Ginsenoside Rd (BioDeep_00000299386)
Main id: BioDeep_00000000031
natural product PANOMIX_OTCML-2023
代谢物信息卡片
化学式: C48H82O18 (946.5500872)
中文名称: 人参皂甙 Rd
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C(C1)(O)C(C([H])6C(C)(CCC=C(C)C)OC(C(O)7)OC(CO)C(C(O)7)O)([H])C(C)(CC6)C(C)(C5)C1(C(C2)(C)C(C5)(C(C)(C)C(OC(O3)(C(OC([H])(C(O)4)OC(C(O)C4O)CO)C(O)C(C3CO)O)[H])C2)[H])[H]
InChI: InChI=1S/C48H82O18/c1-22(2)10-9-14-48(8,66-42-39(60)36(57)33(54)26(20-50)62-42)23-11-16-47(7)31(23)24(52)18-29-45(5)15-13-30(44(3,4)28(45)12-17-46(29,47)6)64-43-40(37(58)34(55)27(21-51)63-43)65-41-38(59)35(56)32(53)25(19-49)61-41/h10,23-43,49-60H,9,11-21H2,1-8H3/t23-,24+,25+,26+,27+,28-,29+,30-,31-,32+,33+,34+,35-,36-,37-,38+,39+,40+,41-,42-,43-,45-,46+,47+,48-/m0/s1
描述信息
Ginsenoside Rd inhibits TNFα-induced NF-κB transcriptional activity with an IC50 of 12.05±0.82 μM in HepG2 cells. Ginsenoside Rd inhibits expression of COX-2 and iNOS mRNA. Ginsenoside Rd also inhibits Ca2+ influx. Ginsenoside Rd inhibits CYP2D6, CYP1A2, CYP3A4, and CYP2C9, with IC50s of 58.0±4.5 μM, 78.4±5.3 μM, 81.7±2.6 μM, and 85.1±9.1 μM, respectively.
Ginsenoside Rd inhibits TNFα-induced NF-κB transcriptional activity with an IC50 of 12.05±0.82 μM in HepG2 cells. Ginsenoside Rd inhibits expression of COX-2 and iNOS mRNA. Ginsenoside Rd also inhibits Ca2+ influx. Ginsenoside Rd inhibits CYP2D6, CYP1A2, CYP3A4, and CYP2C9, with IC50s of 58.0±4.5 μM, 78.4±5.3 μM, 81.7±2.6 μM, and 85.1±9.1 μM, respectively.
同义名列表
3 个代谢物同义名
2-[(4,5-dihydroxy-2-{[16-hydroxy-2,6,6,10,11-pentamethyl-14-(6-methyl-2-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}hept-5-en-2-yl)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-5-yl]oxy}-6-(hydroxymethyl)oxan-3-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol; Gypenoside VIII; Ginsenoside Rd
数据库引用编号
17 个数据库交叉引用编号
- PubChem: 3036963 CID:11679800
- PubChem: 3036963
- Metlin: METLIN91017
- CAS: 52705-93-8
- MoNA: PM003303
- MoNA: PM003604
- MoNA: PM011421
- MoNA: PM007911
- MoNA: PM003119
- MoNA: PM004707
- MoNA: TY000109
- MoNA: TY000013
- MoNA: TY000003
- PMhub: MS000187334
- PMhub: MS000061429
- medchemexpress: HY-N0043
- LOTUS: LTS0110684
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
44 个相关的物种来源信息
- 13340 - Aralia: LTS0110684
- 82095 - Aralia elata: 10.1248/CPB.48.838
- 82095 - Aralia elata: LTS0110684
- 4050 - Araliaceae: LTS0110684
- 3650 - Cucurbitaceae: LTS0110684
- 2759 - Eukaryota: LTS0110684
- 182083 - Gynostemma: LTS0110684
- 182084 - Gynostemma pentaphyllum: 10.1021/NP034018+
- 182084 - Gynostemma pentaphyllum: 10.1021/NP0499012
- 182084 - Gynostemma pentaphyllum: LTS0110684
- 555433 - Gynostemma yixingense: 10.1016/J.FITOTE.2009.09.009
- 555433 - Gynostemma yixingense: LTS0110684
- 3398 - Magnoliopsida: LTS0110684
- 4053 - Panax: LTS0110684
- 4054 - Panax ginseng: 10.1248/CPB.49.442
- 4054 - Panax ginseng: 10.1248/CPB.55.1034
- 4054 - Panax ginseng: 10.1248/CPB.57.1412
- 4054 - Panax ginseng: 10.1248/CPB.57.283
- 4054 - Panax ginseng: 10.5012/BKCS.2010.31.5.1381
- 4054 - Panax ginseng: LTS0110684
- 4054 - Panax Ginseng C. A. Mey.: -
- 44685 - Panax japonicus: 10.1002/HLCA.201100085
- 44685 - Panax japonicus: 10.1021/NP0201117
- 44685 - Panax japonicus: 10.1021/NP100851S
- 44685 - Panax japonicus: 10.1248/CPB.30.4341
- 44685 - Panax japonicus: LTS0110684
- 44586 - Panax notoginseng: 10.1007/S11418-005-0027-X
- 44586 - Panax notoginseng: 10.1016/S0031-9422(99)00364-7
- 44586 - Panax notoginseng: 10.1021/NP030015L
- 44586 - Panax notoginseng: 10.1248/CPB.31.3205
- 44586 - Panax notoginseng: 10.3390/MOLECULES15118169
- 44586 - Panax notoginseng: LTS0110684
- 44586 - Panax Notoginseng (Burk.) F. H. Chen Ex C. Chow: -
- 44681 - Panax pseudoginseng: LTS0110684
- 229541 - Panax pseudoginseng subsp. pseudoginseng: 10.1248/CPB.48.889
- 229541 - Panax pseudoginseng subsp. pseudoginseng: LTS0110684
- 44588 - Panax quinquefolius: 10.1016/S0031-9422(03)00346-7
- 44588 - Panax quinquefolius: LTS0110684
- 106132 - Panax vietnamensis: 10.1021/NP000393F
- 106132 - Panax vietnamensis: LTS0110684
- 33090 - Plants: -
- 35493 - Streptophyta: LTS0110684
- 58023 - Tracheophyta: LTS0110684
- 33090 - Viridiplantae: LTS0110684
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。