3-Hydroxyvaleric acid (BioDeep_00000016928)

Main id: BioDeep_00000017769

 

PANOMIX_OTCML-2023


代谢物信息卡片


3-Hydroxypentanoic acid

化学式: C5H10O3 (118.06299100000001)
中文名称: rac-3-羟基戊酸
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CCC(CC(=O)O)O
InChI: InChI=1S/C5H10O3/c1-2-4(6)3-5(7)8/h4,6H,2-3H2,1H3,(H,7,8)

描述信息

3-Hydroxyvaleric acid is a 5-carbon ketone body. 3-Hydroxyvaleric acid is anaplerotic, meaning it can refill the pool of TCA cycle intermediates.

同义名列表

2 个代谢物同义名

3-Hydroxypentanoic acid; 3-Hydroxyvaleric acid



数据库引用编号

10 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

6 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。



文献列表

  • Justyna Możejko-Ciesielska, Krzysztof Moraczewski, Sylwester Czaplicki. Halomonas alkaliantarctica as a platform for poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production from biodiesel-derived glycerol. Environmental microbiology reports. 2024 Feb; 16(1):e13225. doi: 10.1111/1758-2229.13225. [PMID: 38146695]
  • Jose Gustavo De la Ossa, Serena Danti, Jasmine Esposito Salsano, Bahareh Azimi, Veronika Tempesti, Niccoletta Barbani, Maria Digiacomo, Marco Macchia, Mohammed Jasim Uddin, Caterina Cristallini, Rossella Di Stefano, Andrea Lazzeri. Electrospun Poly(3-Hydroxybutyrate-Co-3-Hydroxyvalerate)/Olive Leaf Extract Fiber Mesh as Prospective Bio-Based Scaffold for Wound Healing. Molecules (Basel, Switzerland). 2022 Sep; 27(19):. doi: 10.3390/molecules27196208. [PMID: 36234738]
  • P Benesova, D Kucera, I Marova, S Obruca. Chicken feather hydrolysate as an inexpensive complex nitrogen source for PHA production by Cupriavidus necator on waste frying oils. Letters in applied microbiology. 2017 Aug; 65(2):182-188. doi: 10.1111/lam.12762. [PMID: 28585326]
  • Osvaldo D Frutos, Irene Cortes, Sara Cantera, Esther Arnaiz, Raquel Lebrero, Raúl Muñoz. Nitrous Oxide Abatement Coupled with Biopolymer Production As a Model GHG Biorefinery for Cost-Effective Climate Change Mitigation. Environmental science & technology. 2017 Jun; 51(11):6319-6325. doi: 10.1021/acs.est.7b00643. [PMID: 28467840]
  • Waikhom Gangotri, Ruchi Jain-Raina, Shashi B Babbar. Evaluation of guar gum derivatives as gelling agents for microbial culture media. World journal of microbiology & biotechnology. 2012 May; 28(5):2279-85. doi: 10.1007/s11274-012-1027-0. [PMID: 22806052]
  • Kanokphorn Sangkharak, Poonsuk Prasertsan. Screening and identification of polyhydroxyalkanoates producing bacteria and biochemical characterization of their possible application. The Journal of general and applied microbiology. 2012; 58(3):173-82. doi: 10.2323/jgam.58.173. [PMID: 22878735]
  • J-Y Chee, N-S Lau, M-R Samian, T Tsuge, K Sudesh. Expression of Aeromonas caviae polyhydroxyalkanoate synthase gene in Burkholderia sp. USM (JCM15050) enables the biosynthesis of SCL-MCL PHA from palm oil products. Journal of applied microbiology. 2012 Jan; 112(1):45-54. doi: 10.1111/j.1365-2672.2011.05189.x. [PMID: 22054430]
  • Anthony D Maher, Lucette A Cysique, Bruce J Brew, Caroline D Rae. Statistical integration of 1H NMR and MRS data from different biofluids and tissues enhances recovery of biological information from individuals with HIV-1 infection. Journal of proteome research. 2011 Apr; 10(4):1737-45. doi: 10.1021/pr1010263. [PMID: 21244037]
  • Stanislav Obruca, Ivana Marova, Ondrej Snajdar, Ludmila Mravcova, Zdenek Svoboda. Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) by Cupriavidus necator from waste rapeseed oil using propanol as a precursor of 3-hydroxyvalerate. Biotechnology letters. 2010 Dec; 32(12):1925-32. doi: 10.1007/s10529-010-0376-8. [PMID: 20814716]
  • Hai-Feng Zhang, Long Ma, Zhi-Hui Wang, Guo-Qiang Chen. Biosynthesis and characterization of 3-hydroxyalkanoate terpolyesters with adjustable properties by Aeromonas hydrophila. Biotechnology and bioengineering. 2009 Oct; 104(3):582-9. doi: 10.1002/bit.22409. [PMID: 19517520]
  • Shuang Deng, Guo-Fang Zhang, Takhar Kasumov, Charles R Roe, Henri Brunengraber. Interrelations between C4 ketogenesis, C5 ketogenesis, and anaplerosis in the perfused rat liver. The Journal of biological chemistry. 2009 Oct; 284(41):27799-27807. doi: 10.1074/jbc.m109.048744. [PMID: 19666922]
  • Paltu Banerjee, Indrajyoti Mukherjee, Subhash Bhattacharya, Sidhhartha Datta, Satya P Moulik, Diptabhas Sarkar. Sorption of water vapor, hydration, and viscosity of carboxymethylhydroxypropyl guar, diutan, and xanthan gums, and their molecular association with and without salts (NaCl, CaCl2, HCOOK, CH3COONa, (NH4)2SO4 and MgSO4) in aqueous solution. Langmuir : the ACS journal of surfaces and colloids. 2009 Oct; 25(19):11647-56. doi: 10.1021/la901259e. [PMID: 19715284]
  • Akhilesh Kumar Singh, Nirupama Mallick. Exploitation of inexpensive substrates for production of a novel SCL-LCL-PHA co-polymer by Pseudomonas aeruginosa MTCC 7925. Journal of industrial microbiology & biotechnology. 2009 Mar; 36(3):347-54. doi: 10.1007/s10295-008-0503-x. [PMID: 19052786]
  • Wing-Hin Lee, Ching-Yee Loo, Christopher T Nomura, Kumar Sudesh. Biosynthesis of polyhydroxyalkanoate copolymers from mixtures of plant oils and 3-hydroxyvalerate precursors. Bioresource technology. 2008 Oct; 99(15):6844-51. doi: 10.1016/j.biortech.2008.01.051. [PMID: 18325764]
  • Lie Li, Deepthi Pabbisetty, Paulo Carvalho, Mitchell A Avery, Bonnie A Avery. Analysis of CoQ10 in rat serum by ultra-performance liquid chromatography mass spectrometry after oral administration. Journal of pharmaceutical and biomedical analysis. 2008 Jan; 46(1):137-42. doi: 10.1016/j.jpba.2007.10.019. [PMID: 18054195]
  • Mazhar Pasha, Swamy Ngn. Derivatization of guar to sodium carboxy methyl hydroxy propyl derivative; characterization and evaluation. Pakistan journal of pharmaceutical sciences. 2008 Jan; 21(1):40-4. doi: ". [PMID: 18166518]
  • Kshama Lakshman, Tumkur Ramachandriah Shamala. Enhanced biosynthesis of polyhydroxyalkanoates in a mutant strain of Rhizobium meliloti. Biotechnology letters. 2003 Jan; 25(2):115-9. doi: 10.1023/a:1021959100432. [PMID: 12882285]
  • C Pozo, M V Martínez-Toledo, B Rodelas, J González-López. Effects of culture conditions on the production of polyhydroxyalkanoates by Azotobacter chroococcum H23 in media containing a high concentration of alpechín (wastewater from olive oil mills) as primary carbon source. Journal of biotechnology. 2002 Aug; 97(2):125-31. doi: 10.1016/s0168-1656(02)00056-1. [PMID: 12067519]
  • I K Kang, S H Choi, D S Shin, S C Yoon. Surface modification of polyhydroxyalkanoate films and their interaction with human fibroblasts. International journal of biological macromolecules. 2001 Mar; 28(3):205-12. doi: 10.1016/s0141-8130(00)00165-3. [PMID: 11251227]
  • V Gorenflo, G Schmack, R Vogel, A Steinbüchel. Development of a process for the biotechnological large-scale production of 4-hydroxyvalerate-containing polyesters and characterization of their physical and mechanical properties. Biomacromolecules. 2001; 2(1):45-57. doi: 10.1021/bm0000992. [PMID: 11749154]
  • A C Eschenlauer, S K Stoup, F Srienc, D A Somers. Production of heteropolymeric polyhydroxyalkanoate in Escherichia coli from a single carbon source. International journal of biological macromolecules. 1996 Aug; 19(2):121-30. doi: 10.1016/0141-8130(96)01114-2. [PMID: 8842775]
  • T W Atkins, S J Peacock. In vitro biodegradation of poly(beta-hydroxybutyrate-hydroxyvalerate) microspheres exposed to Hanks' buffer, newborn calf serum, pancreatin and synthetic gastric juice. Journal of biomaterials science. Polymer edition. 1996; 7(12):1075-84. doi: 10.1163/156856296x00561. [PMID: 8880439]
  • T W Atkins, S J Peacock. The incorporation and release of bovine serum albumin from poly(beta-hydroxybutyrate-hydroxyvalerate) microspheres. Journal of biomaterials science. Polymer edition. 1996; 7(12):1065-73. doi: 10.1163/156856296x00552. [PMID: 8880438]
  • L Powers, S T Ciraolo, K C Agarwal, A Kumar, C Bomont, M V Soloviev, F David, S Desrochers, H Brunengraber. Assay of the enantiomers of 1,2-propanediol, 1,3-butanediol, 1,3-pentanediol, and the corresponding hydroxyacids by gas chromatography-mass spectrometry. Analytical biochemistry. 1994 Sep; 221(2):323-8. doi: 10.1006/abio.1994.1420. [PMID: 7810873]