Deoxyribonucleic acid (BioDeep_00000175420)
human metabolite blood metabolite Volatile Flavor Compounds
代谢物信息卡片
[(5-amino-2-{[({[5-amino-2-(hydroxymethyl)oxolan-3-yl]oxy}(hydroxy)phosphoryl)oxy]methyl}oxolan-3-yl)oxy][(5-amino-3-hydroxyoxolan-2-yl)methoxy]phosphinic acid
化学式: C15H31N3O13P2 (523.1332056)
中文名称: 脱氧核糖核酸钠盐 (来自鲑鱼鱼白)
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C1C(C(OC1N)COP(=O)(O)OC2CC(OC2COP(=O)(O)OC3CC(OC3CO)N)N)O
InChI: InChI=1S/C15H31N3O13P2/c16-13-1-7(20)11(28-13)5-25-32(21,22)31-9-3-15(18)29-12(9)6-26-33(23,24)30-8-2-14(17)27-10(8)4-19/h7-15,19-20H,1-6,16-18H2,(H,21,22)(H,23,24)
描述信息
同义名列表
11 个代谢物同义名
[(5-amino-2-{[({[5-amino-2-(hydroxymethyl)oxolan-3-yl]oxy}(hydroxy)phosphoryl)oxy]methyl}oxolan-3-yl)oxy][(5-amino-3-hydroxyoxolan-2-yl)methoxy]phosphinic acid; {5-amino-2-[({[5-amino-2-(hydroxymethyl)oxolan-3-yl]oxy(hydroxy)phosphoryl}oxy)methyl]oxolan-3-yl}oxy((5-amino-3-hydroxyoxolan-2-yl)methoxy)phosphinic acid; deoxyribonucleic acid; DNA, double-stranded; DNA, double stranded; Double-stranded dna; Deoxyribonucleate; DS-DNA; DS DNA; DNA; DNA
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
1 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Yining Zhu, Shuting Sarah Cai, Jingyao Ma, Leonardo Cheng, Christine Wei, Ataes Aggarwal, Wu Han Toh, Charles Shin, Ruochen Shen, Jiayuan Kong, Shuming Alan Mao, Yeh-Hsing Lao, Kam W Leong, Hai-Quan Mao. Optimization of lipid nanoparticles for gene editing of the liver via intraduodenal delivery.
Biomaterials.
2024 Jul; 308(?):122559. doi:
10.1016/j.biomaterials.2024.122559. [PMID: 38583366] - Zhangmin Wang, Zuowei Yuan, Min Liu, Zhidong Liu, Ping Leng, Shijia Ding, Jinlin Guo, Juan Zhang. Soft interface confined DNA walker for sensitive and specific detection of SARS-CoV-2 variants.
Talanta.
2024 Jul; 274(?):126009. doi:
10.1016/j.talanta.2024.126009. [PMID: 38579420] - Diviya Santhanes, Huiming Zhang, Alex Wilkins, Robert John Aitken, Anne-Louise Gannon, Mingtao Liang. Engineering pH-sensitive dissolution of lipid-polymer nanoparticles by Eudragit integration impacts plasmid DNA (pDNA) transfection.
European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V.
2024 Jun; 199(?):114299. doi:
10.1016/j.ejpb.2024.114299. [PMID: 38643953] - Ashwaq H Batawi. Ginkgo biloba extract mitigates the neurotoxicity of AlCl3 in alzheimer rat's model: role of apolipoprotein E4 and clusterin genes in stimulating ROS generation and apoptosis.
The International journal of neuroscience.
2024 Jun; 134(1):34-44. doi:
10.1080/00207454.2022.2082968. [PMID: 35634646] - Yiping Li, Xiaolong Wang. The role of DNA and RNA guanosine oxidation in cardiovascular diseases.
Pharmacological research.
2024 Jun; 204(?):107187. doi:
10.1016/j.phrs.2024.107187. [PMID: 38657843] - Jiuyan Chen, Fang Li, Bowen Zhao, Jun Gu, Nicholas Michael Brejcha, Mattia Bartoli, Wei Zhang, Yiqun Zhou, Shiwei Fu, Justin B Domena, Alyan Zafar, Fuwu Zhang, Alberto Tagliaferro, Fulvia Verde, Fangliang Zhang, Yanbin Zhang, Roger M Leblanc. Gene Transfection Efficiency Improvement with Lipid Conjugated Cationic Carbon Dots.
ACS applied materials & interfaces.
2024 May; 16(21):27087-27101. doi:
10.1021/acsami.4c02614. [PMID: 38752799] - Adriana Coll De Peña, Daniel Zimmer, Everett Gutterman-Johns, Nicole M Chen, Anubhav Tripathi, Christina M Bailey-Hytholt. Electrophoretic Microfluidic Characterization of mRNA- and pDNA-Loaded Lipid Nanoparticles.
ACS applied materials & interfaces.
2024 May; 16(21):26984-26997. doi:
10.1021/acsami.4c00208. [PMID: 38753459] - Jinlin Wu, Xi Mei, Xiaoqin Zhan, Fang Liu, Dongfang Liu. Proximity hybridization based 'turn-on' DNA tweezers for accurate and enzyme-free small extracellular vesicle analysis.
Analytical methods : advancing methods and applications.
2024 May; 16(19):3118-3124. doi:
10.1039/d4ay00487f. [PMID: 38699853] - Daijin Li, Jie Chang, Yujue Wang, Xiaoye Du, Jing Xu, Jingang Cui, Teng Zhang, Yu Chen. Hyperoside mitigates photoreceptor degeneration in part by targeting cGAS and suppressing DNA-induced microglial activation.
Acta neuropathologica communications.
2024 May; 12(1):76. doi:
10.1186/s40478-024-01793-0. [PMID: 38755736] - Yuxin Bai, Pingyao Xu, Shi Li, Dongsheng Wang, Kaijiong Zhang, Dongming Zheng, Daifan Yue, Guiji Zhang, Shuya He, Yan Li, Haimin Zou, Yao Deng. Signal amplification strategy of DNA self-assembled biosensor and typical applications in pathogenic microorganism detection.
Talanta.
2024 May; 272(?):125759. doi:
10.1016/j.talanta.2024.125759. [PMID: 38350248] - Kian Kadan-Jamal, Aakash Jog, Marios Sophocleous, Tali Dotan, Polina Frumin, Tamar Kuperberg Goshen, Silvia Schuster, Adi Avni, Yosi Shacham-Diamand. Sensing of gene expression in live cells using electrical impedance spectroscopy and DNA-functionalized gold nanoparticles.
Biosensors & bioelectronics.
2024 May; 252(?):116041. doi:
10.1016/j.bios.2024.116041. [PMID: 38401280] - Leoni Abendstein, Willem E M Noteborn, Luc S Veenman, Douwe J Dijkstra, Fleur S van de Bovenkamp, Leendert A Trouw, Thomas H Sharp. DNA Nanostructure-Templated Antibody Complexes Provide Insights into the Geometric Requirements of Human Complement Cascade Activation.
Journal of the American Chemical Society.
2024 May; 146(19):13455-13466. doi:
10.1021/jacs.4c02772. [PMID: 38703132] - Mette Galsgaard Malle, Ping Song, Philipp M G Löffler, Nazmie Kalisi, Yan Yan, Julián Valero, Stefan Vogel, Jørgen Kjems. Programmable RNA Loading of Extracellular Vesicles with Toehold-Release Purification.
Journal of the American Chemical Society.
2024 May; 146(18):12410-12422. doi:
10.1021/jacs.3c13123. [PMID: 38669207] - Shuo Qi, Xiaoze Dong, Eslam M Hamed, Hongtao Jiang, Wenbo Cao, Sam Fong Yau Li, Zhouping Wang. Ratiometric Fluorescence Aptasensor of Allergen Protein Based on Multivalent Aptamer-Encoded DNA Flowers as Fluorescence Resonance Energy Transfer Platform.
Analytical chemistry.
2024 May; 96(18):6947-6957. doi:
10.1021/acs.analchem.3c05894. [PMID: 38656889] - Daniel Nisakar Meenakshi Sundaram, Remant Bahadur K C, Wei Fu, Hasan Uludağ. An optimized polymeric delivery system for piggyBac transposition.
Biotechnology and bioengineering.
2024 May; 121(5):1503-1517. doi:
10.1002/bit.28665. [PMID: 38372658] - Yinan Zhao, Wanting Ma, Kexin Tian, Zhe Wang, Xingxing Fu, Qi Zuo, Yanfei Qi, Shubiao Zhang. Sucrose ester embedded lipid carrier for DNA delivery.
European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V.
2024 May; 198(?):114269. doi:
10.1016/j.ejpb.2024.114269. [PMID: 38527635] - Yue Qin, Nadia Rouatbi, Julie Tzu-Wen Wang, Rafal Baker, James Spicer, Adam A Walters, Khuloud T Al-Jamal. Plasmid DNA ionisable lipid nanoparticles as non-inert carriers and potent immune activators for cancer immunotherapy.
Journal of controlled release : official journal of the Controlled Release Society.
2024 May; 369(?):251-265. doi:
10.1016/j.jconrel.2024.03.018. [PMID: 38493950] - Anabella Varela, Carlos F Marfil, Sebastián Gomez Talquenca, Ariel Fontana, Sebastian Asurmendi, Fernando Buscema, Federico J Berli. Three-year study of DNA cytosine methylation dynamics in transplanted Malbec grapevines.
Plant science : an international journal of experimental plant biology.
2024 May; 342(?):112037. doi:
10.1016/j.plantsci.2024.112037. [PMID: 38367820] - Bin Zhao, Albert Kamanzi, Yao Zhang, Karen Y T Chan, Madelaine Robertson, Sabrina Leslie, Pieter R Cullis. Determination of the interior pH of lipid nanoparticles using a pH-sensitive fluorescent dye-based DNA probe.
Biosensors & bioelectronics.
2024 May; 251(?):116065. doi:
10.1016/j.bios.2024.116065. [PMID: 38330772] - Tommaso Campani, Silvia Casini, Andrea Maccantelli, Filippo Tosoni, Antonella D'Agostino, Ilaria Caliani. Oxidative stress and DNA alteration on the earthworm Eisenia fetida exposed to four commercial pesticides.
Environmental science and pollution research international.
2024 May; 31(24):35969-35978. doi:
10.1007/s11356-024-33511-7. [PMID: 38743332] - Islam Seder, Tao Zheng, Jing Zhang, César Cruz Rojas, Seyed Hossein Helalat, Rodrigo Coronel Téllez, Yi Sun. A Scalable Microfluidic Platform for Nanoparticle Formulation: For Exploratory- and Industrial-Level Scales.
Nano letters.
2024 May; 24(17):5132-5138. doi:
10.1021/acs.nanolett.3c05057. [PMID: 38588326] - Kang Zhou, Hui Zhou. Distribution patterns and functional diversity of DNA viruses determined by ecological niches in huge river ecosystems.
Virology.
2024 05; 593(?):110015. doi:
10.1016/j.virol.2024.110015. [PMID: 38359578] - Pedro Iván Huerta-Venegas, Javier Raya-González, León Francisco Ruíz-Herrera, José López-Bucio. PHYTOCHROME A controls the DNA damage response and cell death tolerance within the Arabidopsis root meristem.
Plant, cell & environment.
2024 May; 47(5):1513-1525. doi:
10.1111/pce.14831. [PMID: 38251425] - Guangrun Wang, Changlin Li, Liuchun Yuan, Jiefeng Peng, Xiaoyu Xian, Xiaodan Liang, Xiaojun Chang, Liang Lin. DNA Family: Boosting Weight-Sharing NAS With Block-Wise Supervisions.
IEEE transactions on pattern analysis and machine intelligence.
2024 May; 46(5):2722-2740. doi:
10.1109/tpami.2023.3335261. [PMID: 37988208] - Edson Yu Sin Kim, Emanuel Maltempi de Souza, Marcelo Müller-Santos. Optimisation of DNA electroporation protocols for different plant-associated bacteria.
Journal of microbiological methods.
2024 May; 220(?):106912. doi:
10.1016/j.mimet.2024.106912. [PMID: 38452904] - Yong-Ju Huang, Siti Nordahliawate M Sidique, Chinthani S Karandeni Dewage, Lakshmi H Gajula, Georgia K Mitrousia, Aiming Qi, Jonathan S West, Bruce Dl Fitt. Effective control of Leptosphaeria maculans increases importance of L. biglobosa as a cause of phoma stem canker epidemics on oilseed rape.
Pest management science.
2024 May; 80(5):2405-2415. doi:
10.1002/ps.7248. [PMID: 36285624] - Yongfei Liu, Yuhong Lin, Han Xiao, Zhangcheng Fu, Xiaohui Zhu, Xiaoyong Chen, Chunsen Li, Chenyu Ding, Chunhua Lu. mRNA-responsive two-in-one nanodrug for enhanced anti-tumor chemo-gene therapy.
Journal of controlled release : official journal of the Controlled Release Society.
2024 May; 369(?):765-774. doi:
10.1016/j.jconrel.2024.04.007. [PMID: 38593976] - Shilin Sun, Xue Han, Ruoxuan Jin, Junbo Jiao, Jingwen Wang, Siyuan Niu, Ziyao Yang, Di Wu, Yucheng Wang. Generation of CRISPR-edited birch plants without DNA integration using Agrobacterium-mediated transformation technology.
Plant science : an international journal of experimental plant biology.
2024 May; 342(?):112029. doi:
10.1016/j.plantsci.2024.112029. [PMID: 38354755] - Yunsheng Zhang, Nana Ding, Yizhen Li, Min Ouyang, Ping Fu, Yousong Peng, Yongjun Tan. Transcription factor FOXM1 specifies chromatin DNA to extracellular vesicles.
Autophagy.
2024 May; 20(5):1054-1071. doi:
10.1080/15548627.2023.2284523. [PMID: 37974331] - Xiuxiu Cong, Huizhu Tan, Yue Lv, Kuirong Mao, Yanbao Xin, Jialiang Wang, Xiandi Meng, Meng Guan, Haorui Wang, Yong-Guang Yang, Tianmeng Sun. Impacts of cationic lipid-DNA complexes on immune cells and hematopoietic cells in vivo.
Biomaterials science.
2024 Apr; 12(9):2381-2393. doi:
10.1039/d4bm00148f. [PMID: 38500446] - Xinyu Li, Yuanjie Liu, Yunpeng Fan, Gang Tian, Bo Shen, Songzhi Zhang, Xuhuai Fu, Wen He, Xingyu Tao, Xiaojuan Ding, Xinmin Li, Shijia Ding. Advanced Nanoencapsulation-Enabled Ultrasensitive Analysis: Unraveling Tumor Extracellular Vesicle Subpopulations for Differential Diagnosis of Hepatocellular Carcinoma via DNA Cascade Reactions.
ACS nano.
2024 Apr; 18(17):11389-11403. doi:
10.1021/acsnano.4c01310. [PMID: 38628141] - Jianan Zhao, Lingxia Xu, Kai Wei, Ping Jiang, Cen Chang, Linshuai Xu, Yiming Shi, Yixin Zheng, Yu Shan, Yuejuan Zheng, Yi Shen, Jia Liu, Shicheng Guo, Rongsheng Wang, Dongyi He. Identification of clinical characteristics biomarkers for rheumatoid arthritis through targeted DNA methylation sequencing.
International immunopharmacology.
2024 Apr; 131(?):111860. doi:
10.1016/j.intimp.2024.111860. [PMID: 38508093] - Xisen Cao, Linlin Tang, Jie Song. Circular Single-Stranded DNA: Discovery, Biological Effects, and Applications.
ACS synthetic biology.
2024 Apr; 13(4):1038-1058. doi:
10.1021/acssynbio.4c00040. [PMID: 38501391] - Li Zhang, Qian Liu, Yongcan Guo, Luyao Tian, Kena Chen, Dan Bai, Hongyan Yu, Xiaole Han, Wang Luo, Tong Feng, Shixiong Deng, Guoming Xie. DNA-based molecular classifiers for the profiling of gene expression signatures.
Journal of nanobiotechnology.
2024 Apr; 22(1):189. doi:
10.1186/s12951-024-02445-0. [PMID: 38632615] - Xialin Zhang, Mette Galsgaard Malle, Rasmus P Thomsen, Rasmus Schøler Sørensen, Emily Winther Sørensen, Nikos S Hatzakis, Jørgen Kjems. Deconvoluting the Effect of Cell-Penetrating Peptides for Enhanced and Controlled Insertion of Large-Scale DNA Nanopores.
ACS applied materials & interfaces.
2024 Apr; 16(15):18422-18433. doi:
10.1021/acsami.3c18636. [PMID: 38573069] - Jennifer Gilbert, Federica Sebastiani, Marianna Yanez Arteta, Ann Terry, Anna Fornell, Robert Russell, Najet Mahmoudi, Tommy Nylander. Evolution of the structure of lipid nanoparticles for nucleic acid delivery: From in situ studies of formulation to colloidal stability.
Journal of colloid and interface science.
2024 Apr; 660(?):66-76. doi:
10.1016/j.jcis.2023.12.165. [PMID: 38241872] - Mesele Tilahun Belete, Se Eun Kim, Workitu Firmosa Gudeta, Davaajargal Igori, Jeong A Kwon, Su-Heon Lee, Jae Sun Moon. Deciphering the virome of Chunkung (Cnidium officinale) showing dwarfism-like symptoms via a high-throughput sequencing analysis.
Virology journal.
2024 04; 21(1):86. doi:
10.1186/s12985-024-02361-7. [PMID: 38622686] - Phanupong Changtor, Pablo Rodriguez-Mateos, Kittisak Buddhachat, Wandee Wattanachaiyingcharoen, Alexander Iles, Sutthichat Kerdphon, Nonglak Yimtragool, Nicole Pamme. Integration of IFAST-based nucleic acid extraction and LAMP for on-chip rapid detection of Agroathelia rolfsii in soil.
Biosensors & bioelectronics.
2024 Apr; 250(?):116051. doi:
10.1016/j.bios.2024.116051. [PMID: 38301544] - Runze Bao, Huiling Guo, Yungang Liang, Kai Tang, Fuying Feng, Jianyu Meng. Terrihabitans rhizophilus sp. nov., isolated from the rhizosphere soil of plant in temperate semi-arid steppe.
Antonie van Leeuwenhoek.
2024 Apr; 117(1):67. doi:
10.1007/s10482-024-01966-w. [PMID: 38607451] - Saima Jadoon, Qurban Ali, Adnan Sami, Muhammad Zeeshan Haider, Muhammad Ashfaq, Muhammad Arshad Javed, Mudassar Ali Khan. DNA damage in inhabitants exposed to heavy metals near Hudiara drain, Lahore, Pakistan.
Scientific reports.
2024 04; 14(1):8408. doi:
10.1038/s41598-024-58655-x. [PMID: 38600156] - Xi Zhou, Yingying Cao, Xiaocui Huang, Shuqian Qiu, Xinran Xiang, Huimin Niu, Li Chen, Shuiliang Wang, Zhenyu Lin, Shenghang Zhang. Screening and Application of DNA Aptamers for Heparin-Binding Protein.
Molecules (Basel, Switzerland).
2024 Apr; 29(8):. doi:
10.3390/molecules29081717. [PMID: 38675537] - Baoming Shen, Airong Shen, Lina Liu, Yun Tan, Sainan Li, Zhuming Tan. Assembly and comparative analysis of the complete multichromosomal mitochondrial genome of Cymbidium ensifolium, an orchid of high economic and ornamental value.
BMC plant biology.
2024 Apr; 24(1):255. doi:
10.1186/s12870-024-04962-4. [PMID: 38594641] - Mark P Nelder, Rachel Schats, Hendrik N Poinar, Amanda Cooke, Megan B Brickley. Pathogen prospecting of museums: Reconstructing malaria epidemiology.
Proceedings of the National Academy of Sciences of the United States of America.
2024 Apr; 121(15):e2310859121. doi:
10.1073/pnas.2310859121. [PMID: 38527214] - Alex Harkess, Adam J Bewick, Zefu Lu, Paul Fourounjian, Todd P Michael, Robert J Schmitz, Blake C Meyers. The unusual predominance of maintenance DNA methylation in Spirodela polyrhiza.
G3 (Bethesda, Md.).
2024 04; 14(4):. doi:
10.1093/g3journal/jkae004. [PMID: 38190722] - Sarfaraz Hussain, Bowen Tai, Maratab Ali, Israt Jahan, Suha Sakina, Gang Wang, Xinlong Zhang, Yixuan Yin, Fuguo Xing. Antifungal potential of lipopeptides produced by the Bacillus siamensis Sh420 strain against Fusarium graminearum.
Microbiology spectrum.
2024 Apr; 12(4):e0400823. doi:
10.1128/spectrum.04008-23. [PMID: 38451229] - Mingming Sun, Qi Feng, Qi Yan, Huifang Zhao, Haiyan Wang, Shuai Zhang, Changliang Shan, Shuangping Liu, Jiyan Wang, Hongyan Zhai. Malate, a natural inhibitor of 6PGD, improves the efficacy of chemotherapy in lung cancer.
Lung cancer (Amsterdam, Netherlands).
2024 Apr; 190(?):107541. doi:
10.1016/j.lungcan.2024.107541. [PMID: 38531154] - Yu-He Ma, Yue Liu, Tao Li, Zi-Qiang Xu, Jin-Jun Chai, Ang Liu, Qiu-He Ma, Li-Jun Gao, Ming-Cheng Li. An experimental study on the visual identification of Fritillaria ussuriensis based on LAMP and nucleic acid colloidal gold technique.
Analytical biochemistry.
2024 04; 687(?):115430. doi:
10.1016/j.ab.2023.115430. [PMID: 38147947] - Nicola Schmidt, Katharina Sielemann, Sarah Breitenbach, Jörg Fuchs, Boas Pucker, Bernd Weisshaar, Daniela Holtgräwe, Tony Heitkam. Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets.
The Plant journal : for cell and molecular biology.
2024 Apr; 118(1):171-190. doi:
10.1111/tpj.16599. [PMID: 38128038] - Rongxing Liu, Jin Zhang, Fernando Rodrigues Lima, Jinhao Zeng, Qing Nian. Targeting neutrophil extracellular traps: A novel strategy in hematologic malignancies.
Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.
2024 Apr; 173(?):116334. doi:
10.1016/j.biopha.2024.116334. [PMID: 38422658] - Giang Thi Ha Vu, Hieu Xuan Cao, Martin Hofmann, Wilfried Steiner, Oliver Gailing. Uncovering epigenetic and transcriptional regulation of growth in Douglas-fir: identification of differential methylation regions in mega-sized introns.
Plant biotechnology journal.
2024 Apr; 22(4):863-875. doi:
10.1111/pbi.14229. [PMID: 37984804] - Rui-Mo Zhao, Qin-Fang Zhang, Xiao-Li Tian, Jia-Jia Chen, Xiao-Qi Yu, Ji Zhang. ROS-Responsive Bola-Lipid Nanoparticles as a Codelivery System for Gene/Photodynamic Combination Therapy.
Molecular pharmaceutics.
2024 Apr; 21(4):2012-2024. doi:
10.1021/acs.molpharmaceut.4c00053. [PMID: 38497779] - Jiayu Yin, Shuang Wu, Yongli Yang, Delu Wang, Yue Ma, Yongtian Zhao, Sujitraj Sheth, Honglin Huang, Baoan Song, Zhuo Chen. In Addition to Damaging the Plasma Membrane, Phenolic Monoterpenoid Carvacrol Can Bind to the Minor Groove of DNA of Phytopathogenic Fungi to Potentially Control Tea Leaf Spot Caused by Lasiodiplodia theobromae.
Phytopathology.
2024 Apr; 114(4):700-716. doi:
10.1094/phyto-07-23-0263-r. [PMID: 37856707] - Xiaomin Shen, Yue Peng, Haixia Zhou, Xiaoxia Ye, Zhong Han, Xiangchao Shi. A Pt(II) complex bearing N-heterocycle ring induced ferroptotic cell death in ovarian cancer.
Journal of inorganic biochemistry.
2024 04; 253(?):112502. doi:
10.1016/j.jinorgbio.2024.112502. [PMID: 38335582] - Huili Wu, Qing Geng, Wenxiang Shi, Chenjie Qiu. Comprehensive pan-cancer analysis reveals CCDC58 as a carcinogenic factor related to immune infiltration.
Apoptosis : an international journal on programmed cell death.
2024 Apr; 29(3-4):536-555. doi:
10.1007/s10495-023-01919-0. [PMID: 38066393] - Tanjina Bari, Md Abdullah Al Mamun, Hayley Toet, Vignesh Rathinasamy, Jo-Ann Larkins, Travis Beddoe, Terry W Spithill, David Piedrafita, Andrew R Greenhill. Evaluation of LAMP for Fasciola hepatica detection from faecal samples of experimentally and naturally infected cattle.
Veterinary parasitology.
2024 Apr; 327(?):110132. doi:
10.1016/j.vetpar.2024.110132. [PMID: 38280252] - Da Sun, Wenyu Sun, Song-Qi Gao, Jonathan Lehrer, Hong Wang, Ryan Hall, Zheng-Rong Lu. Intravitreal Delivery of PEGylated-ECO Plasmid DNA Nanoparticles for Gene Therapy of Stargardt Disease.
Pharmaceutical research.
2024 Apr; 41(4):807-817. doi:
10.1007/s11095-024-03679-1. [PMID: 38443629] - Dechang Cao. RNA-directed DNA methylation as a weapon in parental conflict.
Plant physiology.
2024 Mar; 194(4):1931-1933. doi:
10.1093/plphys/kiad664. [PMID: 38095352] - Joan Candela-Ferre, Borja Diego-Martin, Jaime Pérez-Alemany, Javier Gallego-Bartolomé. Mind the gap: Epigenetic regulation of chromatin accessibility in plants.
Plant physiology.
2024 Mar; 194(4):1998-2016. doi:
10.1093/plphys/kiae024. [PMID: 38236303] - Xiangmei Cao, Xinzhao Li, Yike Su, Chi Zhang, Chunyan Wei, Kunsong Chen, Donald Grierson, Bo Zhang. Transcription factor PpNAC1 and DNA demethylase PpDML1 synergistically regulate peach fruit ripening.
Plant physiology.
2024 Mar; 194(4):2049-2068. doi:
10.1093/plphys/kiad627. [PMID: 37992120] - Zhongqing Wen, Zhoukang Zhuang, Huiming Liu, Zilong Wang, Xueqiong Feng, Xiangcheng Zhu, Xiaohui Yan, Yanwen Duan, Yong Huang. DNA Interaction and Cleavage Modes of Anthraquinone-Fused Enediynes: A Study on Tiancimycins, Yangpumicins, and Their Semisynthetic Analogues.
Journal of medicinal chemistry.
2024 Mar; 67(6):4624-4640. doi:
10.1021/acs.jmedchem.3c02049. [PMID: 38483132] - Irina P Starodumova, Lubov V Dorofeeva, Natalia V Prisyazhnaya, Sergey V Tarlachkov, Oleg V Vasilenko, Alexander N Avtukh, Yury V Ospennikov, Sergei A Subbotin, Lyudmila I Evtushenko. Rathayibacter tanaceti sp. nov., a Novel Actinobacterium from Tanacetum vulgare Infested by Foliar Nematode Aphelenchoides sp.
Current microbiology.
2024 Mar; 81(5):123. doi:
10.1007/s00284-024-03643-7. [PMID: 38538917] - Yimeng Fang, Xu Hua, Chun-Min Shan, Takenori Toda, Feng Qiao, Zhiguo Zhang, Songtao Jia. Coordination of histone chaperones for parental histone segregation and epigenetic inheritance.
Genes & development.
2024 Mar; 38(3-4):189-204. doi:
10.1101/gad.351278.123. [PMID: 38479839] - Suresh Kumar, Trilochan Mohapatra. Epigenetic Modifications in Genome Help Remembering the Stress Tolerance Strategy Adopted by the Plant.
Frontiers in bioscience (Landmark edition).
2024 Mar; 29(3):126. doi:
10.31083/j.fbl2903126. [PMID: 38538276] - Lijuan Luo, Fang Dong, Dandan Li, Xinmin Li, Xinyu Li, Yunpeng Fan, Caihong Qi, Jinyong Luo, Li Li, Bo Shen. Enhancing 3D DNA Walker-Induced CRISPR/Cas12a Technology for Highly Sensitive Detection of ExomicroRNA Associated with Osteoporosis.
ACS sensors.
2024 Mar; 9(3):1438-1446. doi:
10.1021/acssensors.3c02533. [PMID: 38451610] - Yujuan Yang, Xiangxiang Kong, Jielin Yang, Junxin Xue, Bing Niu, Qin Chen. Rapid Nucleic Acid Detection of Listeria monocytogenes Based on RAA-CRISPR Cas12a System.
International journal of molecular sciences.
2024 Mar; 25(6):. doi:
10.3390/ijms25063477. [PMID: 38542449] - Yong-Hao Ma, Yan Zhu, Hui Wu, Yao He, Qiang Zhang, Qiuling Huang, Zhimin Wang, Hang Xing, Liping Qiu, Weihong Tan. Domain-Targeted Membrane Partitioning of Specific Proteins with DNA Nanodevices.
Journal of the American Chemical Society.
2024 Mar; 146(11):7640-7648. doi:
10.1021/jacs.3c13966. [PMID: 38466380] - Patrick Jung, Laura Briegel-Williams, Lina Werner, Emily Jost, Matthias Schultz, Dennis J Nürnberg, Martin Grube, Michael Lakatos. A direct PCR approach with low-biomass insert opens new horizons for molecular sciences on cryptogam communities.
Applied and environmental microbiology.
2024 Mar; 90(3):e0002424. doi:
10.1128/aem.00024-24. [PMID: 38349146] - Xin Jin, Zemin Wang, Qianyi Ai, Xuan Li, Jiangwei Yang, Ning Zhang, Huaijun Si. DNA-Binding with One Finger (Dof) Transcription Factor Gene Family Study Reveals Differential Stress-Responsive Transcription Factors in Contrasting Drought Tolerance Potato Species.
International journal of molecular sciences.
2024 Mar; 25(6):. doi:
10.3390/ijms25063488. [PMID: 38542463] - Sarita Maurya, Manish Gaur, Mohd Sohail Akhtar, Awadh Bihari Yadav. Evaluation of Drug-Loaded and Surface-Adsorbed DNase/Tween-80 Solid Lipid Nanoparticles against Staphylococcus aureus Biofilms.
ACS applied bio materials.
2024 Mar; 7(3):1501-1512. doi:
10.1021/acsabm.3c00887. [PMID: 38418375] - Jundong Zhuang, Yaoxin Zhang, Congcong Zhou, Danlin Fan, Tao Huang, Qi Feng, Yiqi Lu, Yan Zhao, Qiang Zhao, Bin Han, Tingting Lu. Dynamics of extrachromosomal circular DNA in rice.
Nature communications.
2024 Mar; 15(1):2413. doi:
10.1038/s41467-024-46691-0. [PMID: 38499575] - Yang Liu, Zhengrong Zhangding, Xuhao Liu, Tingting Gan, Chen Ai, Jinchun Wu, Haoxin Liang, Mohan Chen, Yuefeng Guo, Rusen Lu, Yongpeng Jiang, Xiong Ji, Ning Gao, Daochun Kong, Qing Li, Jiazhi Hu. Fork coupling directs DNA replication elongation and termination.
Science (New York, N.Y.).
2024 Mar; 383(6688):1215-1222. doi:
10.1126/science.adj7606. [PMID: 38484065] - Yinu Wang, Xiaolei Situ, Horacio Cardenas, Ellie Siu, Sayedabdulrazzaq A Alhunayan, Russell Keathley, Edward Tanner, Jian-Jun Wei, Yuying Tan, Chinmayee Vallabh Prabhu Dessai, Ji-Xin Cheng, Daniela Matei. Preclinical Evaluation of NTX-301, a Novel DNA Hypomethylating Agent in Ovarian Cancer.
Clinical cancer research : an official journal of the American Association for Cancer Research.
2024 Mar; 30(6):1175-1188. doi:
10.1158/1078-0432.ccr-23-2368. [PMID: 38231483] - Maja Illig, Kevin Jahnke, Lukas P Weise, Marlene Scheffold, Ulrike Mersdorf, Hauke Drechsler, Yixin Zhang, Stefan Diez, Jan Kierfeld, Kerstin Göpfrich. Triggered contraction of self-assembled micron-scale DNA nanotube rings.
Nature communications.
2024 Mar; 15(1):2307. doi:
10.1038/s41467-024-46339-z. [PMID: 38485920] - Hui-Min Hua, Jia-Feng Xu, Xue-Shuang Huang, Andrei A Zimin, Wen-Fang Wang, Yin-Hua Lu. Low-Toxicity and High-Efficiency Streptomyces Genome Editing Tool Based on the Miniature Type V-F CRISPR/Cas Nuclease AsCas12f1.
Journal of agricultural and food chemistry.
2024 Mar; 72(10):5358-5367. doi:
10.1021/acs.jafc.3c09101. [PMID: 38427033] - Yinzi Jiang, Junbo Yang, Ryan A Folk, Jianli Zhao, Jie Liu, Zhengshan He, Hua Peng, Shixiong Yang, Chunlei Xiang, Xiangqin Yu. Species delimitation of tea plants (Camellia sect. Thea) based on super-barcodes.
BMC plant biology.
2024 Mar; 24(1):181. doi:
10.1186/s12870-024-04882-3. [PMID: 38468197] - Flavio Aliaga, Mario Zapata-Cruz, Silvia Ana Valverde-Zavaleta. Plastid genome of Chenopodium petiolare from Trujillo, Peru.
BMC research notes.
2024 Mar; 17(1):69. doi:
10.1186/s13104-024-06705-y. [PMID: 38468356] - Paige Bristow, Kyle Schantz, Zoe Moosbrugger, Kailey Martin, Haley Liebenberg, Stefan Steimle, Qi Xiao, Virgil Percec, Samantha E Wilner. Aptamer-Targeted Dendrimersomes Assembled from Azido-Modified Janus Dendrimers 'Clicked' to DNA.
Biomacromolecules.
2024 Mar; 25(3):1541-1549. doi:
10.1021/acs.biomac.3c01108. [PMID: 38394608] - Haixing Li, Zhiyu Lin, Xinyue Guo, Zhenkang Pan, Hao Pan, Dongying Wang. Primer extension refractory PCR: an efficient and reliable genome walking method.
Molecular genetics and genomics : MGG.
2024 Mar; 299(1):27. doi:
10.1007/s00438-024-02126-5. [PMID: 38466442] - Chun-Kai Huang, Yi-Nan Lin, Wen-Shan Huang, Satyajyoti Senapati, Hsueh-Chia Chang, Yi-Ming Sun, Li-Fen Huang. RNA-based detection of genetically modified plants via current-voltage characteristic measurement.
Journal of biotechnology.
2024 Mar; 383(?):27-38. doi:
10.1016/j.jbiotec.2024.02.002. [PMID: 38336281] - Bisho Ram Lawaju, Guiping Yan. Assessment of Common Factors Associated with Droplet Digital PCR (ddPCR) Quantification of Paratrichodorus allius in Soil.
International journal of molecular sciences.
2024 Mar; 25(6):. doi:
10.3390/ijms25063104. [PMID: 38542075] - Chen Li, Xiaorong Feng, Songhang Li, Xing He, Zeli Luo, Xia Cheng, Jie Yao, Jie Xiao, Xiaofei Wang, Dingke Wen, Duanya Liu, Yanfei Li, Hong Zhou, Lu Ma, Tongyu Lin, Xiaoxiao Cai, Yunfeng Lin, Lu Guo, Mu Yang. Tetrahedral DNA loaded siCCR2 restrains M1 macrophage polarization to ameliorate pulmonary fibrosis in chemoradiation-induced murine model.
Molecular therapy : the journal of the American Society of Gene Therapy.
2024 Mar; 32(3):766-782. doi:
10.1016/j.ymthe.2024.01.022. [PMID: 38273656] - Philippe Rieu, Veronica Maria Beretta, Francesca Caselli, Emmanuel Thévénon, Jérémy Lucas, Mahmoud Rizk, Emanuela Franchini, Elisabetta Caporali, Chiara Paleni, Max H Nanao, Martin M Kater, Renaud Dumas, Chloe Zubieta, François Parcy, Veronica Gregis. The ALOG domain defines a family of plant-specific transcription factors acting during Arabidopsis flower development.
Proceedings of the National Academy of Sciences of the United States of America.
2024 Mar; 121(10):e2310464121. doi:
10.1073/pnas.2310464121. [PMID: 38412122] - Zelu Wang, Wenhui Cheng, Zhiyu Dong, Xiamei Yao, Xu Deng, Chun Ou. A CRISPR/LbCas12a-based method for detection of bacterial fruit blotch pathogens in watermelon.
Microbiology spectrum.
2024 Mar; 12(3):e0384623. doi:
10.1128/spectrum.03846-23. [PMID: 38299831] - Yeliang Dai, Jibing Li, Shuang Wang, Xixi Cai, Xuan Zhao, Xianghui Cheng, Qihui Huang, Xiumin Yang, Chunling Luo, Gan Zhang. Unveiling the synergistic mechanism of autochthonous fungal bioaugmentation and ammonium nitrogen biostimulation for enhanced phenanthrene degradation in oil-contaminated soils.
Journal of hazardous materials.
2024 Mar; 465(?):133293. doi:
10.1016/j.jhazmat.2023.133293. [PMID: 38141301] - Amanda Silva Fernandes, Abel Vieira de Melo Bisneto, Luana Santos Silva, Elisa Flávia Luiz Cardoso Bailão, Clever Gomes Cardoso, Cristiene Costa Carneiro, Suzana da Costa Santos, Lee Chen-Chen. Tellimagrandin-I and camptothin a exhibit chemopreventive effects in Salmonella enterica serovar Typhimurium strains and human lymphocytes.
Journal of toxicology and environmental health. Part A.
2024 03; 87(5):185-198. doi:
10.1080/15287394.2023.2290641. [PMID: 38073488] - Jibing Li, Chunling Luo, Xixi Cai, Yeliang Dai, Dayi Zhang, Gan Zhang. Cultivation and characterization of functional-yet-uncultivable phenanthrene degraders by stable-isotope-probing and metagenomic-binning directed cultivation (SIP-MDC).
Environment international.
2024 Mar; 185(?):108555. doi:
10.1016/j.envint.2024.108555. [PMID: 38458119] - Johanna Walther, Deja Porenta, Danny Wilbie, Cornelis Seinen, Naomi Benne, Qiangbing Yang, Olivier Gerrit de Jong, Zhiyong Lei, Enrico Mastrobattista. Comparative analysis of lipid Nanoparticle-Mediated delivery of CRISPR-Cas9 RNP versus mRNA/sgRNA for gene editing in vitro and in vivo.
European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V.
2024 Mar; 196(?):114207. doi:
10.1016/j.ejpb.2024.114207. [PMID: 38325664] - Tianran Zhang, Chao Huang, Yanni Jiao, Lijun Shao, Dafeng Jiang, Fenghua Li, Wei Li, Xibao Gao. ICP-MS and fluorescence dual-mode detection of ZIKV-RNA based on quantum dot labeling with hybridization chain reaction.
Talanta.
2024 Mar; 269(?):125463. doi:
10.1016/j.talanta.2023.125463. [PMID: 38016323] - Xiwen Sun, Rong Lei, Haipeng Zhang, Wujian Chen, Qianwen Jia, Xing Guo, Yongjiang Zhang, Pinshan Wu, Xinyi Wang. Rapid and sensitive detection of two fungal pathogens in soybeans using the recombinase polymerase amplification/CRISPR-Cas12a method for potential on-site disease diagnosis.
Pest management science.
2024 Mar; 80(3):1168-1181. doi:
10.1002/ps.7847. [PMID: 37874890] - Lanfang Hu, Xingyan Tan, Lingli Lu, Xiangtian Meng, Yaying Li, Huaiying Yao. DNA-SIP delineates unique microbial communities in the rhizosphere of the hyperaccumulator Sedum alfredii which are beneficial to Cd phytoextraction.
Ecotoxicology and environmental safety.
2024 Mar; 272(?):116016. doi:
10.1016/j.ecoenv.2024.116016. [PMID: 38301580] - Mojtaba Baharsaadi, Maryam Hezavehei, Abdolhossein Shahverdi, Iman Halvaei. Evaluation of the effects of hydroxytyrosol on human sperm parameters during cryopreservation.
Cryobiology.
2024 03; 114(?):104840. doi:
10.1016/j.cryobiol.2023.104840. [PMID: 38104853] - Bharati Pandey, Abhinav Grover. Mechanistic and structural insight into R2R3-MYB transcription factor in plants: molecular dynamics based binding free energy analysis.
Journal of biomolecular structure & dynamics.
2024 Mar; 42(5):2632-2642. doi:
10.1080/07391102.2023.2206911. [PMID: 37154800] - Seigo Kimura, Hideyoshi Harashima. Nano-Bio Interactions: Exploring the Biological Behavior and the Fate of Lipid-Based Gene Delivery Systems.
BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy.
2024 Mar; 38(2):259-273. doi:
10.1007/s40259-024-00647-4. [PMID: 38345754] - Zhiying Wang, Bo Yan, Yali Ni, Yafei Cao, Jie Qiu, Rui He, Yan Dong, Man Hao, Weikai Wang, Cheng Wang, Haixiang Su, Bin Yi, Lingqian Chang. A portable, integrated microfluidics for rapid and sensitive diagnosis of Streptococcus agalactiae in resource-limited environments.
Biosensors & bioelectronics.
2024 Mar; 247(?):115917. doi:
10.1016/j.bios.2023.115917. [PMID: 38101186] - Zi Liu, Guoxiang Rong, Hui Dong, Yintang Zhang, Maotian Xu, Baoxian Ye, Yanli Zhou. Ratiometric electrochemical biosensor based on lateral movement of multi-pedal DNA tetrahedron machine on biomimetic interface.
Talanta.
2024 Mar; 269(?):125454. doi:
10.1016/j.talanta.2023.125454. [PMID: 38029606] - Yongsheng Ma, Qitai Lin, Wenming Yang, Yang Liu, Yugang Xing, Zhiyuan Ren, Xueding Wang, Raorao Zhou, Gaige Wu, Pengcui Li, Wangping Duan, Xiaoling Zhang, Xiaochun Wei. High-Speed Centrifugation Efficiently Removes Immunogenic Elements in Osteochondral Allografts.
Orthopaedic surgery.
2024 Mar; 16(3):675-686. doi:
10.1111/os.13991. [PMID: 38238250] - Manish Kumar Gupta, Sanjana Senthilkumar, Latha Rangan. 3, 5-Dihydroxy 4', 7-dimethoxyflavone-DNA interaction study for nucleic acid detection and differential cell staining.
International journal of biological macromolecules.
2024 Mar; 261(Pt 1):129713. doi:
10.1016/j.ijbiomac.2024.129713. [PMID: 38281518] - Xue Bai, Kaili Yu, Shijiao Xiong, Jin Chen, Yi Yang, Xinhai Ye, Hongwei Yao, Fang Wang, Qi Fang, Qisheng Song, Gongyin Ye. CRISPR/Cas9-mediated mutagenesis of the white gene in an ectoparasitic wasp, Habrobracon hebetor.
Pest management science.
2024 Mar; 80(3):1219-1227. doi:
10.1002/ps.7851. [PMID: 37899674] - Amir Osman Abdelrazig, Patsamon Rijiravanich, Sawita Suwannarat, Werasak Surareungchai, Mithran Somasundrum. Detection of DNA using gold nanoparticle-coated silica nanoparticles.
Analytical biochemistry.
2024 03; 686(?):115411. doi:
10.1016/j.ab.2023.115411. [PMID: 38070665]