel G Halford. Evidence that abscisic acid promotes degradation of SNF1-related protein kinase (SnRK) 1 in wheat and activation of a putative calcium-dependent SnRK2. Journal of experimental botany. 2012 Jan; 63(2):913-24. doi: 10.1093/jxb/err320. [PMID: 21994172]
  • Venkateswarlu Yadavalli, Craig C Jolley, Chandramouli Malleda, Balakumar Thangaraj, Petra Fromme, Rajagopal Subramanyam. Alteration of proteins and pigments influence the function of photosystem I under iron deficiency from Chlamydomonas reinhardtii. PloS one. 2012; 7(4):e35084. doi: 10.1371/journal.pone.0035084. [PMID: 22514709]
  • Sandra Armengol Lopez, Kathleen M Botham, Charlotte Lawson. The oxidative state of chylomicron remnants influences their modulation of human monocyte activation. International journal of vascular medicine. 2012; 2012(?):942512. doi: 10.1155/2012/942512. [PMID: 21961069]
  • Morgane Riou, David Stroebel, J Michael Edwardson, Pierre Paoletti. An alternating GluN1-2-1-2 subunit arrangement in mature NMDA receptors. PloS one. 2012; 7(4):e35134. doi: 10.1371/journal.pone.0035134. [PMID: 22493736]
  • Marko Poglitsch, Oliver Domenig, Cornelia Schwager, Stefan Stranner, Bernhard Peball, Evelyne Janzek, Bettina Wagner, Helmut Jungwirth, Hans Loibner, Manfred Schuster. Recombinant Expression and Characterization of Human and Murine ACE2: Species-Specific Activation of the Alternative Renin-Angiotensin-System. International journal of hypertension. 2012; 2012(?):428950. doi: 10.1155/2012/428950. [PMID: 22518284]
  • Syed R Haider, Helen J Reid, Barry L Sharp. Tricine-SDS-PAGE. Methods in molecular biology (Clifton, N.J.). 2012; 869(?):81-91. doi: 10.1007/978-1-61779-821-4_8. [PMID: 22585479]
  • Rebecca L Smathers, Kristofer S Fritz, James J Galligan, Colin T Shearn, Philip Reigan, Michael J Marks, Dennis R Petersen. Characterization of 4-HNE modified L-FABP reveals alterations in structural and functional dynamics. PloS one. 2012; 7(6):e38459. doi: 10.1371/journal.pone.0038459. [PMID: 22701647]
  • Xiumin Fu, Wenbin Kong, Gang Peng, Jingyi Zhou, Muhammad Azam, Changjie Xu, Don Grierson, Kunsong Chen. Plastid structure and carotenogenic gene expression in red- and white-fleshed loquat (Eriobotrya japonica) fruits. Journal of experimental botany. 2012 Jan; 63(1):341-54. doi: 10.1093/jxb/err284. [PMID: 21994170]
  • Nikolaos E Ioannidis, Jeffrey A Cruz, Kiriakos Kotzabasis, David M Kramer. Evidence that putrescine modulates the higher plant photosynthetic proton circuit. PloS one. 2012; 7(1):e29864. doi: 10.1371/journal.pone.0029864. [PMID: 22253808]
  • Hai-Dong Yu, Xiao-Fei Yang, Si-Ting Chen, Yu-Ting Wang, Ji-Kai Li, Qi Shen, Xun-Liang Liu, Fang-Qing Guo. Downregulation of chloroplast RPS1 negatively modulates nuclear heat-responsive expression of HsfA2 and its target genes in Arabidopsis. PLoS genetics. 2012; 8(5):e1002669. doi: 10.1371/journal.pgen.1002669. [PMID: 22570631]
  • Mei-Qin Chen, Ai-Hong Zhang, Quan Zhang, Bao-Cai Zhang, Jie Nan, Xia Li, Na Liu, Hong Qu, Cong-Ming Lu, Sudmorgen, Yi-Hua Zhou, Zhi-Hong Xu, Shu-Nong Bai. Arabidopsis NMD3 is required for nuclear export of 60S ribosomal subunits and affects secondary cell wall thickening. PloS one. 2012; 7(4):e35904. doi: 10.1371/journal.pone.0035904. [PMID: 22558264]
  • Yan O Zubo, Victor V Kusnetsov, Thomas Börner, Karsten Liere. Reverse protection assay: a tool to analyze transcriptional rates from individual promoters. Plant methods. 2011 Dec; 7(1):47. doi: 10.1186/1746-4811-7-47. [PMID: 22185205]
  • Santiago J Ramírez-Aguilar, Mandy Keuthe, Marcio Rocha, Vadim V Fedyaev, Katharina Kramp, Kapuganti J Gupta, Allan G Rasmusson, Waltraud X Schulze, Joost T van Dongen. The composition of plant mitochondrial supercomplexes changes with oxygen availability. The Journal of biological chemistry. 2011 Dec; 286(50):43045-53. doi: 10.1074/jbc.m111.252544. [PMID: 22009743]
  • Grazia Biosa, Maria Filippa Addis, Alessandro Tanca, Salvatore Pisanu, Tonina Roggio, Sergio Uzzau, Daniela Pagnozzi. Comparison of blood serum peptide enrichment methods by Tricine SDS-PAGE and mass spectrometry. Journal of proteomics. 2011 Dec; 75(1):93-9. doi: 10.1016/j.jprot.2011.06.025. [PMID: 21757041]
  • Celine Diaz, Miyako Kusano, Ronan Sulpice, Mitsutaka Araki, Henning Redestig, Kazuki Saito, Mark Stitt, Ryoung Shin. Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes. BMC systems biology. 2011 Nov; 5(?):192. doi: 10.1186/1752-0509-5-192. [PMID: 22104211]
  • Gaurav Malviya, E F J de Vries, Rudi A Dierckx, Alberto Signore. Synthesis and evaluation of 99mTc-labelled monoclonal antibody 1D09C3 for molecular imaging of major histocompatibility complex class II protein expression. Molecular imaging and biology. 2011 Oct; 13(5):930-9. doi: 10.1007/s11307-010-0407-9. [PMID: 20812032]
  • Syed R Haider, Barry L Sharp, Helen J Reid. A comparison of Tris-glycine and Tris-tricine buffers for the electrophoretic separation of major serum proteins. Journal of separation science. 2011 Sep; 34(18):2463-7. doi: 10.1002/jssc.201100315. [PMID: 21818850]
  • Marike Marjolijn van Beuge, Jai Prakash, Marie Lacombe, Eduard Post, Catharina Reker-Smit, Leonie Beljaars, Klaas Poelstra. Increased liver uptake and reduced hepatic stellate cell activation with a cell-specific conjugate of the Rho-kinase inhibitor Y27632. Pharmaceutical research. 2011 Aug; 28(8):2045-54. doi: 10.1007/s11095-011-0430-9. [PMID: 21442374]
  • Inge Bulens, Bram Van de Poel, Maarten Latm Hertog, Maurice P De Proft, Annemie H Geeraerd, Bart M Nicolaï. Protocol: An updated integrated methodology for analysis of metabolites and enzyme activities of ethylene biosynthesis. Plant methods. 2011 Jun; 7(?):17. doi: 10.1186/1746-4811-7-17. [PMID: 21696643]
  • Yan Lu, David A Hall, Robert L Last. A small zinc finger thylakoid protein plays a role in maintenance of photosystem II in Arabidopsis thaliana. The Plant cell. 2011 May; 23(5):1861-75. doi: 10.1105/tpc.111.085456. [PMID: 21586683]
  • Roman Sobotka, Martin Tichy, Annegret Wilde, C Neil Hunter. Functional assignments for the carboxyl-terminal domains of the ferrochelatase from Synechocystis PCC 6803: the CAB domain plays a regulatory role, and region II is essential for catalysis. Plant physiology. 2011 Apr; 155(4):1735-47. doi: 10.1104/pp.110.167528. [PMID: 21081693]
  • Hongjuan Guo, Fang Xie, Meilin Zhu, Yan Li, Zhi Yang, Xuebin Wang, Jie Lu. The synthesis of pteroyl-lys conjugates and its application as Technetium-99m labeled radiotracer for folate receptor-positive tumor targeting. Bioorganic & medicinal chemistry letters. 2011 Apr; 21(7):2025-9. doi: 10.1016/j.bmcl.2011.02.014. [PMID: 21377880]
  • Jotham R Austin, L Andrew Staehelin. Three-dimensional architecture of grana and stroma thylakoids of higher plants as determined by electron tomography. Plant physiology. 2011 Apr; 155(4):1601-11. doi: 10.1104/pp.110.170647. [PMID: 21224341]
  • Alvina W M To, Elena M Ribe, Tsu Tshen Chuang, Joern E Schroeder, Simon Lovestone. The ε3 and ε4 alleles of human APOE differentially affect tau phosphorylation in hyperinsulinemic and pioglitazone treated mice. PloS one. 2011 Feb; 6(2):e16991. doi: 10.1371/journal.pone.0016991. [PMID: 21347323]
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