Cucurbit[8]uril (BioDeep_00000177753)
human metabolite blood metabolite
代谢物信息卡片
化学式: C48H48N32O16 (1328.3925888)
中文名称: 葫芦脲[8]
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C1N2C3C4N(C2=O)CN5C6C7N(C5=O)CN8C9C2N(C8=O)CN5C8C\\%10N(C5=O)CN5C\\%11C\\%12N(C5=O)CN5C\\%13C\\%14N(C5=O)CN5C\\%15C\\%16N(C5=O)CN5C\\%17C(N1C5=O)N1CN3C(=O)N4CN6C(=O)N7CN9C(=O)N2CN8C(=O)N\\%10CN\\%11C(=O)N\\%12CN\\%13C(=O)N\\%14CN\\%15C(=O)N\\%16CN\\%17C1=O
InChI: InChI=1S/C48H48N32O16/c81-33-49-1-50-18-20-54(34(50)82)4-58-22-24-62(38(58)86)8-66-26-28-70(42(66)90)12-74-30-32-78(46(74)94)15-77-31-29-73(45(77)93)11-69-27-25-65(41(69)89)7-61-23-21-57(37(61)85)3-53(33)19-17(49)51-2-52(18)36(84)56(20)6-60(22)40(88)64(24)10-68(26)44(92)72(28)14-76(30)48(96)80(32)16-79(31)47(95)75(29)13-71(27)43(91)67(25)9-63(23)39(87)59(21)5-55(19)35(51)83/h17-32H,1-16H2
描述信息
同义名列表
3 个代谢物同义名
1,3,5,8,10,13,15,18,20,22,24,26,28,30,32,34,36,38,40,43,45,48,50,53,55,57,59,61,63,65,68,70-dotriacontaazapentacosacyclo[32.32.5.1^{3,70}.1^{5,8}.1^{10,13}.1^{15,18}.1^{32,35}.1^{36,68}.1^{40,43}.1^{45,48}.1^{50,53}.0^{2,69}.0^{6,65}.0^{7,63}.0^{11,61}.0^{12,59}.0^{16,57}.0^{17,55}.0^{20,52}.0^{22,51}.0^{24,47}.0^{26,46}.0^{28,42}.0^{30,41}.0^{38,77}]octacontane-21,25,29,33,37,56,60,64,67,72,74,75,76,78,79,80-hexadecone; CUCURBIT(8)URIL; Cucurbit[8]uril
数据库引用编号
5 个数据库交叉引用编号
- ChEBI: CHEBI:51433
- PubChem: 16133299
- HMDB: HMDB0250579
- chemspider: 17289892
- CAS: 259886-51-6
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
1 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Joana Krämer, Laura M Grimm, Chunting Zhong, Michael Hirtz, Frank Biedermann. A supramolecular cucurbit[8]uril-based rotaxane chemosensor for the optical tryptophan detection in human serum and urine.
Nature communications.
2023 01; 14(1):518. doi:
10.1038/s41467-023-36057-3. [PMID: 36720875] - Amrutha Prabodh, Stephan Sinn, Laura Grimm, Zsombor Miskolczy, Mónika Megyesi, László Biczók, Stefan Bräse, Frank Biedermann. Teaching indicators to unravel the kinetic features of host-guest inclusion complexes.
Chemical communications (Cambridge, England).
2020 Oct; 56(82):12327-12330. doi:
10.1039/d0cc03715j. [PMID: 32945328] - Gyan H Aryal, Kenneth W Hunter, Liming Huang. A supramolecular red to near-infrared fluorescent probe for the detection of drugs in urine.
Organic & biomolecular chemistry.
2018 10; 16(40):7425-7429. doi:
10.1039/c8ob02180e. [PMID: 30264061] - Ming Xu, Steven P Kelley, Timothy E Glass. A Multi-Component Sensor System for Detection of Amphiphilic Compounds.
Angewandte Chemie (International ed. in English).
2018 09; 57(39):12741-12744. doi:
10.1002/anie.201807221. [PMID: 30079457] - Sougata Datta, Santosh K Misra, Manik Lal Saha, Nabajit Lahiri, Janis Louie, Dipanjan Pan, Peter J Stang. Orthogonal self-assembly of an organoplatinum(II) metallacycle and cucurbit[8]uril that delivers curcumin to cancer cells.
Proceedings of the National Academy of Sciences of the United States of America.
2018 08; 115(32):8087-8092. doi:
10.1073/pnas.1803800115. [PMID: 30038010] - Naji Al-Dubaili, Khaled El-Tarabily, Na'il Saleh. Host-guest complexes of imazalil with cucurbit[8]uril and β-cyclodextrin and their effect on plant pathogenic fungi.
Scientific reports.
2018 02; 8(1):2839. doi:
10.1038/s41598-018-21156-9. [PMID: 29434320] - Fangfei Li, Anil K Gorle, Marie Ranson, Kara L Vine, Robert Kinobe, Marshall Feterl, Jeffrey M Warner, F Richard Keene, J Grant Collins, Anthony I Day. Probing the pharmacokinetics of cucurbit[7, 8 and 10]uril: and a dinuclear ruthenium antimicrobial complex encapsulated in cucurbit[10]uril.
Organic & biomolecular chemistry.
2017 May; 15(19):4172-4179. doi:
10.1039/c7ob00724h. [PMID: 28443914] - Emanuela Cavatorta, Mark L Verheijden, Wies van Roosmalen, Jens Voskuhl, Jurriaan Huskens, Pascal Jonkheijm. Functionalizing the glycocalyx of living cells with supramolecular guest ligands for cucurbit[8]uril-mediated assembly.
Chemical communications (Cambridge, England).
2016 Jun; 52(44):7146-9. doi:
10.1039/c6cc01693f. [PMID: 27169698] - Qianchun Zhang, Gongke Li, Xiaohua Xiao, Song Zhan, Yujuan Cao. Efficient and Selective Enrichment of Ultratrace Cytokinins in Plant Samples by Magnetic Perhydroxy-Cucurbit[8]uril Microspheres.
Analytical chemistry.
2016 Apr; 88(7):4055-62. doi:
10.1021/acs.analchem.6b00408. [PMID: 26977773] - Ralph P G Bosmans, Wouter E Hendriksen, Mark Verheijden, Rienk Eelkema, Pascal Jonkheijm, Jan H van Esch, Luc Brunsveld. Supramolecular Protein Immobilization on Lipid Bilayers.
Chemistry (Weinheim an der Bergstrasse, Germany).
2015 Dec; 21(50):18466-73. doi:
10.1002/chem.201502461. [PMID: 26527541] - Shrikrishnan Sankaran, Jasper van Weerd, Jens Voskuhl, Marcel Karperien, Pascal Jonkheijm. Photoresponsive Cucurbit[8]uril-Mediated Adhesion of Bacteria on Supported Lipid Bilayers.
Small (Weinheim an der Bergstrasse, Germany).
2015 Dec; 11(46):6187-96. doi:
10.1002/smll.201502471. [PMID: 26469773] - Karina Scholtbach, Ítalo Venegas, Cornelia Bohne, Denis Fuentealba. Time-resolved fluorescence anisotropy as a tool to study guest-cucurbit[n]uril-protein ternary supramolecular interactions.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.
2015 Apr; 14(4):842-52. doi:
10.1039/c4pp00479e. [PMID: 25683690] - Frank Biedermann, Werner M Nau. Noncovalent chirality sensing ensembles for the detection and reaction monitoring of amino acids, peptides, proteins, and aromatic drugs.
Angewandte Chemie (International ed. in English).
2014 May; 53(22):5694-9. doi:
10.1002/anie.201400718. [PMID: 24719396] - Chunxi Hou, Jiaxi Li, Linlu Zhao, Wei Zhang, Quan Luo, Zeyuan Dong, Jiayun Xu, Junqiu Liu. Construction of protein nanowires through cucurbit[8]uril-based highly specific host-guest interactions: an approach to the assembly of functional proteins.
Angewandte Chemie (International ed. in English).
2013 May; 52(21):5590-3. doi:
10.1002/anie.201300692. [PMID: 23606534] - Frank Biedermann, Einat Elmalem, Indrajit Ghosh, Werner M Nau, Oren A Scherman. Strongly fluorescent, switchable perylene bis(diimide) host-guest complexes with cucurbit[8]uril in water.
Angewandte Chemie (International ed. in English).
2012 Jul; 51(31):7739-43. doi:
10.1002/anie.201202385. [PMID: 22730071] - Wanhua Lei, Guoyu Jiang, Qianxiong Zhou, Baowen Zhang, Xuesong Wang. Greatly enhanced binding of a cationic porphyrin towards bovine serum albumin by cucurbit[8]uril.
Physical chemistry chemical physics : PCCP.
2010 Oct; 12(40):13255-60. doi:
10.1039/c001013h. [PMID: 20824256] - Chang-Feng Li, Li-Ming Du, Hui-Ming Zhang. Study on the inclusion interaction of cucurbit[n]urils with sanguinarine by spectrofluorimetry and its analytical application.
Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.
2010 Feb; 75(2):912-7. doi:
10.1016/j.saa.2009.12.036. [PMID: 20044304]