D-Ribose 5-phosphate (BioDeep_00000014430)

Main id: BioDeep_00000001614

Secondary id: BioDeep_00001868521

human metabolite Endogenous blood metabolite Volatile Flavor Compounds natural product


代谢物信息卡片


{[(2R,3S,4R,5S)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acid

化学式: C5H11O8P (230.0191536)
中文名称: Alpha-D-核糖-5-磷酸, D-核糖-5-磷酸
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C1C(C(C(O1)O)O)O)OP(=O)(O)O
InChI: InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5+/m1/s1

描述信息

D-Ribose 5-phosphate (CAS: 4300-28-1), also known as R-5-P, belongs to the class of organic compounds known as pentose phosphates. These are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups. D-Ribose 5-phosphate exists in all living species, ranging from bacteria to humans. Within humans, D-ribose 5-phosphate participates in a number of enzymatic reactions. In particular, D-ribose 5-phosphate can be biosynthesized from D-ribulose 5-phosphate; which is mediated by the enzyme ribose-5-phosphate isomerase. In addition, D-ribose 5-phosphate can be biosynthesized from D-ribose; which is catalyzed by the enzyme ribokinase. Outside of the human body, D-ribose 5-phosphate has been detected, but not quantified in cow milk and rices. D-Ribose 5-phosphate is both a product and an intermediate of the pentose phosphate pathway. The last step of the oxidative reactions in the pentose phosphate pathway is the production of ribulose 5-phosphate. D-Ribose 5-phosphate is an important intermediate metabolite in the pentose phosphate pathway and in the purine metabolism pathway. The intracellular ribose 5-phosphate concentration is an important determinant of the rate of de novo purine synthesis (PMID:6699001).
D-Ribose 5-phosphate is an important intermediate metabolite in the Pentose phosphate pathway (KEGG, map00030) and in the Purine metabolism pathway (KEGG, map00230).; The intracellular ribose 5-phosphate concentration is an important determinant of the rate of de novo purine synthesis. (PMID 6699001). D-Ribose 5-phosphate is found in rice.
COVID info from COVID-19 Disease Map
KEIO_ID R002
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Coronavirus
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同义名列表

20 个代谢物同义名

{[(2R,3S,4R,5S)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acid; 5-O-Phosphono-alpha-D-ribofuranose; alpha-D-Ribose 5-phosphoric acid; Ribose 5-(dihydrogen phosphate); 5-O-Phosphono-α-D-ribofuranose; 5-O-Phosphono-a-D-ribofuranose; Α-D-ribose 5-phosphoric acid; a-D-Ribose 5-phosphoric acid; D-Ribose 5-phosphoric acid; alpha-D-Ribose 5-phosphate; D-Ribofuranose 5-phosphate; alpha-D-Ribose-5-phosphate; Α-D-ribose 5-phosphate; α-D-Ribose-5-phosphate; a-D-Ribose 5-phosphate; Ribose 5-monophosphate; D-Ribose 5-phosphate; Ribose 5-phosphate; R-5-p; D-Ribose 5-phosphate



数据库引用编号

21 个数据库交叉引用编号

分类词条

相关代谢途径

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代谢反应

4 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(2)

WikiPathways(1)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(1)

PathBank(0)

PharmGKB(0)

10 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。



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