2-cis,6-cis-farnesyl diphosphate (BioDeep_00000015643)

   


Metabolite Card


(2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate

  Formula: C15H28O7P2 (382.131)
Chinese Names:
  Spectrum Hits: Top Source Homo sapiens(COVID-19)(otcml) 34.4%

Molecular Structure

SMILES: CC(=CCCC(=CCCC(=CCOP(=O)(O)OP(=O)(O)O)C)C)C
InChI: InChI=1S/C15H28O7P2/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-21-24(19,20)22-23(16,17)18/h7,9,11H,5-6,8,10,12H2,1-4H3,(H,19,20)(H2,16,17,18)/b14-9-,15-11-


Description

Synonyms

2 synonym names

2-cis,6-cis-farnesyl diphosphate; (2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate



Cross Reference

7 cross reference id

Classification Terms

Related Pathways

Reactome()

BioCyc()

PlantCyc()

Biological Process

related biological process reactions.

Reactome()

BioCyc()

WikiPathways()

Plant Reactome()

INOH()

PlantCyc()

COVID-19 Disease Map()

PathBank()

PharmGKB()

organism taxonomy source information

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

Sub-cellular location Genes


Literature Reference

  • Jesica R Williams, Anna L Khandoga, Pankaj Goyal, James I Fells, Donna H Perygin, Wolfgang Siess, Abby L Parrill, Gabor Tigyi, Yuko Fujiwara. Unique ligand selectivity of the GPR92/LPA5 lysophosphatidate receptor indicates role in human platelet activation. The Journal of biological chemistry. 2009 Jun; 284(25):17304-17319. doi: 10.1074/jbc.m109.003194. [PMID: 19366702]
  • Da Young Oh, Jung Min Yoon, Mi Jin Moon, Jong-Ik Hwang, Han Choe, Ju Yeon Lee, Jae Il Kim, Sunoh Kim, Hyewhon Rhim, David K O'Dell, J Michael Walker, Heung Sik Na, Min Goo Lee, Hyuk Bang Kwon, Kyungjin Kim, Jae Young Seong. Identification of farnesyl pyrophosphate and N-arachidonylglycine as endogenous ligands for GPR92. The Journal of biological chemistry. 2008 Jul; 283(30):21054-64. doi: 10.1074/jbc.m708908200. [PMID: 18499677]