Thymine dimer (BioDeep_00000356088)
代谢物信息卡片
Thymine dimer
化学式: C10H12N4O4 (252.0859)
中文名称: 胸腺嘧啶二聚体
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: CC12C(=O)NC(O)=NC1C1N=C(O)NC(=O)C12C
InChI: InChI=1S/C10H12N4O4/c1-9-3(11-7(17)13-5(9)15)4-10(9,2)6(16)14-8(18)12-4/h3-4H,1-2H3,(H2,11,13,15,17)(H2,12,14,16,18)
数据库引用编号
5 个数据库交叉引用编号
- ChEBI: CHEBI:131824
- PubChem: 581481
- MeSH: Pyrimidine Dimers
- PMhub: MS000166121
- CAS: 3660-32-0
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
| 亚细胞结构定位 | 关联基因列表 |
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文献列表
- Momo Otake, Mika Teranishi, Chiharu Komatsu, Mamoru Hara, Kaoru Okamoto Yoshiyama, Jun Hidema. Poaceae plants transfer cyclobutane pyrimidine dimer photolyase to chloroplasts for ultraviolet-B resistance.
Plant physiology.
2024 Apr; 195(1):326-342. doi:
10.1093/plphys/kiae060. [PMID: 38345835] - Sezgi Kaya, Dugcar Ebrar Erdogan, Aziz Sancar, Ogun Adebali, Onur Oztas. Global repair is the primary nucleotide excision repair subpathway for the removal of pyrimidine-pyrimidone (6-4) damage from the Arabidopsis genome.
Scientific reports.
2024 02; 14(1):3308. doi:
10.1038/s41598-024-53472-8. [PMID: 38332020] - Monireh Saeid Nia, Christine Desel, Frauke Pescheck, Karin Krupinska, Wolfgang Bilger. WHIRLY1-deficient chloroplasts display enhanced formation of cyclobutane pyrimidine dimers during exposure to UV-B radiation.
Physiologia plantarum.
2023 Sep; 175(5):e14049. doi:
10.1111/ppl.14049. [PMID: 37882276] - Gideon S Mmbando, Sugihiro Ando, Hideki Takahashi, Jun Hidema. High ultraviolet-B sensitivity due to lower CPD photolyase activity is needed for biotic stress response to the rice blast fungus, Magnaporthe oryzae.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.
2023 Jun; 22(6):1309-1321. doi:
10.1007/s43630-023-00379-4. [PMID: 36729358] - Sezgi Kaya, Ogun Adebali, Onur Oztas, Aziz Sancar. Genome-wide Excision Repair Map of Cyclobutane Pyrimidine Dimers in Arabidopsis and the Roles of CSA1 and CSA2 Proteins in Transcription-coupled Repair.
Photochemistry and photobiology.
2022 05; 98(3):707-712. doi:
10.1111/php.13519. [PMID: 34525225] - Huijuan Wang, Hongwei Liu, Qian Yu, Fenghua Fan, Shenghao Liu, Guihua Feng, Pengying Zhang. A CPD photolyase gene PnPHR1 from Antarctic moss Pohlia nutans is involved in the resistance to UV-B radiation and salinity stress.
Plant physiology and biochemistry : PPB.
2021 Oct; 167(?):235-244. doi:
10.1016/j.plaphy.2021.08.005. [PMID: 34385002] - Munehisa Nakamura, Tatsuo Nunoshiba, Keiichiro Hiratsu. Detection and analysis of UV-induced mutations in the chromosomal DNA of Arabidopsis.
Biochemical and biophysical research communications.
2021 05; 554(?):89-93. doi:
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Genes.
2020 12; 11(12):. doi:
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Current biology : CB.
2020 11; 30(22):4483-4490.e4. doi:
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Genes.
2020 11; 11(11):. doi:
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Scientific reports.
2020 02; 10(1):3158. doi:
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2018 09; 94(5):1026-1031. doi:
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2017 Aug; 173(?):196-203. doi:
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Proceedings of the National Academy of Sciences of the United States of America.
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The British journal of dermatology.
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Scientific reports.
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2016 10; 6(?):34569. doi:
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Physiologia plantarum.
2016 Oct; 158(2):236-53. doi:
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Oecologia.
2016 08; 181(4):1069-82. doi:
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Journal of plant physiology.
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2016 Apr; 113(17):4706-10. doi:
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The Journal of investigative dermatology.
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The Plant journal : for cell and molecular biology.
2014 Sep; 79(6):951-63. doi:
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Environmental microbiology.
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2012 Aug; 53(3):457-63. doi:
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Cutaneous and ocular toxicology.
2009; 28(2):54-60. doi:
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Proceedings of the National Academy of Sciences of the United States of America.
2008 Dec; 105(52):21023-7. doi:
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Photodermatology, photoimmunology & photomedicine.
2008 Aug; 24(4):175-82. doi:
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Journal of radiation research.
2008 Mar; 49(2):189-96. doi:
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Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.
2008 Mar; 7(3):311-20. doi:
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2007 Oct; 33(5):441-8. doi:
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DNA repair.
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Genes & genetic systems.
2007 Aug; 82(4):311-9. doi:
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The Plant journal : for cell and molecular biology.
2007 Apr; 50(1):70-9. doi:
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Archives of dermatology.
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The Journal of investigative dermatology.
2007 Jan; 127(1):222-32. doi:
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Proceedings of the National Academy of Sciences of the United States of America.
2006 Nov; 103(47):17696-700. doi:
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Mutation research.
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Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.
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Phytotherapy research : PTR.
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Methods in molecular biology (Clifton, N.J.).
2006; 314(?):215-28. doi:
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Methods in molecular biology (Clifton, N.J.).
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Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology.
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Genetics.
2005 Dec; 171(4):1941-50. doi:
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Aging cell.
2005 Oct; 4(5):247-55. doi:
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The Plant journal : for cell and molecular biology.
2005 Jul; 43(1):57-67. doi:
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FEBS letters.
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DNA repair.
2005 Feb; 4(2):211-20. doi:
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Plant & cell physiology.
2004 Dec; 45(12):1848-56. doi:
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Skin pharmacology and physiology.
2004 Jan; 17(1):42-8. doi:
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Nucleic acids research.
2004; 32(9):2760-7. doi:
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Phytochemistry.
2003 Sep; 64(1):243-55. doi:
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Nature.
2003 Aug; 424(6952):1083-7. doi:
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Marine biotechnology (New York, N.Y.).
2003 Mar; 5(2):194-200. doi:
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Free radical biology & medicine.
2003 Jan; 34(2):218-25. doi:
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Oncogene.
2002 Dec; 21(58):9043-56. doi:
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Cancer letters.
2002 Nov; 185(1):21-9. doi:
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Journal of photochemistry and photobiology. B, Biology.
2002 Nov; 68(2-3):79-87. doi:
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Plant physiology.
2002 May; 129(1):64-71. doi:
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Journal of experimental botany.
2002 May; 53(371):1005-15. doi:
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Plant & cell physiology.
2002 Mar; 43(3):342-9. doi:
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Journal of photochemistry and photobiology. B, Biology.
2002 Feb; 66(1):67-72. doi:
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