Cer(t18:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) (BioDeep_00000215180)

   

human metabolite


代谢物信息卡片


(5R,6R,7Z,9Z,11E,13E,15S,17Z)-5,6,15-Trihydroxy-N-[(2S,3S,4S)-1,3,4-trihydroxyoctadecan-2-yl]icosa-7,9,11,13,17-pentaenimidate

化学式: C38H67NO7 (649.4917)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: [H][C@@](CO)(NC(=O)CCC[C@@H](O)[C@H](O)\C=C/C=C\C=C\C=C\[C@@H](O)C\C=C/CC)[C@H](O)[C@@H](O)CCCCCCCCCCCCCC
InChI: InChI=1S/C38H67NO7/c1-3-5-7-8-9-10-11-12-13-14-19-23-28-36(44)38(46)33(31-40)39-37(45)30-24-29-35(43)34(42)27-22-18-16-15-17-21-26-32(41)25-20-6-4-2/h6,15-18,20-22,26-27,32-36,38,40-44,46H,3-5,7-14,19,23-25,28-31H2,1-2H3,(H,39,45)/b17-15+,18-16-,20-6-,26-21+,27-22-/t32-,33-,34+,35+,36-,38-/m0/s1

描述信息

Cer(t18:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) is an oxidized ceramide (Cer). As all ceramides, oxidized ceramides are members of the class of compounds known as sphingolipids (SPs), or glycosylceramides. SPs are lipids containing a backbone of sphingoid bases (e.g. sphingosine or sphinganine) that are often covalently bound to a fatty acid derivative through N-acylation. SPs are found in cell membranes, particularly in peripheral nerve cells and the cells found in the central nervous system (including the brain and spinal cord). Sphingolipids are extremely versatile molecules that have functions controlling fundamental cellular processes such as cell division, differentiation, and cell death. Impairments associated with sphingolipid metabolism are associated with many common human diseases such as diabetes, various cancers, microbial infections, diseases of the cardiovascular and respiratory systems, Alzheimer’s disease and other neurological syndromes. The biosynthesis and catabolism of sphingolipids involves a large number of intermediate metabolites where many different enzymes are involved. Simple sphingolipids, which include the sphingoid bases and ceramides, make up the early products of the sphingolipid synthetic pathways, while complex sphingolipids may be formed by the addition of head groups to the ceramide template (Wikipedia). In humans, ceramides are phosphorylated to ceramide phosphates (CerPs) through the action of a specific ceramide kinase (CerK). Ceramide phosphates are important metabolites of ceramides as they act as a mediators of the inflammatory response. Ceramides are also one of the hydrolysis byproducts of sphingomyelins (SMs) through the action of the enzyme sphingomyelin phosphodiesterase, which has been identified in the subcellular fractions of human epidermis (PMID: 25935) and many other tissues. Ceramides can also be synthesized from serine and palmitate in a de novo pathway and are regarded as important cellular signals for inducing apoptosis (PMID: 14998372). Ceramides are key in the biosynthesis of glycosphingolipids and gangliosides. In terms of its appearance and structure, Cer(d18:1/22:1(13Z)) is a colorless solid that consists of an unsaturated 18-carbon sphingoid base with an attached unsaturated 13Z-docosenoyl fatty acid side chain. In most mammalian SPs, the 18-carbon sphingoid bases are predominant (PMID: 9759481).

同义名列表

3 个代谢物同义名

(5R,6R,7Z,9Z,11E,13E,15S,17Z)-5,6,15-Trihydroxy-N-[(2S,3S,4S)-1,3,4-trihydroxyoctadecan-2-yl]icosa-7,9,11,13,17-pentaenimidate; (5R,6R,7Z,9Z,11E,13E,15S,17Z)-5,6,15-trihydroxy-N-[(2S,3S,4S)-1,3,4-trihydroxyoctadecan-2-yl]icosa-7,9,11,13,17-pentaenamide; Cer(t18:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15))



数据库引用编号

1 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表


文献列表